; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038346 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038346
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr2:15783491..15784120
RNA-Seq ExpressionLag0038346
SyntenyLag0038346
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA94760.1 Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group]2.8e-0834.71Show/hide
Query:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED
        W  P  G  KLNVD S++A R +G +G  +RD+ GS ++A    +    +    E+RA +EGL++     A +  +R  PI++E+D + +VNLL   + D
Subjt:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED

Query:  LSEASFMVEDILKMKMEAEAV
        LSE + +V++I ++  E   V
Subjt:  LSEASFMVEDILKMKMEAEAV

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]8.8e-1038.03Show/hide
Query:  NLGGRSASEKKNQPSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPII
        NLGG    E KN P    W PPA   WKLNVDA+W      G +GW +RDSEG  I A               L+A+ + L + + I+          I 
Subjt:  NLGGRSASEKKNQPSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPII

Query:  VESDVLCVVNLLNGEDEDLSEASFMVEDILKMKMEAEAVSFF
        +ESD L VVN++N     L+E S +VEDI K +ME+  +  F
Subjt:  VESDVLCVVNLLNGEDEDLSEASFMVEDILKMKMEAEAVSFF

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]1.4e-1035.77Show/hide
Query:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED
        W PP    W LN DASW+    RG +GW +R  +G  + AG   +    ++K+LE  AI+EGL  L+ +   R      P+ +E+D   V +LLN + ED
Subjt:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED

Query:  LSEASFMVEDILKMKMEAEAVSF
        L++  ++VE+IL ++   E ++F
Subjt:  LSEASFMVEDILKMKMEAEAVSF

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]2.8e-0834.71Show/hide
Query:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED
        W  P  G  KLNVD S++A R +G +G  +RD+ GS ++A    +    +    E+RA +EGL++     A +  +R  PI++E+D + +VNLL   + D
Subjt:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED

Query:  LSEASFMVEDILKMKMEAEAV
        LSE + +V++I ++  E   V
Subjt:  LSEASFMVEDILKMKMEAEAV

XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]2.8e-0840.52Show/hide
Query:  PSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVL-CVVNLL
        P+   W+P  P  WKLN+DASWN+      +GW   D       AG+  + +   + +LE  AI  GL ILS+I  S        I+VESD L  V+NLL
Subjt:  PSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVL-CVVNLL

Query:  NGEDEDLSEASFMVED
        N +  DLSE SF  E+
Subjt:  NGEDEDLSEASFMVED

TrEMBL top hitse value%identityAlignment
A0A6J1D4B6 uncharacterized protein LOC1110171814.3e-1038.03Show/hide
Query:  NLGGRSASEKKNQPSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPII
        NLGG    E KN P    W PPA   WKLNVDA+W      G +GW +RDSEG  I A               L+A+ + L + + I+          I 
Subjt:  NLGGRSASEKKNQPSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPII

Query:  VESDVLCVVNLLNGEDEDLSEASFMVEDILKMKMEAEAVSFF
        +ESD L VVN++N     L+E S +VEDI K +ME+  +  F
Subjt:  VESDVLCVVNLLNGEDEDLSEASFMVEDILKMKMEAEAVSFF

A0A6J1DNV9 uncharacterized protein LOC1110224036.6e-1135.77Show/hide
Query:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED
        W PP    W LN DASW+    RG +GW +R  +G  + AG   +    ++K+LE  AI+EGL  L+ +   R      P+ +E+D   V +LLN + ED
Subjt:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED

Query:  LSEASFMVEDILKMKMEAEAVSF
        L++  ++VE+IL ++   E ++F
Subjt:  LSEASFMVEDILKMKMEAEAVSF

A2ZKD1 RNase H domain-containing protein1.7e-0635.14Show/hide
Query:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED
        W  P+ G  KLNVD S+ A   +G +G  +RDS G+ I+A    +    S    EL A  EG+       A        P IVE+D L V NL+  +++ 
Subjt:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED

