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Lag0038302 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038302
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr2:14974029..14976070
RNA-Seq ExpressionLag0038302
SyntenyLag0038302
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.4e-1843.09Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  +++ GA W  S  G  + + + +TP A VW  F+++ LLPTTH  TVSK+RMLL+ S++   SI++GR+I  EI +CA +K G LFFP+LIT LC  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-1843.9Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++  GA W  S  G  + + + +TP A VW  F+++RLLPTTH  TVSK+RMLL+ S++   SI++GR+I  EI +CA +K G LFFP+LIT LC  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.0e-1842.28Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++I GA W  S  G  + L +++ P A +W  F+++RLLPTTH   VSKER+LL++S+++  SI+MGR+I +EI +CA +K+G LFFP+LI  +C  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.6e-1843.09Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++I GA W  S  G  + L +++ P A VW  F+++RLLPTTH  TVSKER+LL++S+++  SI++G+II +EI + A +K+G LFFP+LIT +C  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.9e-1743.9Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++  GA W  S  G  + + + +TP A VW  F+++RLLPTTH   VSK+RMLL+ S+++  SI++GR+I  EI +CA +K G LFFP+LIT LC  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A   + E  +   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.6e-1843.09Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  +++ GA W  S  G  + + + +TP A VW  F+++ LLPTTH  TVSK+RMLL+ S++   SI++GR+I  EI +CA +K G LFFP+LIT LC  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1843.9Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++  GA W  S  G  + + + +TP A VW  F+++RLLPTTH  TVSK+RMLL+ S++   SI++GR+I  EI +CA +K G LFFP+LIT LC  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

A0A2P5BNT0 Uncharacterized protein (Fragment)9.6e-1942.28Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++I GA W  S  G  + L +++ P A +W  F+++RLLPTTH   VSKER+LL++S+++  SI+MGR+I +EI +CA +K+G LFFP+LI  +C  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

A0A2P5CPE8 Uncharacterized protein1.3e-1843.09Show/hide
Query:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR
        L  ++I GA W  S  G  + L +++ P A VW  F+++RLLPTTH  TVSKER+LL++S+++  SI++G+II +EI + A +K+G LFFP+LIT +C  
Subjt:  LAILSIEGASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLR

Query:  AGVQLEEGDDLAIDKGIIDAAAI
        A       ++   + G IDA A+
Subjt:  AGVQLEEGDDLAIDKGIIDAAAI

A0A803NKF3 Uncharacterized protein3.7e-1827.15Show/hide
Query:  GDLKSRWSGPFTVLETFDHGTVLLKDDEDGREFKIKRAMGPRSIARKIFKPNAIDEGGSAAQNRGKQHMIEDHSVLQPIPQAPKRRQKGKERPQWRPYVK
        G LKS WSGPF V E +  G +L++D++ GREFK         +  + F              RG    +ED      I + P+   +      W  +VK
Subjt:  GDLKSRWSGPFTVLETFDHGTVLLKDDEDGREFKIKRAMGPRSIARKIFKPNAIDEGGSAAQNRGKQHMIEDHSVLQPIPQAPKRRQKGKERPQWRPYVK

Query:  NQEISYRTCWRLQLE-IRIGKTYAITRSQLSLALSRNFMQIFRITAFGNQWCEDKSWNGVRLLLINSMIYPISPLPSAMHDDSALRRAAQGDLAILSIEG
         QE       R  +E ++   T  +++   +  + R  +  F   A  N            L  + S+    + L   + D++     AQ     L+   
Subjt:  NQEISYRTCWRLQLE-IRIGKTYAITRSQLSLALSRNFMQIFRITAFGNQWCEDKSWNGVRLLLINSMIYPISPLPSAMHDDSALRRAAQGDLAILSIEG

Query:  ASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLRAGVQL--E
        + W    +GNL        P+      FV+  L PT+HD TVS++   ++  I   + +D+G ++A++I  CA +  GKLF P+ IT LC  AGV +  E
Subjt:  ASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLRAGVQL--E

