| GenBank top hits | e value | %identity | Alignment |
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| KAA0046492.1 putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa] | 5.0e-58 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETKSRADRKP GVG GRGRGREDGPG KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 5.0e-58 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETKSRADRKP GVG GRGRGREDGPG KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| XP_011659113.1 sm-like protein LSM4 [Cucumis sativus] | 2.9e-58 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGL---KGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETKSRADRKP GVG GRGRGREDGPG+ KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGL---KGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 7.7e-59 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETK+RADRKPPGVG GRGRGREDGPG KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 6.3e-61 | 72.04 | Show/hide |
Query: FTDAAAAVVLQFVPHSLPSSGFARIFYSLLLVVPASRICSVSLK--------------MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM
FT++ +A+ L + P +P AR+ + VV AS +C VSLK MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM
Subjt: FTDAAAAVVLQFVPHSLPSSGFARIFYSLLLVVPASRICSVSLK--------------MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRM
Query: PECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGMGRGFDDGAKTTSGGRGKGGPGGKPVANR
PECYI GN IKYLRVPDEVIDKVQEETKSRADRKPPGVG GRGRGREDGPG KGMGRGFDD AK SGGRGKGGPGGKP ANR
Subjt: PECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGMGRGFDDGAKTTSGGRGKGGPGGKPVANR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K9I4 U6 snRNA-associated Sm-like protein LSm4 | 1.4e-58 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGL---KGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETKSRADRKP GVG GRGRGREDGPG+ KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGL---KGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 2.6e-60 | 80.65 | Show/hide |
Query: VVPASRICSVSLK--------------MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRA
VV AS +C +SLK MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETKSRA
Subjt: VVPASRICSVSLK--------------MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRA
Query: DRKPPGVGHGRGRGREDGPGL---KGMGRGFDDGAKTTSGGRGKGGPGGKPVANR
DRKP GVG GRGRGREDGPG+ KGMGRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: DRKPPGVGHGRGRGREDGPGL---KGMGRGFDDGAKTTSGGRGKGGPGGKPVANR
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 2.4e-58 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETKSRADRKP GVG GRGRGREDGPG KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 3.7e-59 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETK+RADRKPPGVG GRGRGREDGPG KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 3.7e-59 | 91.41 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEETK+RADRKPPGVG GRGRGREDGPG KGM
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRGFDDGAKTTSGGRGKGGPGGKPVANR
GRGFDDGAK SGGRGKGGPGGKP ANR
Subjt: GRGFDDGAKTTSGGRGKGGPGGKPVANR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 1.5e-44 | 80 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRG
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEE K+R DRKPPGVG GRGRG +DG G +G GRG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRG
Query: FDDGAKTTSGGRGKG
G + G G+G
Subjt: FDDGAKTTSGGRGKG
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| Q3ZBK6 U6 snRNA-associated Sm-like protein LSm4 | 3.8e-32 | 60.8 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRG------REDGPGL
MLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYI G+ IKYLR+PDE+ID V+EE V GRGRG ++ G G+
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRG------REDGPGL
Query: KGMGRGFDDGAKTTSGGRGKGG-PG
G GRG GGRG+GG PG
Subjt: KGMGRGFDDGAKTTSGGRGKGG-PG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 5.4e-47 | 78.23 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGRED----GPGLKG
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+ GN IKYLRVPDEVIDKVQEE KSR DRKPPGVG R RG D G KG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGRED----GPGLKG
Query: MGRGFDDGAKTTSGGRGKGGPGGK
+GRG DDG + GRGKGGP K
Subjt: MGRGFDDGAKTTSGGRGKGGPGGK
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 9.8e-49 | 81.15 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEET-KSRADRKPPGVGHGRGRGR-EDGPGLKGMG
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYI GN IKYLRVPDEVIDKVQEET KSR+DR+PPGVG GRGRG PG +G+G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEET-KSRADRKPPGVGHGRGRGR-EDGPGLKGMG
Query: RGFDDGAKTTSGGRGKGGPGGK
RG DDG GGRG+GG GGK
Subjt: RGFDDGAKTTSGGRGKGGPGGK
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.7e-45 | 77.42 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
MLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYI GN IKYLRVPDEVIDKVQEETKSRADRKPPGVG GRGRGRE+G G ++G
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPG---LKGM
Query: GRG-FDDGAKTTSGGRGKGGPGGK
GR AK RG+G GK
Subjt: GRG-FDDGAKTTSGGRGKGGPGGK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 1.5e-07 | 32.76 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVID-KVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRGF
VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +I G+K++++ +PD + + + +R K +G GRGRG G G GRG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVID-KVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRGF
Query: DDGAKTTSGGRGKGGP
+GGRG P
Subjt: DDGAKTTSGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 2.1e-06 | 33.04 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRGFD
VE+K+GE Y G ++ C+ N L + T+KDG + ++ +I G+ +++L +PD ++ R K +G GRGRG KG GRG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRGFD
Query: DGAKTTSGGRGKGGP
T GGRG P
Subjt: DGAKTTSGGRGKGGP
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 1.0e-45 | 80 | Show/hide |
Query: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRG
MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI GN IKYLRVPDEVIDKVQEE K+R DRKPPGVG GRGRG +DG G +G GRG
Subjt: MLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIHGNKIKYLRVPDEVIDKVQEETKSRADRKPPGVGHGRGRGREDGPGLKGMGRG
Query: FDDGAKTTSGGRGKG
G + G G+G
Subjt: FDDGAKTTSGGRGKG
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