| GenBank top hits | e value | %identity | Alignment |
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| KAA0046492.1 putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa] | 8.2e-75 | 94.16 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEGDLTEMGNR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR E D ++GNR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEGDLTEMGNR
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 1.7e-72 | 98.59 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_011653886.2 probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis sativus] | 2.9e-72 | 97.89 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDGAKA++GGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_022926288.1 sm-like protein LSM4 isoform X1 [Cucurbita moschata] | 2.7e-73 | 98.59 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 5.9e-73 | 98.59 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDD AKA SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 8.3e-73 | 98.59 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A5D3BGF1 U6 snRNA-associated Sm-like protein LSm4 | 4.0e-75 | 94.16 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP GVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEGDLTEMGNR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR E D ++GNR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEGDLTEMGNR
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 1.9e-72 | 97.18 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKP G+GRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDG+KA+SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A6J1EHL8 U6 snRNA-associated Sm-like protein LSm4 | 1.3e-73 | 98.59 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| A0A6J1J2N4 U6 snRNA-associated Sm-like protein LSm4 | 1.3e-73 | 98.59 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETK+RADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
GREDGPGGRPAKGMGRGFDDGAKA SGGRGKGGPGGKPGANR
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 8.3e-54 | 82.58 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKG
G +DG A+G GRG G + G G+G
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKG
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.9e-58 | 80.27 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY+RGNTIKYLRVPDEVIDKVQEE KSR DRKPPGVGR R R
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: -GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEG
GR+D GR KG+GRG DDG + GRGKGGP K G G
Subjt: -GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 9.5e-58 | 81.08 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECYIRGNTIKYLRVPDEVIDKVQEET KSR+DR+PPGVGRGRG
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEET-KSRADRKPPGVGRGRG
Query: RGR-EDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEG
RG PGGR G+GRG DDG GGRG+GG GGK G G
Subjt: RGR-EDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANREAEG
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| Q9QXA5 U6 snRNA-associated Sm-like protein LSm4 | 6.2e-41 | 64.79 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPECYIRG+TIKYLR+PDE+ID V+EE +GRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
G GP + K GRG + GGRG+ GG PGA R
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGPGGKPGANR
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.8e-57 | 82.86 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+CYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRG-FDDGAKATSGGRGKGGPGGKPG
GRE+G G R +G GR AKA RG+G GK G
Subjt: GREDGPGGRPAKGMGRG-FDDGAKATSGGRGKGGPGGKPG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 2.4e-11 | 34.06 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD + ++ K ++ GVGR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD-----EVIDKVQEETKSRADRKPPGVGR
Query: GRGRGREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGP
GRG R G+PA G GRG +GGRG P
Subjt: GRGRGREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 8.9e-11 | 32.84 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD + + + ++ + + GVGRGRG
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVID-KVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGP
AKG GRG T GGRG P
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKGGP
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 7.1e-08 | 39.6 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGPGG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGRGRGR G GG
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGRGRGREDGPGG
Query: R
R
Subjt: R
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| AT4G02840.2 Small nuclear ribonucleoprotein family protein | 1.5e-05 | 36.04 | Show/hide |
Query: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
+ELKNG +G + + D MN HL+ V T K G + +RGN I+Y +PD + + E+T K A + P G GRGR
Subjt: VELKNGETYNGHLVN----------CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--EVIDKVQEET------KSRADRKPPGVGRGR
Query: GRGREDGPGGR
GRGR G GGR
Subjt: GRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 5.9e-55 | 82.58 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE K+R DRKPPGVGRGRGR
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRKPPGVGRGRGR
Query: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKG
G +DG A+G GRG G + G G+G
Subjt: GREDGPGGRPAKGMGRGFDDGAKATSGGRGKG
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