| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7597660.1 Reverse transcriptase domain [Arabidopsis suecica] | 3.3e-39 | 38.55 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKK---NGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
IIS +Q+AFVPGR I DN++V HE LH+LKSK+ +G +K D+SKAYDRVEW FLE+++ +GF +WV+ IM+CV+T + IL+NG P G + P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKK---NGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKK--PVLVDILAIPVVTDLGKYLDIPSSFTRRRGEDFQSIKQR------------VYGKILVGNH
GI QGDPLSPYLFL C E LS ++ A+ + HI G K I + D + SS ++ FQ ++ ++G +
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKK--PVLVDILAIPVVTDLGKYLDIPSSFTRRRGEDFQSIKQR------------VYGKILVGNH
Query: RDKMENPL--EKMGGFMPSKGFGWLKLHRLRVLIKHYLLNRIEEKRWKW
R +++ L EK+GG G + R +V + Y++ R++E+ W
Subjt: RDKMENPL--EKMGGFMPSKGFGWLKLHRLRVLIKHYLLNRIEEKRWKW
|
|
| XP_013654532.1 uncharacterized protein LOC106359365 [Brassica napus] | 1.3e-38 | 44.56 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLK---SKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
I+S+NQSAFVPGR I DN+++ HE LH LK ++K +K DMSKAYDR+EW F+ +L +GFH KW+ IM+CV T +S L+NG+P G + P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLK---SKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKK-----PVLVDILAIPVV--------TDLGKYLDIPSSFTRRRGEDFQSIKQRVYGK
GI QGDPLSPY+F+LC E LS + AQ + G + P + I + +GKYL +P F R +G F SI R+ K
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKK-----PVLVDILAIPVV--------TDLGKYLDIPSSFTRRRGEDFQSIKQRVYGK
|
|
| XP_030483480.1 uncharacterized protein LOC115700064 [Cannabis sativa] | 8.7e-40 | 49.17 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
+IS QSAFVPGR I DN++VG E LH+L K NG +G L++DMSKAYDRVEW FL ++ GF +WV L++DCV T ++ L+NG P GC+VP R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGEDFQSIKQRVYGKI
G+ QG PL PYLFL C EALSSMI A+ +S + VL D+L + V KYL +P+ R + F SI +V ++
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGEDFQSIKQRVYGKI
|
|
| XP_035551721.1 uncharacterized protein LOC118349890 [Juglans regia] | 7.4e-39 | 56.3 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
IIS QS+F+PGR I DN++V +E LH LK KK G++G +K+DMSKAYDRVEW F+E +++ +GFH+K ++L+M CV+T FSIL+NG+PTG IVP R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG
G+ QGDP+SPYLFLLC E L S++ A+ ++G
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG
|
|
| XP_042958109.1 uncharacterized protein LOC122293655 [Carya illinoinensis] | 7.4e-39 | 40.65 | Show/hide |
Query: DIISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQ
DIIS NQSAF+PGR I DNI+V +E LHT+++++ G++G +K+DMSKAYDRVEW FL+ +L+ +GF DKW +LIM CV+T +S+++NGTP P
Subjt: DIISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQ
Query: RGICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG--------------------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRG
RG+ QGDPLSPYLFLLC E LSS++ NA+ I G + ++ V + KYL +P++ R +
Subjt: RGICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG--------------------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRG
Query: EDFQSIKQRVYGKI
F+ +K++++ +I
Subjt: EDFQSIKQRVYGKI
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9H1U1 Reverse transcriptase domain-containing protein | 2.9e-41 | 42.72 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
IIS+ QSAFVPGR I DNI+V E LH +K++ G+ G LK+DMSKAYDRVEWVFL+ ++ +GF+ KWV L+M+C+ + +SIL+NG+P G + P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKH-------------ISG-------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGE
G+ QGDPLSPYLFLLC E L + Q K+ +SG K+ ++ +L +PVV + KYL +PS R R E
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKH-------------ISG-------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGE
Query: DFQSIKQRVYGKI
F IK++++ ++
Subjt: DFQSIKQRVYGKI
|
|
| A0A2N9HRK6 Uncharacterized protein | 2.9e-41 | 48.63 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
I+S +QSAFVPGR I DN+++ E LH + K GR+G LK+DMSKAYDRVEW +LE+++ +GFH KW+ L++ C+ + +S+L+NG P G I P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKKPVLVDILAIPVVTDL--GKYLDIPSSFTRRRGEDFQSIKQRVYGKI
G+ QGDPLSPYLFLLC E L S+I A+ SG + P +T L KYL +PS R R E F IK+RV+ K+
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISGKKPVLVDILAIPVVTDL--GKYLDIPSSFTRRRGEDFQSIKQRVYGKI
|
|
| A0A2N9HW04 Reverse transcriptase domain-containing protein | 1.7e-41 | 43.19 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
