; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038331 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038331
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr2:15513600..15514556
RNA-Seq ExpressionLag0038331
SyntenyLag0038331
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.4e-3429.45Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF--VSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVV
        M IP+KI++F WRL  +RLPT  NL  RG++I   C  C  + E+  H+FW C   +++W  SKF  +S +L L + +         + + + DFE + V
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF--VSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVV

Query:  FWWAVWNLSNKLVWGGDTDE-----RNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEV
          W +WN  N   +   T         L++WA++Y   +R++ +  +         +  +   W PP    +K+N DA         G   ++ N RG+V
Subjt:  FWWAVWNLSNKLVWGGDTDE-----RNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEV

Query:  MLVACARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHY
        M  A   L N+ +VD+AE +A + G+Q+A ++G                ++    D SE G I  + K    Q       F  R+GN AAH +A  A   
Subjt:  MLVACARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHY

Query:  VDF-IWLEEWSIEASDVFCRELISLK
         +F IW+E+W +E     C E+  L+
Subjt:  VDF-IWLEEWSIEASDVFCRELISLK

XP_023904177.1 uncharacterized protein LOC112015942 [Quercus suber]4.9e-3533.12Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFW
        M++P+KI+IF WR     LPT+ NL  R +     C +C  S EN  HV W+CPV + +W  S+       L   + V +   L  R++ +D  L +V  
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFW

Query:  WAVWNLSNKLVWGGDTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACAR
        W +W+  N ++ GG   E     W ++    + +  A+     D  Q P A     W PPA   FK+N DA +  +SG++G   V+RN  GEVM    A 
Subjt:  WAVWNLSNKLVWGGDTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACAR

Query:  LPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFT--PRKGNLAAHTMASLAFHY-VDFI
         P+V + D AE LA  + ++ A D GF+   +E DS  ++K L+    D S VG +   IK L+    L RV F+   R  N  AH +A  A     D  
Subjt:  LPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFT--PRKGNLAAHTMASLAFHY-VDFI

Query:  WLEEWSIEASDVFCRELISL
        W+E+    A D    + IS+
Subjt:  WLEEWSIEASDVFCRELISL

XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]5.4e-3432.46Show/hide
Query:  IPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFWWA
        IP+KI++F WR  H+ LPT+ NL  + + +   C LC  + E+  H  W+C + + +W  S           L+FV++L  L DR+++ + E  +V  W 
Subjt:  IPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFWWA

Query:  VWNLSNKLVWGGDTDERN-LMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVAS----WCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVA
        +WN  N++++GG   E   L + A   I+ ++ S A  LQ  D   G +   + +    W PP    +KLN DA V   S  +G   V+RN  G+VM   
Subjt:  VWNLSNKLVWGGDTDERN-LMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVAS----WCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVA

Query:  CARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHY-VDF
          + P V   +VAE LA  + ++ A D GF+   VE DS    K +       S +G +   I+ LLR      V  T R GN  A  +A  A++  VD 
Subjt:  CARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHY-VDF

Query:  IWLEE
         W+EE
Subjt:  IWLEE

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]1.2e-3333.11Show/hide
Query:  IPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFWWA
        +P+K+++F WR  H  LPT  NL  R +     C +C   SE+  H  WDC  V+ +W  S            + V ++  L +R+++ + +L     W 
Subjt:  IPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFWWA

Query:  VWNLSNKLVWGGDTD-ERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACARL
        VW   N L+ GG      +L   A EYI  +R++  + L      Q  S +    W PP   EFKLN DA V  + G+TG   ++RN +GEVM    A  
Subjt:  VWNLSNKLVWGGDTD-ERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACARL

Query:  PNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYV--DFIWL
        P V N D AE LA  + ++   D GFSR  VE D+  +   ++    +AS  G + D I  LLR      V  T R GN  AH +A  A + +  D  W+
Subjt:  PNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYV--DFIWL

Query:  EE
        E+
Subjt:  EE

XP_030941688.1 uncharacterized protein LOC115966628 [Quercus lobata]1.1e-3933.54Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWG-LKDRVDRQDFELIVVF
        + +P+KI+++ WR   + LPT+ NL  R +     C +C+++ E   H  W+CPV + +W  S  V +       + V  L+G L +R+ R++FEL +  
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWG-LKDRVDRQDFELIVVF

