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Lag0038257 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038257
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr2:14425244..14426445
RNA-Seq ExpressionLag0038257
SyntenyLag0038257
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7150218.1 hypothetical protein RHSIM_Rhsim02G0197700 [Rhododendron simsii]5.2e-0734.74Show/hide
Query:  FTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE
        FTI  H+  +   RP + Y G  V   +   P  ++++ +  +   LG      + YV+ GK ++ G KM+LTD +I++M+E LP  R+V MYVE
Subjt:  FTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE

KAG5536644.1 hypothetical protein RHGRI_024163 [Rhododendron griersonianum]4.9e-0531.58Show/hide
Query:  FTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE
        FTI  H+  +   RP + Y G  V   +   P  ++++ +  +   LG      + YV+ GK +  G +M+LTD +I+ M++ LP  R V MY+E
Subjt:  FTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE

KAG5544429.1 hypothetical protein RHGRI_017001 [Rhododendron griersonianum]7.5e-0634.15Show/hide
Query:  RPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE
        RP + Y G  V+ V +  P  ++++ +  +   LG      + YV+ GK ++ G +M+LTD +++ M+E LP  R+V MYVE
Subjt:  RPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE

KAG5551827.1 hypothetical protein RHGRI_010056 [Rhododendron griersonianum]2.8e-0531.58Show/hide
Query:  FTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE
        FTI  H+  +   RP + Y G  V   +   P  ++++ +  +   LG      + YV+ GK +  G +M+LTD +I+ M++ LP  R V MY+E
Subjt:  FTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVE

XP_034229423.1 uncharacterized protein LOC117638399 [Prunus dulcis]1.7e-0533.03Show/hide
Query:  TITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVEHNPN-R
        TI F Y     + PR  Y    V+   +V    L+ LE+  +   LGV N+ +F Y +PG   + G   +  D++IL  V  +P +R + +YVEH+ +  
Subjt:  TITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVEHNPN-R

Query:  EII-DYTMP
        E+I D T P
Subjt:  EII-DYTMP

TrEMBL top hitse value%identityAlignment
A0A2N9EX01 DBD_Tnp_Mut domain-containing protein8.9e-0534.21Show/hide
Query:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N
        FT+  HYN  ++ +  R +Y G  V V  ++     ++ E+  +   LGVYN   F YV+PG  LS G + + TD +I+ M + L P +  V +YVEH  
Subjt:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N

Query:  PNREIIDYTMPITE
        PN   +D  + I +
Subjt:  PNREIIDYTMPITE

A0A2N9FZE3 SWIM-type domain-containing protein8.9e-0534.21Show/hide
Query:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N
        FT+  HYN  ++ +  R +Y G  V V  ++     ++ E+  +   LGVYN   F YV+PG  LS G + + TD +I+ M + L P +  V +YVEH  
Subjt:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N

Query:  PNREIIDYTMPITE
        PN   +D  + I +
Subjt:  PNREIIDYTMPITE

A0A2N9HT52 SWIM-type domain-containing protein8.9e-0534.21Show/hide
Query:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N
        FT+  HYN  ++ +  R +Y G  V V  ++     ++ E+  +   LGVYN   F YV+PG  LS G + + TD +I+ M + L P +  V +YVEH  
Subjt:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N

Query:  PNREIIDYTMPITE
        PN   +D  + I +
Subjt:  PNREIIDYTMPITE

A0A2N9I0N2 SWIM-type domain-containing protein8.9e-0534.21Show/hide
Query:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N
        FT+  HYN  ++ +  R +Y G  V V  ++     ++ E+  +   LGVYN   F YV+PG  LS G + + TD +I+ M + L P +  V +YVEH  
Subjt:  FTITFHYNWRIE-YRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEML-PEDRMVHMYVEH-N

Query:  PNREIIDYTMPITE
        PN   +D  + I +
Subjt:  PNREIIDYTMPITE

A0A6J5XD22 Uncharacterized protein8.9e-0532.11Show/hide
Query:  TITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVEHNPN-R
        TI F Y     + PR  Y    V+   +V    L+ LE+  +   LGV N+ +F Y +PG   + G   +  D++IL  V  +P +R + + VEH+ +  
Subjt:  TITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTAWFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVEHNPN-R

