; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038307 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038307
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:15029763..15032448
RNA-Seq ExpressionLag0038307
SyntenyLag0038307
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036786 - Ribosome maturation protein SBDS, N-terminal domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65867.1 hypothetical protein VITISV_034935 [Vitis vinifera]1.5e-4636.92Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS
        G+ KFDG +F YW+MQ++DYL  RKLH   L  KP+ M  ++W  LD +V+  IR+ LS  VA  V  E T   LM AL+                  NS
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS

Query:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAM------NKGKDKVNEDNEPSSSRKRWKNRN--EVECFYCHKKGHFKSRC---
        WE M+ AVSNST    LK++++ DL +AEEIRR+ + + S  GSAL +      N         N  +S+R R K+R+  +V+C+ C K GHFK +C   
Subjt:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAM------NKGKDKVNEDNEPSSSRKRWKNRN--EVECFYCHKKGHFKSRC---

Query:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN
        +K  ED         V DAL+         +   DW+LDS AS H    R +  ++  G  G V + +G      G+GDV +    G   +L  VR +P+
Subjt:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN

Query:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
        ++ NLIS+G+L D+G+   F     K+T G++V+A G +  TLY
Subjt:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

RVX08463.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]7.6e-4636.63Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS
        G+ KFDG +F YW+MQ++DYL  RKLH   L  KP+ M  ++W   D +V+  IR+ LS  VA  V  E T   LM AL+                  NS
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS

Query:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWKNRN--------EVECFYCHKKGHFKSRC---
        WE M+ AVSNST    LK++++ DL +AEEIRR+ + + S  GSAL +       N ++    S  R  NRN        +V+C+ C K GHFK +C   
Subjt:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWKNRN--------EVECFYCHKKGHFKSRC---

Query:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN
        +K  ED         V DAL+         +   DW+LDS AS H    R +  ++  G  G V + +G      G+GDV +    G   +L  VR +P+
Subjt:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN

Query:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
        ++ NLIS+G+L D+GY   F     K+T G++V+A G + +TLY
Subjt:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

TKS02608.1 hypothetical protein D5086_0000161380 [Populus alba]1.7e-4532.76Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------
        G+ KFDG +FGYWKMQ++DYL  +KLH   L  KP++M  ++W+ LD +V+  IR+ LS  VA  V  E +  KLM+AL+                    
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------

Query:  --------------------------------------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDK
                                                    +SWE M+TAVSNS   + LK+ ++ DL +AEE+RR+ S + S+ GSAL +N    +
Subjt:  --------------------------------------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDK

Query:  VNEDNEPSSSRKRWK------NRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANT--VYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFT
         +  +    S+ R++      +R +VEC+ C K GHF   C K K+ +     A T  V DAL+ V       +   +WILDS AS H      +  ++ 
Subjt:  VNEDNEPSSSRKRWK------NRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANT--VYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFT

Query:  GGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDV-AKRSRR
        GG HG+V + +G   K  GIGDV +KT  G    L++VR VP +K  LIS+G+L D G+   F     K++ G+ V+A G +  TL     ++   R+  
Subjt:  GGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDV-AKRSRR

Query:  QWMPVK
        +W  +K
Subjt:  QWMPVK

TKS15174.1 hypothetical protein D5086_0000036030 [Populus alba]2.4e-4735.28Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------
        G+ KFDG +FGYWKMQ++DYL  +KLH   L  KP++M  ++W+ LD +V+  I++ LS  VA  V  E +  KLM+AL+                    
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------

Query:  -----------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWK------NRNEVE
                         +SWE M+TAVSNS   + LK+ ++ DL +AEE+RR+ S + S+ GSAL +N    + +  +    S+ R++      +R +VE
Subjt:  -----------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWK------NRNEVE

Query:  CFYCHKKGHFKSRCRKHKEDQKRKHEA--NTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKT
        C+ C K GHF   C K K+ +     A  + V DA++ V       +   +WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT
Subjt:  CFYCHKKGHFKSRCRKHKEDQKRKHEA--NTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKT

Query:  ECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
          G    L++VR VP +K  LIS+G+L D G+   F     K++ G+ V+A G +  TLY
Subjt:  ECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

XP_034902342.1 LOW QUALITY PROTEIN: uncharacterized protein LOC118039689 [Populus alba]2.4e-4735.28Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------
        G+ KFDG +FGYWKMQ++DYL  +KLH   L  KP++M  ++W+ LD +V+  I++ LS  VA  V  E +  KLM+AL+                    
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------