Query:  LSEASFMVEDI
        LSE +F+V+++
Subjt:  LSEASFMVEDI

B8AFN2 RNase H domain-containing protein3.4e-0734.65Show/hide
Query:  ASEKKNQPSHAL-WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDV
        AS+    P+  L W  P  G  KLNVD S++A   +G +G  +RDS G+ I+A    + +       ELRA VEGL ++        +  + PI+VE+D 
Subjt:  ASEKKNQPSHAL-WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDV

Query:  LCVVNLLNGEDEDLSEASFMVEDILKM
        + VV LLN  + D SE + +V +  ++
Subjt:  LCVVNLLNGEDEDLSEASFMVEDILKM

Q2R147 Protein kinase domain containing protein, expressed1.4e-0834.71Show/hide
Query:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED
        W  P  G  KLNVD S++A R +G +G  +RD+ GS ++A    +    +    E+RA +EGL++     A +  +R  PI++E+D + +VNLL   + D
Subjt:  WNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLELRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDED

Query:  LSEASFMVEDILKMKMEAEAV
        LSE + +V++I ++  E   V
Subjt:  LSEASFMVEDILKMKMEAEAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTATTGGGAGTGGCTTCAGAGGAAGCTTTGCATCGAGGACTTGGAGCTGGCCATTCTTATAATATTAATTCCAAAGCAGTCAAACCTGGATAATTTGGGG
GGTAGATCCGCCAGTGAGAAGAAGAATCAGCCGAGTCATGCTCTGTGGAATCCGCCGGCTCCGGGAGAGTGGAAATTGAATGTTGACGCTTCTTGGAATGCCCTC
CGATCTCGAGGGAGGGTGGGTTGGACCATGCGTGACTCGGAAGGATCTCCAATCTACGCTGGTGTATGCCGAATTTTCAAATCGTGGTCGATCAAGATGTTGGAG
CTTAGGGCGATTGTGGAAGGTCTCCTAATCTTGTCGGCGATTAGAGCCTCAAGACCGAACCTGCGGATCCCGCCGATTATAGTGGAATCAGACGTCTTGTGCGTG
GTTAACCTTCTCAATGGAGAAGACGAGGACCTCTCGGAAGCTTCGTTTATGGTTGAGGATATTCTCAAAATGAAGATGGAAGCTGAAGCAGTCTCCTTTTTTTTG
TCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACTATTGGGAGTGGCTTCAGAGGAAGCTTTGCATCGAGGACTTGGAGCTGGCCATTCTTATAATATTAATTCCAAAGCAGTCAAACCTGGATAATTTGGGG
GGTAGATCCGCCAGTGAGAAGAAGAATCAGCCGAGTCATGCTCTGTGGAATCCGCCGGCTCCGGGAGAGTGGAAATTGAATGTTGACGCTTCTTGGAATGCCCTC
CGATCTCGAGGGAGGGTGGGTTGGACCATGCGTGACTCGGAAGGATCTCCAATCTACGCTGGTGTATGCCGAATTTTCAAATCGTGGTCGATCAAGATGTTGGAG
CTTAGGGCGATTGTGGAAGGTCTCCTAATCTTGTCGGCGATTAGAGCCTCAAGACCGAACCTGCGGATCCCGCCGATTATAGTGGAATCAGACGTCTTGTGCGTG
GTTAACCTTCTCAATGGAGAAGACGAGGACCTCTCGGAAGCTTCGTTTATGGTTGAGGATATTCTCAAAATGAAGATGGAAGCTGAAGCAGTCTCCTTTTTTTTG
TCCTAG
Protein sequenceShow/hide protein sequence
MDYWEWLQRKLCIEDLELAILIILIPKQSNLDNLGGRSASEKKNQPSHALWNPPAPGEWKLNVDASWNALRSRGRVGWTMRDSEGSPIYAGVCRIFKSWSIKMLE
LRAIVEGLLILSAIRASRPNLRIPPIIVESDVLCVVNLLNGEDEDLSEASFMVEDILKMKMEAEAVSFFLS