Query:  EG
        EG
Subjt:  EG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGAGCATAAAGCTTTCTGGGCTATCAAGATGCTCAATTTTAATGAAGAGGCAGCTGGTGATCTTAAGTCACGGTGGTCCGGGCCATTTACTGTTTTAGAAAC
ATTTGACCACGGGACCGTGTTGCTGAAGGATGATGAAGATGGAAGAGAATTTAAGATTAAAAGAGCAATGGGTCCTCGTTCAATTGCAAGGAAGATATTCAAACCGAATG
CAATAGATGAAGGAGGCTCAGCTGCCCAAAACAGGGGCAAACAGCATATGATCGAAGACCACAGCGTTTTGCAGCCTATTCCTCAGGCGCCAAAAAGAAGACAAAAGGGA
AAGGAAAGGCCTCAATGGAGGCCATACGTGAAGAACCAAGAAATTTCTTACCGCACATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAAACTTATGCCATCACCCG
GAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATGCAAATTTTCAGGATAACGGCGTTTGGAAATCAATGGTGCGAGGACAAATCGTGGAATGGAGTCCGTCTGCTAT
TAATCAATTCTATGATATACCCGATTTCCCCTTTGCCATCTGCAATGCATGATGATAGCGCCCTCAGACGAGCAGCTCAAGGTGACCTTGCGATATTGTCTATAGAGGGC
GCGAGTTGGAAACAAAGTAAAAATGGCAACCTTTCTTTGTTGTCAGCCAATGTGACTCCCGAAGCTAATGTGTGGCTTTGGTTTGTGAGGAATCGTCTTCTACCCACTAC
GCACGACACAACGGTCTCCAAAGAGAGAATGCTCTTGGTTTTTTCTATCATGAGCCTAATCAGCATTGATATGGGAAGAATAATTGCAAAAGAAATCACCTCGTGCGCCC
GGAAGAAAGCGGGAAAGCTATTCTTCCCTAACCTCATTACGACTTTATGCTTAAGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAATCGACAAGGGAATTATA
GATGCGGCGGCTATCAACGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGGAGCATAAAGCTTTCTGGGCTATCAAGATGCTCAATTTTAATGAAGAGGCAGCTGGTGATCTTAAGTCACGGTGGTCCGGGCCATTTACTGTTTTAGAAAC
ATTTGACCACGGGACCGTGTTGCTGAAGGATGATGAAGATGGAAGAGAATTTAAGATTAAAAGAGCAATGGGTCCTCGTTCAATTGCAAGGAAGATATTCAAACCGAATG
CAATAGATGAAGGAGGCTCAGCTGCCCAAAACAGGGGCAAACAGCATATGATCGAAGACCACAGCGTTTTGCAGCCTATTCCTCAGGCGCCAAAAAGAAGACAAAAGGGA
AAGGAAAGGCCTCAATGGAGGCCATACGTGAAGAACCAAGAAATTTCTTACCGCACATGCTGGCGGTTACAATTAGAAATCAGAATTGGCAAAACTTATGCCATCACCCG
GAGCCAGCTGTCCCTAGCATTGTCAAGGAATTTTATGCAAATTTTCAGGATAACGGCGTTTGGAAATCAATGGTGCGAGGACAAATCGTGGAATGGAGTCCGTCTGCTAT
TAATCAATTCTATGATATACCCGATTTCCCCTTTGCCATCTGCAATGCATGATGATAGCGCCCTCAGACGAGCAGCTCAAGGTGACCTTGCGATATTGTCTATAGAGGGC
GCGAGTTGGAAACAAAGTAAAAATGGCAACCTTTCTTTGTTGTCAGCCAATGTGACTCCCGAAGCTAATGTGTGGCTTTGGTTTGTGAGGAATCGTCTTCTACCCACTAC
GCACGACACAACGGTCTCCAAAGAGAGAATGCTCTTGGTTTTTTCTATCATGAGCCTAATCAGCATTGATATGGGAAGAATAATTGCAAAAGAAATCACCTCGTGCGCCC
GGAAGAAAGCGGGAAAGCTATTCTTCCCTAACCTCATTACGACTTTATGCTTAAGGGCAGGGGTGCAGTTGGAAGAAGGAGATGATCTCGCAATCGACAAGGGAATTATA
GATGCGGCGGCTATCAACGATTAA
Protein sequenceShow/hide protein sequence
MELEHKAFWAIKMLNFNEEAAGDLKSRWSGPFTVLETFDHGTVLLKDDEDGREFKIKRAMGPRSIARKIFKPNAIDEGGSAAQNRGKQHMIEDHSVLQPIPQAPKRRQKG
KERPQWRPYVKNQEISYRTCWRLQLEIRIGKTYAITRSQLSLALSRNFMQIFRITAFGNQWCEDKSWNGVRLLLINSMIYPISPLPSAMHDDSALRRAAQGDLAILSIEG
ASWKQSKNGNLSLLSANVTPEANVWLWFVRNRLLPTTHDTTVSKERMLLVFSIMSLISIDMGRIIAKEITSCARKKAGKLFFPNLITTLCLRAGVQLEEGDDLAIDKGII
DAAAIND