Query:  -----------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWK------NRNEVE
                         +SWE M+TAVSNS   + LK+ ++ DL +AEE+RR+ S + S+ GSAL +N    + +  +    S+ R++      +R +VE
Subjt:  -----------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWK------NRNEVE

Query:  CFYCHKKGHFKSRCRKHKEDQKRKHEA--NTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKT
        C+ C K GHF   C K K+ +     A  + V DA++ V       +   +WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT
Subjt:  CFYCHKKGHFKSRCRKHKEDQKRKHEA--NTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKT

Query:  ECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
          G    L++VR VP +K  LIS+G+L D G+   F     K++ G+ V+A G +  TLY
Subjt:  ECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

TrEMBL top hitse value%identityAlignment
A0A2N9J4N9 CCHC-type domain-containing protein4.3e-4735.42Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------
        G+ KFDG +FGYWKMQ++DYL  +KLH   L +KP +M D +W  LD +V+  IR+ LS  VA  V  ETT V LM AL+                    
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------

Query:  -------------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-------AMNKGKDKVNEDNEPSSSRKRWKNRN
                           NSWE M+ AVSNS     LK+ ++ DL ++EE+RR+ +  ++  G A        + NK ++     N+ S SR + ++  
Subjt:  -------------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSAL-------AMNKGKDKVNEDNEPSSSRKRWKNRN

Query:  EVECFYCHKKGHFKSRC----RKHKEDQKRKHEANTVYDALVCVE-------SNTKC---SNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNG
          ECF+C KKGH +  C    ++  ED+  KH+      A+V  E          KC    N   +W++DSAA+ H+V  + LFT++  G  G V+MGN 
Subjt:  EVECFYCHKKGHFKSRC----RKHKEDQKRKHEANTVYDALVCVE-------SNTKC---SNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNG

Query:  RTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDVAKR
          SK  GIGDV +KT  G  ++L++VR VP++  NLIS   +   GY    G+ + KL  G  VVA G     LYK ++   K+
Subjt:  RTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDVAKR

A0A438JHN2 Retrovirus-related Pol polyprotein from transposon TNT 1-943.7e-4636.63Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS
        G+ KFDG +F YW+MQ++DYL  RKLH   L  KP+ M  ++W   D +V+  IR+ LS  VA  V  E T   LM AL+                  NS
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS

Query:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWKNRN--------EVECFYCHKKGHFKSRC---
        WE M+ AVSNST    LK++++ DL +AEEIRR+ + + S  GSAL +       N ++    S  R  NRN        +V+C+ C K GHFK +C   
Subjt:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWKNRN--------EVECFYCHKKGHFKSRC---

Query:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN
        +K  ED         V DAL+         +   DW+LDS AS H    R +  ++  G  G V + +G      G+GDV +    G   +L  VR +P+
Subjt:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN

Query:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
        ++ NLIS+G+L D+GY   F     K+T G++V+A G + +TLY
Subjt:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

A0A4U5PY83 CCHC-type domain-containing protein8.2e-4632.76Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------
        G+ KFDG +FGYWKMQ++DYL  +KLH   L  KP++M  ++W+ LD +V+  IR+ LS  VA  V  E +  KLM+AL+                    
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------

Query:  --------------------------------------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDK
                                                    +SWE M+TAVSNS   + LK+ ++ DL +AEE+RR+ S + S+ GSAL +N    +
Subjt:  --------------------------------------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDK

Query:  VNEDNEPSSSRKRWK------NRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANT--VYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFT
         +  +    S+ R++      +R +VEC+ C K GHF   C K K+ +     A T  V DAL+ V       +   +WILDS AS H      +  ++ 
Subjt:  VNEDNEPSSSRKRWK------NRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANT--VYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFT

Query:  GGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDV-AKRSRR
        GG HG+V + +G   K  GIGDV +KT  G    L++VR VP +K  LIS+G+L D G+   F     K++ G+ V+A G +  TL     ++   R+  
Subjt:  GGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDV-AKRSRR

Query:  QWMPVK
        +W  +K
Subjt:  QWMPVK

A0A4U5QVL9 CCHC-type domain-containing protein1.1e-4735.28Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------
        G+ KFDG +FGYWKMQ++DYL  +KLH   L  KP++M  ++W+ LD +V+  I++ LS  VA  V  E +  KLM+AL+                    
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT--------------------

Query:  -----------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWK------NRNEVE
                         +SWE M+TAVSNS   + LK+ ++ DL +AEE+RR+ S + S+ GSAL +N    + +  +    S+ R++      +R +VE
Subjt:  -----------------NSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNEDNEPSSSRKRWK------NRNEVE