IIS+ QSAFVPGR I DNI+V E LH +K++ G+ G LK+DMSKAYDRVEWVFL+ ++ +GF+ KWV L+M+C+ + +SIL+NG+P G + P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKH-------------ISG-------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGE
G+ QGDPLSPYLFLLC E L + Q K+ +SG K+ ++ IL +PVV + KYL +PS R R E
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKH-------------ISG-------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGE
Query: DFQSIKQRVYGKI
F IK++++ ++
Subjt: DFQSIKQRVYGKI
|
|
| A0A2N9HYS7 Uncharacterized protein | 1.1e-40 | 41.47 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
+IS++QSAFVPGR I DNI++ E LH + +++ G+ G LK+DMSKAYDRVEW FL++++ +GFHD+W+ LIM+C+ T +SIL+NG PTG I P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNA-----------------QHHKHISG-------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTR
G+ QGDP+SPYLFLLC E L+ +I A Q ++ SG K+ + +IL +P + KYL +PS +
Subjt: GICQGDPLSPYLFLLCVEALSSMITNA-----------------QHHKHISG-------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTR
Query: RRGEDFQSIKQRVYGKI
+ F IK+RV+ K+
Subjt: RRGEDFQSIKQRVYGKI
|
|
| A0A2N9J7E4 Uncharacterized protein | 1.7e-41 | 42.18 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
+IS++QSAFVPGR I DNI++ E LH + +++ G+ G LK+DMSKAYDRVEW FL++++ +GFHD+W+ LIM+C+ T +SIL+NG PTG I P R
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQG---LKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQR
Query: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG------------------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGEDF
G+ QGDP+SPYLFLLC E L+ +I A I G K + +IL +P + KYL +PS + + F
Subjt: GICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG------------------------------KKPVLVDILAIPVVTDLGKYLDIPSSFTRRRGEDF
Query: QSIKQRVYGKI
IK+RV+ K+
Subjt: QSIKQRVYGKI
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 1.0e-11 | 24.9 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECL-HTLKSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
+I +Q F+PG NI + H ++K + +D KA+D+++ F+ K LN +G ++++I +I+LNG + G
Subjt: IISKNQSAFVPGRFIQDNIIVGHECL-HTLKSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
Query: CQGDPLSPYLFLLCVEALSSMITNAQHHKHIS-GKKPVLVDILAIPVVTDL-------GKYLDIPSSFTRRRGEDFQSIKQRVYGKILVGNHRDKMENPL
QG PLSP LF + +E L+ I + K I GK+ V + + A ++ L L + S+F++ G K + + L N+R +
Subjt: CQGDPLSPYLFLLCVEALSSMITNAQHHKHIS-GKKPVLVDILAIPVVTDL-------GKYLDIPSSFTRRRGEDFQSIKQRVYGKILVGNHRDKMENPL
Query: EKMGGFMPSKGFGWLKLHRLR----VLIKHY--LLNRIEEKRWKWL-IDCVFQGSMD
++ + SK +L + R + ++Y LL I+E KW I C + G ++
Subjt: EKMGGFMPSKGFGWLKLHRLR----VLIKHY--LLNRIEEKRWKWL-IDCVFQGSMD
|
|
| P08548 LINE-1 reverse transcriptase homolog | 1.8e-08 | 28.48 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECL-HTLKSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
II +Q F+PG NI + H K K L +D KA+D ++ F+ + L IG +++LI +I+LNG + G
Subjt: IISKNQSAFVPGRFIQDNIIVGHECL-HTLKSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
Query: CQGDPLSPYLFLLCVEALSSMITNAQHHKHIS-GKKPVLVDILAIPVVTDL
QG PLSP LF + +E L+ I + K I G + + + + A ++ L
Subjt: CQGDPLSPYLFLLCVEALSSMITNAQHHKHIS-GKKPVLVDILAIPVVTDL
|
|
| P11369 LINE-1 retrotransposable element ORF2 protein | 1.0e-11 | 30.06 | Show/hide |
Query: IISKNQSAFVPGRFIQDNIIVGHECLHTL-KSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
II +Q F+PG NI +H + K K + +D KA+D+++ F+ K+L G ++ +I +I +NG I + G
Subjt: IISKNQSAFVPGRFIQDNIIVGHECLHTL-KSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
Query: CQGDPLSPYLFLLCVEALSSMITNAQHHKHIS-GKKPVLVDILAIPVVTDLGKYLDIPSSFTR
QG PLSPYLF + +E L+ I + K I GK+ V + +LA D+ Y+ P + TR
Subjt: CQGDPLSPYLFLLCVEALSSMITNAQHHKHIS-GKKPVLVDILAIPVVTDLGKYLDIPSSFTR
|
|
| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.8e-08 | 30.17 | Show/hide |
Query: DIISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
++I +QS VPGR I DN+ + + LH + L +D KA+DRV+ +L L F ++V + + + + +N + T + RG+
Subjt: DIISKNQSAFVPGRFIQDNIIVGHECLHTLKSKKNGRQGLKVDMSKAYDRVEWVFLEKLLNMIGFHDKWVRLIMDCVKTTKFSILLNGTPTGCIVPQRGI
Query: CQGDPLSPYLFLLCVE
QG PLS L+ L +E
Subjt: CQGDPLSPYLFLLCVE
|
|
| P92555 Uncharacterized mitochondrial protein AtMg01250 | 6.3e-09 | 51.02 | Show/hide |
Query: LLNGTPTGCIVPQRGICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG
++NG P G + P RG+ QGDPLSPYLF+LC E LS + AQ + G
Subjt: LLNGTPTGCIVPQRGICQGDPLSPYLFLLCVEALSSMITNAQHHKHISG
|
|
