; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038343 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038343
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:15755665..15756552
RNA-Seq ExpressionLag0038343
SyntenyLag0038343
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU21788.1 hypothetical protein TSUD_329120, partial [Trifolium subterraneum]2.1e-1542.59Show/hide
Query:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------
        A+ LGN VGTFE +D+ KE   +G  LR+RV +D+K+PL+RG+  ++    +E WVD ++E+LP FCF CGR GH  R+C + E  + D++ Y       
Subjt:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------

Query:  ---GAWLK
           G WL+
Subjt:  ---GAWLK

MCH80348.1 hypothetical protein [Trifolium medium]2.1e-1543.52Show/hide
Query:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------
        A+ LGN VGTFE +D  KE   +G  LR+RV +D+K+PL+RGT  ++    +E WVD ++E+LP FCF CGR GH  R+C + E  + D++ Y       
Subjt:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------

Query:  ---GAWLK
           G WL+
Subjt:  ---GAWLK

XP_028071384.1 uncharacterized protein LOC114273772 [Camellia sinensis]3.6e-1535.71Show/hide
Query:  IITEKKWAEDLGNAVGTFERVDLDKEEYEV--GNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLAREC----PETEAIN
        I+  KK  + +GNAVG F  +D+D E+  +  G ++ +RV +D+++PLRRG  + + ++ E  WVD ++E+LP +C+ CGR GH  REC       +   
Subjt:  IITEKKWAEDLGNAVGTFERVDLDKEEYEV--GNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLAREC----PETEAIN

Query:  RDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEE
         D L YGAWL+ D N ++K   + G++ KG       G+  P + N      EE
Subjt:  RDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEE

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.9e-1737.01Show/hide
Query:  IITEKKWAEDLGNAVGTFERVDLDKEEYEV--GNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPE----TEAIN
        ++  KK  E +GNAVG F  +D+D E+  +  G ++R+RV +D+++PLRRG  + + ++AE  WVD ++E+LP +C+ CGR GH  REC +     +   
Subjt:  IITEKKWAEDLGNAVGTFERVDLDKEEYEV--GNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPE----TEAIN

Query:  RDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEE
         D L YGAWL+ D N ++K   + G++ KG       G+  P + N      EE
Subjt:  RDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEE

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]2.5e-1635.71Show/hide
Query:  IITEKKWAEDLGNAVGTFERVDLDKEEYEV--GNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPE----TEAIN
        ++  K+  + +GNAVG F  +D+D E+  +  G ++R+RV ID+++PLRRG  + + ++A+  WVD ++E+LP +C+ CGR GH  REC +     +   
Subjt:  IITEKKWAEDLGNAVGTFERVDLDKEEYEV--GNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPE----TEAIN

Query:  RDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEE
         D L YGAWL+ D N ++K   + G++ KG       G+  P + N      EE
Subjt:  RDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEE

TrEMBL top hitse value%identityAlignment
A0A2Z6LV25 Uncharacterized protein (Fragment)1.0e-1542.59Show/hide
Query:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------
        A+ LGN VGTFE +D+ KE   +G  LR+RV +D+K+PL+RG+  ++    +E WVD ++E+LP FCF CGR GH  R+C + E  + D++ Y       
Subjt:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------

Query:  ---GAWLK
           G WL+
Subjt:  ---GAWLK

A0A392M033 CCHC-type domain-containing protein (Fragment)1.0e-1543.52Show/hide
Query:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------
        A+ LGN VGTFE +D  KE   +G  LR+RV +D+K+PL+RGT  ++    +E WVD ++E+LP FCF CGR GH  R+C + E  + D++ Y       
Subjt:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRDKLDY-------

Query:  ---GAWLK
           G WL+
Subjt:  ---GAWLK

A0A392MB81 Zinc CCHC-type-like protein (Fragment)1.9e-1443.82Show/hide
Query:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRD
        A+ LGN +GTFE +D+ KE   +G  LR+R  +D+++PL+RG+  +++   ++ WVD ++E+LP FCFGCGR GH  ++C E E  + D
Subjt:  AEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARECPETEAINRD

A0A803PUL2 Uncharacterized protein1.3e-1543.64Show/hide
Query:  KKWAEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLAREC----PETEAINRDKLDY
        K  AE LGN +G F  V  D      G+ LRVRV +   +PL RG MIR+    +E WVD R+E+LPEFCF CGR GH    C       ++ N D   Y
Subjt:  KKWAEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLAREC----PETEAINRDKLDY

Query:  GAWLKRDFNQ
        G W+K +F++
Subjt:  GAWLKRDFNQ

A0A803QC75 Uncharacterized protein1.5e-1442.86Show/hide
Query:  KKWAEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLAREC----PETEAINRDKLDY
        K  AE LGN +G F  V  D      G  LRVRV++ + +PL RG MI++    +E W+D R+E++PEFCF CG  GH   +C       ++ N D L Y
Subjt:  KKWAEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLAREC----PETEAINRDKLDY

Query:  GAWLK
        G WLK
Subjt:  GAWLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGACGAGCTAAGGAAGATCCAGGATCTGGAAAATGTACTGGTGTGCAAAATAATAACAGAGAAGAAATGGGCAGAGGATCTGGGCAATGCAGTGGGA
ACCTTTGAACGAGTTGACTTGGACAAGGAGGAGTACGAGGTTGGAAATTCCTTGAGGGTGAGAGTCAGGATTGATATCAAGAGGCCCTTGAGGAGAGGGACGATG
ATCAGAATCAGAACAAATGCGGAAGAAGAATGGGTAGATATGAGGTTTGAAAAACTCCCAGAATTTTGCTTTGGATGCGGGAGAACTGGCCACCTGGCAAGAGAA
TGTCCAGAAACTGAAGCCATTAACAGAGACAAACTGGACTATGGAGCATGGCTGAAAAGAGATTTCAATCAAAGAACGAAAATGGGAACCAAGACAGGCGCAGTT
CGAAAAGGCTATGAAGCAGGATTGAGAAAAGGGAAATCAAGACCAGAGCAAGAAAATAAAGATGACGATCCGCCAGAGGAGACGAACGGAACGACACCGGAAGAT
TTGAAAACCAGAAACCAGGGAGTAGTGAAGAAAACGACAAAAAAAAGGCTAGTGAGCAGGCATCGGGAAGTACAGAAGTTATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGACGAGCTAAGGAAGATCCAGGATCTGGAAAATGTACTGGTGTGCAAAATAATAACAGAGAAGAAATGGGCAGAGGATCTGGGCAATGCAGTGGGA
ACCTTTGAACGAGTTGACTTGGACAAGGAGGAGTACGAGGTTGGAAATTCCTTGAGGGTGAGAGTCAGGATTGATATCAAGAGGCCCTTGAGGAGAGGGACGATG
ATCAGAATCAGAACAAATGCGGAAGAAGAATGGGTAGATATGAGGTTTGAAAAACTCCCAGAATTTTGCTTTGGATGCGGGAGAACTGGCCACCTGGCAAGAGAA
TGTCCAGAAACTGAAGCCATTAACAGAGACAAACTGGACTATGGAGCATGGCTGAAAAGAGATTTCAATCAAAGAACGAAAATGGGAACCAAGACAGGCGCAGTT
CGAAAAGGCTATGAAGCAGGATTGAGAAAAGGGAAATCAAGACCAGAGCAAGAAAATAAAGATGACGATCCGCCAGAGGAGACGAACGGAACGACACCGGAAGAT
TTGAAAACCAGAAACCAGGGAGTAGTGAAGAAAACGACAAAAAAAAGGCTAGTGAGCAGGCATCGGGAAGTACAGAAGTTATCATGA
Protein sequenceShow/hide protein sequence
MEDDELRKIQDLENVLVCKIITEKKWAEDLGNAVGTFERVDLDKEEYEVGNSLRVRVRIDIKRPLRRGTMIRIRTNAEEEWVDMRFEKLPEFCFGCGRTGHLARE
CPETEAINRDKLDYGAWLKRDFNQRTKMGTKTGAVRKGYEAGLRKGKSRPEQENKDDDPPEETNGTTPEDLKTRNQGVVKKTTKKRLVSRHREVQKLS