Query:  CFYCHKKGHFKSRCRKHKEDQKRKHEA--NTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKT
        C+ C K GHF   C K K+ +     A  + V DA++ V       +   +WILDS AS H      +  ++ GG HG+V + +G      GIGDV +KT
Subjt:  CFYCHKKGHFKSRCRKHKEDQKRKHEA--NTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKT

Query:  ECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
          G    L++VR VP +K  LIS+G+L D G+   F     K++ G+ V+A G +  TLY
Subjt:  ECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

A5BPB3 Uncharacterized protein7.4e-4736.92Show/hide
Query:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS
        G+ KFDG +F YW+MQ++DYL  RKLH   L  KP+ M  ++W  LD +V+  IR+ LS  VA  V  E T   LM AL+                  NS
Subjt:  GVTKFDGKNFGYWKMQVKDYLTCRKLH-KALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALT------------------NS

Query:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAM------NKGKDKVNEDNEPSSSRKRWKNRN--EVECFYCHKKGHFKSRC---
        WE M+ AVSNST    LK++++ DL +AEEIRR+ + + S  GSAL +      N         N  +S+R R K+R+  +V+C+ C K GHFK +C   
Subjt:  WETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAM------NKGKDKVNEDNEPSSSRKRWKNRN--EVECFYCHKKGHFKSRC---

Query:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN
        +K  ED         V DAL+         +   DW+LDS AS H    R +  ++  G  G V + +G      G+GDV +    G   +L  VR +P+
Subjt:  RKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPN

Query:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
        ++ NLIS+G+L D+G+   F     K+T G++V+A G +  TLY
Subjt:  IKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-947.2e-3125.73Show/hide
Query:  VTKFDGKN-FGYWKMQVKDYLTCRKLHKAL---KEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETT---------------------------
        V KF+G N F  W+ +++D L  + LHK L    +KP  M  +DW  LDE   S+IR+ LS DV + +  E T                           
Subjt:  VTKFDGKN-FGYWKMQVKDYLTCRKLHKAL---KEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETT---------------------------

Query:  -------------------------------------MVKLMDALTNSWETMKTAVSNSTANNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSALAMNKG
                                              + L+++L +S++ + T + +     T++  +V   L + E++R++  N+   +   +   +G
Subjt:  -------------------------------------MVKLMDALTNSWETMKTAVSNSTANNTLKFSEVCD-LAIAEEIRRQGSNKESTVGSALAMNKG

Query:  KDKVNEDNEPSSSRKRWKNRNEVE-----CFYCHKKGHFKSRC---RKHK-EDQKRKHEANTVY------DALVCVESNTKC---SNHSSDWILDSAASV
        +      N    S  R K++N  +     C+ C++ GHFK  C   RK K E   +K++ NT        + ++ +    +C   S   S+W++D+AAS 
Subjt:  KDKVNEDNEPSSSRKRWKNRNEVE-----CFYCHKKGHFKSRC---RKHK-EDQKRKHEANTVY------DALVCVESNTKC---SNHSSDWILDSAASV

Query:  HIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY
        H    R LF  +  G  G V+MGN   SK +GIGD+ +KT  G  LVL+DVR VP+++MNLIS   L  DGY   F +++ +LT GS V+A G  + TLY
Subjt:  HIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLY

Query:  KCKLDVAKRSRRQWMPVKAADDPAAKIANFDQSDHDPSIQKQLGSPRDGYRESPIVRCSNELKKSLRRVEASKWK--------AKAVGQVSSLATGLNRG
        +   ++ +          + D    ++ +  +       +K L S   G    P   C    +  +    +S+ K        +   G +   + G N+ 
Subjt:  KCKLDVAKRSRRQWMPVKAADDPAAKIANFDQSDHDPSIQKQLGSPRDGYRESPIVRCSNELKKSLRRVEASKWK--------AKAVGQVSSLATGLNRG

Query:  FKPFFFENSRSIW
        F  F  + SR +W
Subjt:  FKPFFFENSRSIW

P25601 Putative transposon Ty5-1 protein YCL075W6.1e-0635.23Show/hide
Query:  VCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISI
        +C+ S+T  +  SS+WI D+  + H+  DRS+F+SFT         G G +    G G V++ T     + L DV +VP++ +NLIS+
Subjt:  VCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIGDVSLKTECGDKLVLRDVRFVPNIKMNLISI

Q23202 Ribosome maturation protein SBDS6.1e-0667.57Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK
        MS+++  P  QK LTNVAVVR+K+ G RFEIACYKNK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK

Q3SWZ6 Ribosome maturation protein SBDS1.4e-0573.53Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNK
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK

Q9Y3A5 Ribosome maturation protein SBDS1.4e-0573.53Show/hide
Query:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK
        S+  P  Q RLTNVAVVR+KR G RFEIACYKNK
Subjt:  SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK

Arabidopsis top hitse value%identityAlignment
AT1G43860.1 sequence-specific DNA binding transcription factors3.8e-1183.78Show/hide
Query:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK
        MS++LVQP+GQKRLTNVAVVRLK+ G RFEIACYKNK
Subjt:  MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNK

AT3G21000.1 Gag-Pol-related retrotransposon family protein1.8e-0826.9Show/hide
Query:  RWKNRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSD-WILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSG
        R K+++E  C  C+K  H +  C+      K + E   V D  +    N     +  D WI+   A +++      FT+        V   +G      G
Subjt:  RWKNRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSD-WILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSG

Query:  IGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFG
         GDV ++ + G K  +R+V FVP +  N++S GK+V   Y    G
Subjt:  IGDVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFG

AT3G29785.1 unknown protein1.5e-0734.52Show/hide
Query:  KFDGKNFGYWKMQVKDYLTCRKLHKALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALTNSWETMKT
        K DG ++ + +M+++DYL  +KLH+ L +K + M+ DDW  L  +V+  IR+ +S ++A  VA E +   LM  L++ ++   T
Subjt:  KFDGKNFGYWKMQVKDYLTCRKLHKALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALTNSWETMKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCGATCACTGGTGCAGCCGATCGGGCAGAAGAGGCTGACGAACGTGGCGGTGGTTCGTTTGAAGAGACACGGTCTCCGCTTCGAGATTGCCTGTTACAAGAACAA
GGACGGTTGTTTGGTTGATGAGTTAAAATTCTGCCTGCTTTATGCGGGTGCCACCTTTACAAGAGATGATCCTTACTGTTTCAATAGAGCTTTTGGTTCAGAAGTCATGG
GTTTTGTAGAGCCAAGAAATTTCGATGGAGTTACGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAACTTGCAGGAAATTGCATAAG
GCACTGAAGGAGAAACCGAAAGAGATGACTGACGACGATTGGGAAGCTCTTGATGAAGAGGTAGTTTCAAGCATAAGGATGTGCTTATCAATGGATGTGGCAAGTCTAGT
GGCCCATGAGACAACTATGGTTAAATTGATGGACGCACTTACAAACAGTTGGGAAACGATGAAGACAGCAGTGTCTAATTCGACTGCAAATAACACTTTAAAATTTTCAG
AAGTTTGTGATTTAGCCATAGCAGAGGAAATTCGTAGACAGGGTAGTAATAAGGAGTCTACAGTAGGGTCAGCTTTGGCCATGAATAAAGGTAAAGATAAGGTTAATGAA
GATAATGAACCGAGTAGCAGTAGGAAAAGGTGGAAAAATAGGAATGAGGTAGAATGTTTTTACTGCCACAAGAAAGGTCACTTCAAGAGTCGGTGTAGAAAACATAAAGA
GGATCAGAAAAGAAAACACGAGGCAAATACAGTGTATGATGCCTTAGTTTGTGTTGAGAGTAACACAAAGTGTAGTAACCACTCATCAGATTGGATATTAGATAGTGCAG
CGTCTGTACACATAGTTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGACATCATGGTCTAGTGAGGATGGGGAATGGTAGAACCTCCAAAACCAGTGGGATTGGA
