; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038277 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038277
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionmethyl-CpG-binding domain-containing protein 13 isoform X1
Genome locationchr2:14707890..14709709
RNA-Seq ExpressionLag0038277
SyntenyLag0038277
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575094.1 hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1558.59Show/hide
Query:  MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS
        MAA  NR  RG  LK PCRSDTY+S+EN Q   AS  A                     +DEP+AKRQRR+AKYKAYAVESK KASLR GIRWVKIKCS
Subjt:  MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS

KAG6593998.1 hypothetical protein SDJN03_13474, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2063.37Show/hide
Query:  AGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVK-IKCSNE
        A R    RGG LKSPCRSDTY+  ENQQ+F A+ TAA N  SHLHGGS+FS    G  DE + KRQ+RIAKYKAYAVESK KAS+R+GIR  K I+   E
Subjt:  AGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVK-IKCSNE

Query:  R
        R
Subjt:  R

KAG7026338.1 hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2467.35Show/hide
Query:  AGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSN
        A R    RGG LKSPCRSDTY+  ENQQ+F A+ TAA N  SHLHGGS+FS    G  DE + KRQ+RIAKYKAYAVESK KAS+R+GIRWVKIKC +
Subjt:  AGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSN

KGN47400.1 hypothetical protein Csa_023055 [Cucumis sativus]3.7e-2268.69Show/hide
Query:  MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS
        MAA  NRE RGG LKSPCRSDTY           +A  AWNT SHLHGGSS   S S  +DEP+ KRQRRIAKYKAYAVESKLK+SLR+GIRWVKIKC+
Subjt:  MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS

XP_022138799.1 uncharacterized protein LOC111009876 [Momordica charantia]3.2e-1862.04Show/hide
Query:  MAAGRNRERRGGALKSP--CRSDTYMSNEN-----QQRFLASATAAW-NTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIR
        MA G NRE RG   KS   C SD Y +  N      QRF     AAW NT  H+HGGSSF    SG YDEP+AKRQRRIAKYKAYAVESKLK+S R GIR
Subjt:  MAAGRNRERRGGALKSP--CRSDTYMSNEN-----QQRFLASATAAW-NTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIR

Query:  WVKIKCSN
        WVKIKC++
Subjt:  WVKIKCSN

TrEMBL top hitse value%identityAlignment
A0A0A0KCE9 Uncharacterized protein1.8e-2268.69Show/hide
Query:  MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS
        MAA  NRE RGG LKSPCRSDTY           +A  AWNT SHLHGGSS   S S  +DEP+ KRQRRIAKYKAYAVESKLK+SLR+GIRWVKIKC+
Subjt:  MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS

A0A5D3BVC0 Uncharacterized protein1.6e-1561.22Show/hide
Query:  AGRNRERRGGALKSPCRSDTY-MSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS
        AG+     GG LKS CRSD Y  S++N QRF A+ T AWNT       SS SN     +DE + KRQRRIAKYKAYAVESKLK+SLR GIRWVKIK S
Subjt:  AGRNRERRGGALKSPCRSDTY-MSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS

A0A6J1CB45 uncharacterized protein LOC1110098761.6e-1862.04Show/hide
Query:  MAAGRNRERRGGALKSP--CRSDTYMSNEN-----QQRFLASATAAW-NTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIR
        MA G NRE RG   KS   C SD Y +  N      QRF     AAW NT  H+HGGSSF    SG YDEP+AKRQRRIAKYKAYAVESKLK+S R GIR
Subjt:  MAAGRNRERRGGALKSP--CRSDTYMSNEN-----QQRFLASATAAW-NTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIR

Query:  WVKIKCSN
        WVKIKC++
Subjt:  WVKIKCSN

A0A6J1FZ39 methyl-CpG-binding domain-containing protein 13 isoform X15.2e-1449.56Show/hide
Query:  RLAYKLRKQRNNDIEFQHDDISVSVL--KRCKRLAKQGDSLYGVRGSLESSEITNDEGIFPNATSVGESMP-PVPNSDHEPKD------------PEQSD
        RLAYK R QR  ++EFQHDDIS   +  K  + + K    +      LE  EITNDE IFPNATSVGESMP   P+S H                PEQSD
Subjt:  RLAYKLRKQRNNDIEFQHDDISVSVL--KRCKRLAKQGDSLYGVRGSLESSEITNDEGIFPNATSVGESMP-PVPNSDHEPKD------------PEQSD

Query:  GKNDFSQFVVTPN
        GKNDFS+ V TP+
Subjt:  GKNDFSQFVVTPN

A0A6J1FZ67 methyl-CpG-binding domain-containing protein 13 isoform X22.3e-1451.38Show/hide
Query:  RLAYKLRKQRNNDIEFQHDDISVSVL--KRCKRLAKQGDSLYGVRGSLESSEITNDEGIFPNATSVGESMP-PVPNSDHEPKD--------PEQSDGKND
        RLAYK R QR  ++EFQHDDIS   +  K  + + K    +      LE  EITNDE IFPNATSVGESMP   P+S H            PEQSDGKND
Subjt:  RLAYKLRKQRNNDIEFQHDDISVSVL--KRCKRLAKQGDSLYGVRGSLESSEITNDEGIFPNATSVGESMP-PVPNSDHEPKD--------PEQSDGKND