Query:  EII-DYTMP
        E+I D T P
Subjt:  EII-DYTMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAGAGAGACGAACGAGGCGAAGACGAAGACGAACACTGCTTGCTTCCGAAGTCTTTTCCTTGTGTCGAAGGTTAGTAAAAGCTCAACACTCGTTCGTTCTTGTTT
GCTTGGCGTTCGATTTCAACAGGAAGACACGATGTTTTTGAAATTTAGGTCTTCTAGGCGTTTCACCATCACATTTCACTACAATTGGAGAATAGAATATAGACCTAGGG
TTGAGTATTTTGGGGAAAAAGTTTCTGTTGTGAAAGACGTAGGACCTAGTGGCCTAACGATCCTAGAATTATCCGTCCTCACAACATATCTAGGTGTATATAATACAGCT
TGGTTTGGTTACGTTGTGCCGGGGAAAACATTAAGTACTGGATATAAGATGATTCTAACGGATGACAATATTTTGAATATGGTTGAAATGCTCCCAGAGGATAGGATGGT
GCATATGTATGTTGAGCACAACCCGAATAGAGAAATTATAGATTATACTATGCCTATCACTGAGGTTAAGCCAATGTATTTGGAGTGGTACCCTAAGGAAGTGAGTGAAG
AGTCTCTTGATAAGAAAGGAAGTGACAAGGTAGATATAGAGTCGATGGTTGAGAGGGAAAAGGAAAAAGTTGTGGAAGACACTGACCAAAACCATCCGGAAGTTGTAGTG
GAAGATCTATTCGAGTATTGTGATGAAGAATGGACTGGAGATGAGTCAGAAGATGAAACGGATGATGGTCACGATGATGAGTATGAAGAAGGAGAAGATTGTAGCGATGA
GGGTTCTGTTAAGGCAAATGAACCTTTCGAGGCACACATATCTATCGATGCAGATGTGGGATTGTTGATAGGCGATTACCGCAAGTGCACGGGTCGTCACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATAGAGAGACGAACGAGGCGAAGACGAAGACGAACACTGCTTGCTTCCGAAGTCTTTTCCTTGTGTCGAAGGTTAGTAAAAGCTCAACACTCGTTCGTTCTTGTTT
GCTTGGCGTTCGATTTCAACAGGAAGACACGATGTTTTTGAAATTTAGGTCTTCTAGGCGTTTCACCATCACATTTCACTACAATTGGAGAATAGAATATAGACCTAGGG
TTGAGTATTTTGGGGAAAAAGTTTCTGTTGTGAAAGACGTAGGACCTAGTGGCCTAACGATCCTAGAATTATCCGTCCTCACAACATATCTAGGTGTATATAATACAGCT
TGGTTTGGTTACGTTGTGCCGGGGAAAACATTAAGTACTGGATATAAGATGATTCTAACGGATGACAATATTTTGAATATGGTTGAAATGCTCCCAGAGGATAGGATGGT
GCATATGTATGTTGAGCACAACCCGAATAGAGAAATTATAGATTATACTATGCCTATCACTGAGGTTAAGCCAATGTATTTGGAGTGGTACCCTAAGGAAGTGAGTGAAG
AGTCTCTTGATAAGAAAGGAAGTGACAAGGTAGATATAGAGTCGATGGTTGAGAGGGAAAAGGAAAAAGTTGTGGAAGACACTGACCAAAACCATCCGGAAGTTGTAGTG
GAAGATCTATTCGAGTATTGTGATGAAGAATGGACTGGAGATGAGTCAGAAGATGAAACGGATGATGGTCACGATGATGAGTATGAAGAAGGAGAAGATTGTAGCGATGA
GGGTTCTGTTAAGGCAAATGAACCTTTCGAGGCACACATATCTATCGATGCAGATGTGGGATTGTTGATAGGCGATTACCGCAAGTGCACGGGTCGTCACAAGTAA
Protein sequenceShow/hide protein sequence
MNRETNEAKTKTNTACFRSLFLVSKVSKSSTLVRSCLLGVRFQQEDTMFLKFRSSRRFTITFHYNWRIEYRPRVEYFGEKVSVVKDVGPSGLTILELSVLTTYLGVYNTA
WFGYVVPGKTLSTGYKMILTDDNILNMVEMLPEDRMVHMYVEHNPNREIIDYTMPITEVKPMYLEWYPKEVSEESLDKKGSDKVDIESMVEREKEKVVEDTDQNHPEVVV
EDLFEYCDEEWTGDESEDETDDGHDDEYEEGEDCSDEGSVKANEPFEAHISIDADVGLLIGDYRKCTGRHK