; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038318 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038318
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:15163362..15164036
RNA-Seq ExpressionLag0038318
SyntenyLag0038318
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006484927.1 uncharacterized protein LOC102626623 [Citrus sinensis]7.2e-3339.89Show/hide
Query:  DELVVRWNKLNLSTEESAAVR----ITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPW
        +EL+ R   + L  EE  AV     +  DG  ++      C VGK+L ++  N +  R  M+  WK  +  ++E  GDNIF+ +F +  +K RVL  GPW
Subjt:  DELVVRWNKLNLSTEESAAVR----ITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPW

Query:  SFDESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
         FD++L VLV P    +I   PFTH SFWVQIHG+P++C+       LG  +G +EE++ DEEG   GP  R+R+S+++ KPL
Subjt:  SFDESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-3943.33Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MDE+   W     + +E+  V I R    ++ D+V+LC V KL +SK  + +A R+VM+SVW+VH +TR E  G NI+++ F+S  EK RVL+SGPW+F+
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
        +SL VL SP       D+ F   +FW+QIH +P +C++  +A +LG+ LG +EEI+ D    W GP +R+RV I+++KPL
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.9e-4144.69Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MDE+   W    L+ E+   + I  +   ++P++VQ  AVGKL +SK  +++AFR+VM+S+WKVH +T IE AG N++++ F+S  EK RVL SGPWSF+
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKP
         SL VL SP       D+ F   + W+QIH +P QC+  ++A+ LG+ +G +EEIDC+    WTGP +R+RV I+++KP
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKP

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.8e-3641.11Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MD++   W    L  EE   + I      ++ D++QLCAVGKL  SK   ++AF +VM+ VWK+H +TRIE AG NI+++ F++  EK+RV + GPW+FD
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
        +SL +LV         DI  +  +FWVQIH +  +C+  ++A+ LG+ LG +EE+D      W  P + +RV IN+ KPL
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]2.2e-3445.51Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MDE+   W   NL+ EE     +      ++ +++QLC VGKL +SK  +  A  +VM+ VWK+H +TRIE AG NI+++ F++  EK RVL+SGPW+FD
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEID
        +SLFVLVSP       D+ F   +FWVQIH +P + L  ++A+LLG  LG +EE+D
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEID

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)2.3e-2935.2Show/hide
Query:  DELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFDE
        +EL+ R   + LS EE   V             +  C VGK+L ++  +++  +  M+ VW+  R  +IE  G+N+FM +F S  +K  ++  GPW FD 
Subjt:  DELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFDE

Query:  SLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
        +L  L  P    +I    F+H SFWVQIH VP+ C++ ++A  LG  +G +EE++ D  G   G  +RLR+S+++ KPL
Subjt:  SLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL

A0A6J1D765 uncharacterized protein LOC1110179026.6e-4043.33Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MDE+   W     + +E+  V I R    ++ D+V+LC V KL +SK  + +A R+VM+SVW+VH +TR E  G NI+++ F+S  EK RVL+SGPW+F+
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
        +SL VL SP       D+ F   +FW+QIH +P +C++  +A +LG+ LG +EEI+ D    W GP +R+RV I+++KPL
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL

A0A6J1DP89 uncharacterized protein LOC1110229329.2e-4244.69Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MDE+   W    L+ E+   + I  +   ++P++VQ  AVGKL +SK  +++AFR+VM+S+WKVH +T IE AG N++++ F+S  EK RVL SGPWSF+
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKP
         SL VL SP       D+ F   + W+QIH +P QC+  ++A+ LG+ +G +EEIDC+    WTGP +R+RV I+++KP
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKP

A0A6J1DVS4 uncharacterized protein LOC1110235558.9e-3741.11Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MD++   W    L  EE   + I      ++ D++QLCAVGKL  SK   ++AF +VM+ VWK+H +TRIE AG NI+++ F++  EK+RV + GPW+FD
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
        +SL +LV         DI  +  +FWVQIH +  +C+  ++A+ LG+ LG +EE+D      W  P + +RV IN+ KPL
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL

A0A6J1DYG3 uncharacterized protein LOC1110246761.1e-3445.51Show/hide
Query:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD
        MDE+   W   NL+ EE     +      ++ +++QLC VGKL +SK  +  A  +VM+ VWK+H +TRIE AG NI+++ F++  EK RVL+SGPW+FD
Subjt:  MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFD

Query:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEID
        +SLFVLVSP       D+ F   +FWVQIH +P + L  ++A+LLG  LG +EE+D
Subjt:  ESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein1.0e-0537.14Show/hide
Query:  VLASGPWSFDESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEE
        VL  GPW+F++ + +L     +  I   PF    FWVQI G+P Q LN  V   +G  LG + + D + E
Subjt:  VLASGPWSFDESLFVLVSPDVDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEE

AT5G36228.1 nucleic acid binding;zinc ion binding4.1e-1025.17Show/hide
Query:  SVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFDESLFVLVSPDVDANIADIPFTHESFWVQIHGVP
        S +L  +G++L+ +  +++     +   W +       +  D  F V+FRS  + L  L   PW F+E  F+ +    D    D   T    WV I G+P
Subjt:  SVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFDESLFVLVSPDVDANIADIPFTHESFWVQIHGVP

Query:  LQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL
        L  ++     ++ S LG +  +D +EE +     +R++V ++  +PL
Subjt:  LQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAACTTGTTGTTCGTTGGAATAAGTTGAATCTTTCTACAGAAGAATCTGCTGCTGTGCGAATTACACGTGATGGTTCTTTTATTTCTCCGGATTCCGTTCAATT
GTGTGCAGTGGGCAAACTTCTTTCAAGTAAGATAGCGAATCTTGATGCTTTTCGTAATGTTATGCGTTCTGTTTGGAAAGTGCATAGGGCCACGCGAATCGAAGTAGCAG
GTGATAATATCTTTATGGTTCAGTTCCGCTCCAGTTTTGAAAAACTGCGGGTCCTAGCGTCGGGTCCTTGGTCTTTTGACGAATCTTTGTTTGTTCTGGTCTCGCCGGAT
GTGGATGCTAATATTGCTGACATTCCGTTTACCCATGAGTCCTTTTGGGTGCAGATCCATGGGGTTCCGTTACAGTGTCTTAATGGAAATGTGGCTCGTCTGCTCGGGTC
GCACCTGGGAGCGATTGAGGAAATTGATTGTGATGAAGAGGGTTCTTGGACTGGTCCTGTGATGCGCTTACGAGTTTCCATTAATCTGGCTAAGCCTCTCGTCGGGTGGT
TTTACTTCAAATCGATGATGGTAAAGATTTATGGTGTCCGGTTCAGTACGAGCGTCTTCCTGATTTATGTTATACTTGTGGATTATTGGGCCATGTTTCACAAGAGTGCG
CTACTCGACCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAACTTGTTGTTCGTTGGAATAAGTTGAATCTTTCTACAGAAGAATCTGCTGCTGTGCGAATTACACGTGATGGTTCTTTTATTTCTCCGGATTCCGTTCAATT
GTGTGCAGTGGGCAAACTTCTTTCAAGTAAGATAGCGAATCTTGATGCTTTTCGTAATGTTATGCGTTCTGTTTGGAAAGTGCATAGGGCCACGCGAATCGAAGTAGCAG
GTGATAATATCTTTATGGTTCAGTTCCGCTCCAGTTTTGAAAAACTGCGGGTCCTAGCGTCGGGTCCTTGGTCTTTTGACGAATCTTTGTTTGTTCTGGTCTCGCCGGAT
GTGGATGCTAATATTGCTGACATTCCGTTTACCCATGAGTCCTTTTGGGTGCAGATCCATGGGGTTCCGTTACAGTGTCTTAATGGAAATGTGGCTCGTCTGCTCGGGTC
GCACCTGGGAGCGATTGAGGAAATTGATTGTGATGAAGAGGGTTCTTGGACTGGTCCTGTGATGCGCTTACGAGTTTCCATTAATCTGGCTAAGCCTCTCGTCGGGTGGT
TTTACTTCAAATCGATGATGGTAAAGATTTATGGTGTCCGGTTCAGTACGAGCGTCTTCCTGATTTATGTTATACTTGTGGATTATTGGGCCATGTTTCACAAGAGTGCG
CTACTCGACCCCTAG
Protein sequenceShow/hide protein sequence
MDELVVRWNKLNLSTEESAAVRITRDGSFISPDSVQLCAVGKLLSSKIANLDAFRNVMRSVWKVHRATRIEVAGDNIFMVQFRSSFEKLRVLASGPWSFDESLFVLVSPD
VDANIADIPFTHESFWVQIHGVPLQCLNGNVARLLGSHLGAIEEIDCDEEGSWTGPVMRLRVSINLAKPLVGWFYFKSMMVKIYGVRFSTSVFLIYVILVDYWAMFHKSA
LLDP