Query:  FSQFVVTPN
        FS+ V TP+
Subjt:  FSQFVVTPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G19460.1 Protein of unknown function (DUF3511)9.7e-0542.55Show/hide
Query:  SNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS
        S+S S  + +P  +R++R+  Y+AY VE KLK S R   +W+K KC+
Subjt:  SNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS

AT2G47480.1 Protein of unknown function (DUF3511)8.8e-0648.08Show/hide
Query:  GGSSFSNS-KSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKC
        G S+ S+S + G   + + KR++RIA+YKAY VE K+K++L+ G RW+K KC
Subjt:  GGSSFSNS-KSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKC

AT3G05725.1 Protein of unknown function (DUF3511)1.8e-0634.94Show/hide
Query:  YMSNENQQRFLASATAAWNTQSHL------HGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS
        Y+  E+++      T  W   S+          SS S    G +++P+ KR+RR+AKYK Y+ E K+K +LR   +W+KI+CS
Subjt:  YMSNENQQRFLASATAAWNTQSHL------HGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCS

AT3G13910.1 Protein of unknown function (DUF3511)1.7e-0443.9Show/hide
Query:  SKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVK
        S+S  + +P+++R+RR+A YK Y+VE K+K S+R   +W K
Subjt:  SKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCGGAAGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAATGAGAATCAACAACGGTTTCTGGCGTCGGCGAC
GGCGGCGTGGAATACACAGAGCCATTTGCATGGTGGTTCGTCGTTTTCGAATTCCAAAAGCGGCGAGTACGATGAACCGAAGGCTAAAAGGCAACGACGGATTGCGAAGT
ACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTTCAAATGAGAGAGAAGAAAGGATGGAAAGTTTTACA
TTGATCCTGTTAATGGAAATGGTATCTAACAACTGGAAAGGTGAGCGGTTAGCATATAAATTAAGGAAGCAGAGAAACAACGATATTGAGTTTCAACATGATGACATCTC
TGTAAGTGTTCTCAAGAGATGCAAGCGATTGGCAAAGCAAGGAGACAGTTTATATGGAGTGAGAGGTTCATTGGAATCCAGTGAAATAACAAATGATGAAGGTATTTTTC
CAAATGCTACAAGTGTTGGAGAAAGCATGCCTCCCGTACCTAATTCTGATCATGAGCCCAAAGATCCAGAGCAATCAGATGGAAAGAATGATTTTTCTCAATTTGTGGTG
ACTCCCAACTTGATAGATAAATCAGTTTATGGGGAACACTCAGCTCTAAGTGTTGCAAACTTTGGCCGAATTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCGGAAGAAACAGAGAGAGGAGAGGAGGAGCGTTAAAATCACCGTGTAGGTCAGATACGTATATGAGCAATGAGAATCAACAACGGTTTCTGGCGTCGGCGAC
GGCGGCGTGGAATACACAGAGCCATTTGCATGGTGGTTCGTCGTTTTCGAATTCCAAAAGCGGCGAGTACGATGAACCGAAGGCTAAAAGGCAACGACGGATTGCGAAGT
ACAAGGCCTACGCCGTTGAAAGCAAATTGAAAGCGTCGCTTAGGACTGGGATTCGGTGGGTTAAGATCAAGTGTTCAAATGAGAGAGAAGAAAGGATGGAAAGTTTTACA
TTGATCCTGTTAATGGAAATGGTATCTAACAACTGGAAAGGTGAGCGGTTAGCATATAAATTAAGGAAGCAGAGAAACAACGATATTGAGTTTCAACATGATGACATCTC
TGTAAGTGTTCTCAAGAGATGCAAGCGATTGGCAAAGCAAGGAGACAGTTTATATGGAGTGAGAGGTTCATTGGAATCCAGTGAAATAACAAATGATGAAGGTATTTTTC
CAAATGCTACAAGTGTTGGAGAAAGCATGCCTCCCGTACCTAATTCTGATCATGAGCCCAAAGATCCAGAGCAATCAGATGGAAAGAATGATTTTTCTCAATTTGTGGTG
ACTCCCAACTTGATAGATAAATCAGTTTATGGGGAACACTCAGCTCTAAGTGTTGCAAACTTTGGCCGAATTTTCTAA
Protein sequenceShow/hide protein sequence
MAAGRNRERRGGALKSPCRSDTYMSNENQQRFLASATAAWNTQSHLHGGSSFSNSKSGEYDEPKAKRQRRIAKYKAYAVESKLKASLRTGIRWVKIKCSNEREERMESFT
LILLMEMVSNNWKGERLAYKLRKQRNNDIEFQHDDISVSVLKRCKRLAKQGDSLYGVRGSLESSEITNDEGIFPNATSVGESMPPVPNSDHEPKDPEQSDGKNDFSQFVV
TPNLIDKSVYGEHSALSVANFGRIF