; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038250 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038250
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate-gated kainate-type ion channel receptor subunit GluR5
Genome locationchr2:14322545..14323040
RNA-Seq ExpressionLag0038250
SyntenyLag0038250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646070.1 hypothetical protein Csa_015561 [Cucumis sativus]1.0e-2076Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDG
        ML+SF  RFIL LT+VLAL S+S++AAR+P  YWEQMLPKKLP+PSSAPSKGTN+VAPSSSK +KV+GNLP KDG
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDG

KAF4387201.1 hypothetical protein F8388_008835 [Cannabis sativa]1.3e-1260.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK
        ML S+R ++ L   +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK

KAF4402307.1 hypothetical protein G4B88_003228 [Cannabis sativa]4.5e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK
        ML S+R ++ L+  +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK

KAG6607702.1 hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2076.25Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLP--TKDGKFQ
        M +SFR RFI +L +VLALAS+SSEAAR+P +YWEQMLPKKLPTPSSAPSKGTNSVA SS K VKVDGNLP   KDG F+
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLP--TKDGKFQ

TYK23265.1 glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]1.3e-2074.67Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDG
        ML++F  RFIL LT++LAL S+SS+AAR+P  YWEQMLPKKLP+PSSAPSKGTN+VAPSSSK +KV+GNLP KDG
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDG

TrEMBL top hitse value%identityAlignment
A0A2P5W5E0 Uncharacterized protein1.8e-1261.84Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK
        MLVS R + +L+L ++  +  + SEA+R P+ YWEQMLPKKLPTPSS+PSKGTNSV  S+SKAVK D +LP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK

A0A5D3DI56 Glutamate-gated kainate-type ion channel receptor subunit GluR56.3e-2174.67Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDG
        ML++F  RFIL LT++LAL S+SS+AAR+P  YWEQMLPKKLP+PSSAPSKGTN+VAPSSSK +KV+GNLP KDG
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDG

A0A7J6GWN4 Uncharacterized protein6.3e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK
        ML S+R ++ L   +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK

A0A7J6I408 Uncharacterized protein2.2e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK
        ML S+R ++ L+  +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK

A0A803PR73 Uncharacterized protein6.3e-1360.53Show/hide
Query:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK
        ML S+R ++ L   +++A   + SEA+RLP+EY++QM+PKKLP+PSS+PSKGTNSV  SSSKAVK D NLP+ DGK
Subjt:  MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTTCTTTCAGGGTTAGATTCATTTTGGTCTTAACCGTCGTGCTCGCTCTCGCCTCCGTGTCGTCGGAGGCGGCGAGGTTGCCGAGGGAGTATTGGGAG
CAGATGTTGCCGAAGAAGCTACCGACGCCGTCCTCGGCACCGTCGAAAGGGACGAATTCCGTGGCTCCTTCGTCTTCTAAAGCTGTGAAAGTTGATGGGAACCTG
CCTACGAAGGACGGGAAGTTTCAGAAGGTATATATACATTATTCCAACCTCTCAAATAATTTCTCGTCGGTGAGAGCTGCAAATCGGGGATTCCAAGGAGGAGGA
GGCGGCGGCAACGCGGTGGCTGGTGGTGGAGCTCCTGGTTCAGTGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTTTCTTTCAGGGTTAGATTCATTTTGGTCTTAACCGTCGTGCTCGCTCTCGCCTCCGTGTCGTCGGAGGCGGCGAGGTTGCCGAGGGAGTATTGGGAG
CAGATGTTGCCGAAGAAGCTACCGACGCCGTCCTCGGCACCGTCGAAAGGGACGAATTCCGTGGCTCCTTCGTCTTCTAAAGCTGTGAAAGTTGATGGGAACCTG
CCTACGAAGGACGGGAAGTTTCAGAAGGTATATATACATTATTCCAACCTCTCAAATAATTTCTCGTCGGTGAGAGCTGCAAATCGGGGATTCCAAGGAGGAGGA
GGCGGCGGCAACGCGGTGGCTGGTGGTGGAGCTCCTGGTTCAGTGGCTTGA
Protein sequenceShow/hide protein sequence
MLVSFRVRFILVLTVVLALASVSSEAARLPREYWEQMLPKKLPTPSSAPSKGTNSVAPSSSKAVKVDGNLPTKDGKFQKVYIHYSNLSNNFSSVRAANRGFQGGG
GGGNAVAGGGAPGSVA