GATGTAAGTCTGAAGACAGAGTGTGGAGACAAATTAGTACTGCGAGATGTCAGATTTGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAATTGGTAGATGATGG
TTACAGGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCACGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAAATGTAAGTTGGATGTTGCCA
AAAGATCAAGGAGACAGTGGATGCCGGTTAAAGCTGCAGATGATCCAGCAGCAAAGATAGCCAATTTCGATCAGTCTGATCACGATCCTTCAATTCAGAAACAATTGGGA
AGTCCAAGAGATGGCTATCGTGAATCCCCAATTGTCAGATGCTCGAATGAATTGAAGAAGTCTCTTAGGCGAGTAGAGGCATCAAAGTGGAAGGCCAAAGCAGTTGGTCA
GGTCTCTAGCTTGGCAACAGGTTTGAATAGAGGATTCAAGCCATTCTTCTTCGAGAACAGTCGTTCAATTTGGAAGAAGATAACAGGAGTCACCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCCGATCACTGGTGCAGCCGATCGGGCAGAAGAGGCTGACGAACGTGGCGGTGGTTCGTTTGAAGAGACACGGTCTCCGCTTCGAGATTGCCTGTTACAAGAACAA
GGACGGTTGTTTGGTTGATGAGTTAAAATTCTGCCTGCTTTATGCGGGTGCCACCTTTACAAGAGATGATCCTTACTGTTTCAATAGAGCTTTTGGTTCAGAAGTCATGG
GTTTTGTAGAGCCAAGAAATTTCGATGGAGTTACGAAGTTCGATGGGAAAAATTTTGGATATTGGAAGATGCAAGTCAAGGATTATTTAACTTGCAGGAAATTGCATAAG
GCACTGAAGGAGAAACCGAAAGAGATGACTGACGACGATTGGGAAGCTCTTGATGAAGAGGTAGTTTCAAGCATAAGGATGTGCTTATCAATGGATGTGGCAAGTCTAGT
GGCCCATGAGACAACTATGGTTAAATTGATGGACGCACTTACAAACAGTTGGGAAACGATGAAGACAGCAGTGTCTAATTCGACTGCAAATAACACTTTAAAATTTTCAG
AAGTTTGTGATTTAGCCATAGCAGAGGAAATTCGTAGACAGGGTAGTAATAAGGAGTCTACAGTAGGGTCAGCTTTGGCCATGAATAAAGGTAAAGATAAGGTTAATGAA
GATAATGAACCGAGTAGCAGTAGGAAAAGGTGGAAAAATAGGAATGAGGTAGAATGTTTTTACTGCCACAAGAAAGGTCACTTCAAGAGTCGGTGTAGAAAACATAAAGA
GGATCAGAAAAGAAAACACGAGGCAAATACAGTGTATGATGCCTTAGTTTGTGTTGAGAGTAACACAAAGTGTAGTAACCACTCATCAGATTGGATATTAGATAGTGCAG
CGTCTGTACACATAGTTTCAGATAGGAGTTTGTTCACATCATTCACAGGAGGACATCATGGTCTAGTGAGGATGGGGAATGGTAGAACCTCCAAAACCAGTGGGATTGGA
GATGTAAGTCTGAAGACAGAGTGTGGAGACAAATTAGTACTGCGAGATGTCAGATTTGTGCCTAATATCAAGATGAATCTTATTTCTATTGGTAAATTGGTAGATGATGG
TTACAGGTGTGAGTTTGGTAGTCGCCAGTGTAAACTCACGTTCGGATCCCAGGTAGTGGCAGTTGGTCACAGGAAATCTACACTGTACAAATGTAAGTTGGATGTTGCCA
AAAGATCAAGGAGACAGTGGATGCCGGTTAAAGCTGCAGATGATCCAGCAGCAAAGATAGCCAATTTCGATCAGTCTGATCACGATCCTTCAATTCAGAAACAATTGGGA
AGTCCAAGAGATGGCTATCGTGAATCCCCAATTGTCAGATGCTCGAATGAATTGAAGAAGTCTCTTAGGCGAGTAGAGGCATCAAAGTGGAAGGCCAAAGCAGTTGGTCA
GGTCTCTAGCTTGGCAACAGGTTTGAATAGAGGATTCAAGCCATTCTTCTTCGAGAACAGTCGTTCAATTTGGAAGAAGATAACAGGAGTCACCACTTAG
Protein sequenceShow/hide protein sequence
MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKDGCLVDELKFCLLYAGATFTRDDPYCFNRAFGSEVMGFVEPRNFDGVTKFDGKNFGYWKMQVKDYLTCRKLHK
ALKEKPKEMTDDDWEALDEEVVSSIRMCLSMDVASLVAHETTMVKLMDALTNSWETMKTAVSNSTANNTLKFSEVCDLAIAEEIRRQGSNKESTVGSALAMNKGKDKVNE
DNEPSSSRKRWKNRNEVECFYCHKKGHFKSRCRKHKEDQKRKHEANTVYDALVCVESNTKCSNHSSDWILDSAASVHIVSDRSLFTSFTGGHHGLVRMGNGRTSKTSGIG
DVSLKTECGDKLVLRDVRFVPNIKMNLISIGKLVDDGYRCEFGSRQCKLTFGSQVVAVGHRKSTLYKCKLDVAKRSRRQWMPVKAADDPAAKIANFDQSDHDPSIQKQLG
SPRDGYRESPIVRCSNELKKSLRRVEASKWKAKAVGQVSSLATGLNRGFKPFFFENSRSIWKKITGVTT