Query:  WWAVWNLSNKLVWGGD-TDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPS-AVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVA
         W +WN  N ++ GG   D   L + A  Y+  YR       Q  D    PS   SV  W PP +D +KLN DA +  E G +G   ++RN RGEVM   
Subjt:  WWAVWNLSNKLVWGGD-TDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPS-AVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVA

Query:  CARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYV--D
          + P VWN + AE LA  R ++ A   GF+   +E D+  ++K +  +  D S +G +   I+ L+       V    R  N  AH++A  A  YV  +
Subjt:  CARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYV--D

Query:  FIWLEEWSIEASDVFCRELISL
         IWLEE    ASD   ++L+SL
Subjt:  FIWLEEWSIEASDVFCRELISL

TrEMBL top hitse value%identityAlignment
A0A2N9J4C9 Uncharacterized protein1.0e-3026.42Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFW
        + +P+K+R F WR  H  LPT+ NL  R +     C  C  ++E   H  W C  ++++W    +    ++   LNF+ +       +   + +L  +  
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFW

Query:  WAVWNLSNKLVWGGD-TDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACA
        WA+W   N L           LM  A + +  ++ +       +  +  PS +   SW PP    +K+N D     E+ + G   V+RNH GEVM   C 
Subjt:  WAVWNLSNKLVWGGD-TDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACA

Query:  RLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDF-IW
        R+P   +V+  E  A    I+++RD+GF  F +E DS+ +V  L       +  G + +  K + + D     L T R GN+ AH++A  A     + +W
Subjt:  RLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDF-IW

Query:  LEEWSIEASDVFCRELIS
        +E    +   + C + I+
Subjt:  LEEWSIEASDVFCRELIS

A0A2P6SAP1 Putative RNA-directed DNA polymerase1.0e-3330.28Show/hide
Query:  IPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVD---RQDFELIVVF
        IP K+R+F WRL    LPTK  L  +     + CV C  + E+  H+F DC  +   W   +   + L +VD+   S+   +K+ +D        L  V+
Subjt:  IPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVD---RQDFELIVVF

Query:  WWAVWNLSNKLVWGGDT-DERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVAC
         W +W+  N LVW G   +  N  QWAS+++  Y+       Q     Q  S  + A W  P     K+N+D   +PESG  G   V+R+ +G  M    
Subjt:  WWAVWNLSNKLVWGGDT-DERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVAC

Query:  ARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLA-FHYVDFI
           PNV +    E  A   G+ +A    +  F +E+D   +V  LN++  D SEVG I D  K  L      ++    R+ N  A+ +A LA   +++ +
Subjt:  ARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLA-FHYVDFI

Query:  WLEEWSIEASDVFCREL
        WLEE  +   DV   +L
Subjt:  WLEEWSIEASDVFCREL

A0A6J1DAR4 uncharacterized protein LOC1110189542.6e-3429.45Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF--VSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVV
        M IP+KI++F WRL  +RLPT  NL  RG++I   C  C  + E+  H+FW C   +++W  SKF  +S +L L + +         + + + DFE + V
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF--VSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVV

Query:  FWWAVWNLSNKLVWGGDTDE-----RNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEV
          W +WN  N   +   T         L++WA++Y   +R++ +  +         +  +   W PP    +K+N DA         G   ++ N RG+V
Subjt:  FWWAVWNLSNKLVWGGDTDE-----RNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEV

Query:  MLVACARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHY
        M  A   L N+ +VD+AE +A + G+Q+A ++G                ++    D SE G I  + K    Q       F  R+GN AAH +A  A   
Subjt:  MLVACARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHY

Query:  VDF-IWLEEWSIEASDVFCRELISLK
         +F IW+E+W +E     C E+  L+
Subjt:  VDF-IWLEEWSIEASDVFCRELISLK

A0A7J9D462 Uncharacterized protein3.6e-3131.41Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF-VSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVF
        ++ PSKIRI  W+ + N +PT +NL +R +   + C  C    E+  H   DC     +W  SK  +    SLV+ N   + W LK+    + + LI V 
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF-VSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVF

Query:  WWAVWNLSNKLVWGGDTDE-RNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVAC
         WA+W   NK V          ++ +   +   YR S       A+  + P   S+  W PP    FK+NVDA V   + +    F++RN  G +M    
Subjt:  WWAVWNLSNKLVWGGDTDE-RNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVAC

Query:  ARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYV-DFI
         R   V +V +AE +A+L G+Q A DMGFSR  +E+DS+ +V  + +   D SE       +K L R+   CR  F  R+GN AAH +         D  
Subjt:  ARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYV-DFI

Query:  WLEEWSIEASDV
        W+E+  ++  +V
Subjt:  WLEEWSIEASDV

A0A7N2MTJ9 Uncharacterized protein2.9e-3330.33Show/hide
Query:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGL--KDRVDRQDFELIVV
        + +P K+R F WR   + LPTK NL+ R +     CV C    E   H+FW CP  + +W CSK V +       +F  ++W +   +R D  +   +V 
Subjt:  MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGL--KDRVDRQDFELIVV

Query:  FWWAVWNLSNKLVWGGD-TDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVA
          WA+W+  N++  GG       L++WAS+Y++ Y+ +  + L C    +   A  V SW PP+ + FK+NVD  V  +    G   ++R+ +G +    
Subjt:  FWWAVWNLSNKLVWGGD-TDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVA

Query:  CARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDFI
          ++        AE +A  +G+  ARD+G   F +E DS  +   L E  +  S V A+   I+ + R+          R+GN  AH +A  A   VDFI
Subjt:  CARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.9e-0638.78Show/hide
Query:  WRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMW
        W ++ NRL T++ L   G+ IP  C+LC S  E+  H+F++CP   ++W
Subjt:  WRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMW

AT1G45063.1 copper ion binding;electron carriers9.7e-0537.5Show/hide
Query:  RLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMW
        RL+ NRL   +  +  G+ +P  C+LC +  E   HVF+DCP    +W
Subjt:  RLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMW

AT4G03292.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-0529.17Show/hide
Query:  KLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLR
        K N D+     S  T   +++R   G  +L   A+L    +   AE L  L  +QV    G      ETD++ LV +LN D  D   +G +   I+  + 
Subjt:  KLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACARLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLR

Query:  QDSLCRVLFTPRKGNLAAHT
        +   C + F  R+ N AA T
Subjt:  QDSLCRVLFTPRKGNLAAHT

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-0422.09Show/hide
Query:  WRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCP---VVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFW----WAVW
        W ++ NRL T++ L   G+ IP  C+LC +  ++  H+F++C    VV   +  S  ++    L+D     + W L    ++    +I + +    +A+W
Subjt:  WRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCP---VVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFW----WAVW

Query:  NLSNKLVWGG-DTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFK
           N+ +  G      ++++     I++  D +++       A  P+A+S+   C P +  +K
Subjt:  NLSNKLVWGG-DTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFK

AT4G29090.1 Ribonuclease H-like superfamily protein8.7e-2225.93Show/hide
Query:  KIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF-VSVYLSLVDLNFVSVLW----GLKDRVDRQDFELIVVFW
        KI+ F W+   N LP    L +R +     C+ C S  E   H+ + C   +  W  S   + +     D  +V++ W    G  +    +  +L+    
Subjt:  KIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKF-VSVYLSLVDLNFVSVLW----GLKDRVDRQDFELIVVFW

Query:  WAVWNLSNKLVW-GGDTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACA
        W +W   N+LV+ G + + + +++ A + ++ +R    +   C    Q  +  S   W PP     K N DA    ++ + G  +VLRN +GEV  +   
Subjt:  WAVWNLSNKLVW-GGDTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACA

Query:  RLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDF
         LP + +V  AE  AM   +       ++    E+DSQ L++ILN D    S    I D ++ LL Q +  + +F PR+GN  A  +A  +  ++++
Subjt:  RLPNVWNVDVAEGLAMLRGIQVARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCCCCAGTAAAATCAGGATCTTTTTTTGGAGGCTCTCACATAACCGGTTGCCCACTAAGGAGAACCTTCTCTGGCGAGGTATGGATATTCCGTATACATGTGT
TTTGTGTGAATCTTCCTCTGAAAATTGTTTCCATGTGTTCTGGGACTGTCCGGTAGTTAAGTCTATGTGGTGTTGCTCCAAATTTGTATCTGTCTACCTCTCCTTAGTCG
ATTTAAACTTTGTGTCTGTACTGTGGGGGTTGAAGGATAGAGTTGATAGGCAGGATTTTGAGTTAATTGTTGTGTTCTGGTGGGCTGTGTGGAACCTAAGCAACAAACTG
GTTTGGGGGGGCGATACTGATGAGCGGAACTTAATGCAGTGGGCCTCGGAGTATATTCAGTCCTATCGGGACTCAGTGGCGAAAGGTTTGCAGTGTGCGGATGGTGCGCA
GGGGCCTTCGGCGGTTTCTGTGGCGTCGTGGTGTCCTCCAGCCTTGGATGAGTTTAAATTAAATGTAGATGCTGTCGTGAAACCCGAATCTGGTCAGACGGGGGGTAGTT
TTGTCCTTCGAAATCACCGAGGAGAGGTTATGTTAGTAGCTTGCGCACGGCTGCCCAACGTCTGGAACGTCGATGTGGCAGAAGGCTTGGCAATGTTAAGGGGCATTCAG
GTGGCTCGAGATATGGGTTTTTCCAGGTTCCATGTTGAGACTGATTCACAGTGGCTAGTCAAAATTCTGAATGAGGACTGGAGTGATGCTTCGGAAGTGGGTGCAATTGC
GGATCAGATTAAAGTTTTGCTTCGGCAAGATAGCTTGTGTAGAGTGTTATTTACCCCCAGGAAAGGTAATTTGGCAGCTCACACTATGGCCTCTTTGGCCTTTCATTATG
TTGATTTTATTTGGCTTGAGGAATGGTCCATTGAGGCCTCTGATGTATTTTGTCGTGAACTCATTTCATTAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATATCCCCAGTAAAATCAGGATCTTTTTTTGGAGGCTCTCACATAACCGGTTGCCCACTAAGGAGAACCTTCTCTGGCGAGGTATGGATATTCCGTATACATGTGT
TTTGTGTGAATCTTCCTCTGAAAATTGTTTCCATGTGTTCTGGGACTGTCCGGTAGTTAAGTCTATGTGGTGTTGCTCCAAATTTGTATCTGTCTACCTCTCCTTAGTCG
ATTTAAACTTTGTGTCTGTACTGTGGGGGTTGAAGGATAGAGTTGATAGGCAGGATTTTGAGTTAATTGTTGTGTTCTGGTGGGCTGTGTGGAACCTAAGCAACAAACTG
GTTTGGGGGGGCGATACTGATGAGCGGAACTTAATGCAGTGGGCCTCGGAGTATATTCAGTCCTATCGGGACTCAGTGGCGAAAGGTTTGCAGTGTGCGGATGGTGCGCA
GGGGCCTTCGGCGGTTTCTGTGGCGTCGTGGTGTCCTCCAGCCTTGGATGAGTTTAAATTAAATGTAGATGCTGTCGTGAAACCCGAATCTGGTCAGACGGGGGGTAGTT
TTGTCCTTCGAAATCACCGAGGAGAGGTTATGTTAGTAGCTTGCGCACGGCTGCCCAACGTCTGGAACGTCGATGTGGCAGAAGGCTTGGCAATGTTAAGGGGCATTCAG
GTGGCTCGAGATATGGGTTTTTCCAGGTTCCATGTTGAGACTGATTCACAGTGGCTAGTCAAAATTCTGAATGAGGACTGGAGTGATGCTTCGGAAGTGGGTGCAATTGC
GGATCAGATTAAAGTTTTGCTTCGGCAAGATAGCTTGTGTAGAGTGTTATTTACCCCCAGGAAAGGTAATTTGGCAGCTCACACTATGGCCTCTTTGGCCTTTCATTATG
TTGATTTTATTTGGCTTGAGGAATGGTCCATTGAGGCCTCTGATGTATTTTGTCGTGAACTCATTTCATTAAAGTAG
Protein sequenceShow/hide protein sequence
MDIPSKIRIFFWRLSHNRLPTKENLLWRGMDIPYTCVLCESSSENCFHVFWDCPVVKSMWCCSKFVSVYLSLVDLNFVSVLWGLKDRVDRQDFELIVVFWWAVWNLSNKL
VWGGDTDERNLMQWASEYIQSYRDSVAKGLQCADGAQGPSAVSVASWCPPALDEFKLNVDAVVKPESGQTGGSFVLRNHRGEVMLVACARLPNVWNVDVAEGLAMLRGIQ
VARDMGFSRFHVETDSQWLVKILNEDWSDASEVGAIADQIKVLLRQDSLCRVLFTPRKGNLAAHTMASLAFHYVDFIWLEEWSIEASDVFCRELISLK