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Lag0038347 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038347
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:15787281..15788033
RNA-Seq ExpressionLag0038347
SyntenyLag0038347
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]4.6e-4445.41Show/hide
Query:  KVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKIS
        K+E ++ ++L DEE+ WK RS+ DWL  GD+NTK+FHSKAS R+RKN+I G+ ++ G W+D+   I      +F+ LF  S P +  I   L+G+  K+S
Subjt:  KVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKIS

Query:  DEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
         E N    + FT  +I  AL  M P+KAPGPDG+ A F+Q+ W I+GE  +K CL ILN+   ++ +N T I LI KV+ PR + +++PISLCNV+
Subjt:  DEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]4.6e-4442.86Show/hide
Query:  KVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKIS
        ++  E+ +LL+DEE  W  R+K  WL  GDRNTK+FH++AS+R+++N I GI +E G W D +  I + A +YF N++  S P +  I  V E +P K++
Subjt:  KVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKIS

Query:  DEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        +E N    + FT+ E+ VALK ++P+KAPGPDG+ A+F+Q++W I+G + + + L++LN    +  +NKT+I+LI K  NP+ ++ ++PISLCNV+
Subjt:  DEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]3.6e-4949.23Show/hide
Query:  VERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISD
        + +E+  LL+ EEI W+ RS+  WL LGDRNTK+FH+KAS R+R+N I GI +ENG W D    I KVA +YF+ ++  S P    I  VL+ +P  +++
Subjt:  VERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISD

Query:  EKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        E N    + FTR EIE AL  M+P+KAPGPDG+ A+F+Q++W+I+G D   + LD+LN    M  INKT+ITL+ K+KNP  +S ++PISLCNV+
Subjt:  EKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

XP_023901742.1 uncharacterized protein LOC112013579 [Quercus suber]1.7e-4343.81Show/hide
Query:  KVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKIS
        ++ +EL  LL+ EEI+W+ RSK  W   GDRNTK+FH++AS+R++KN I  +  E+GIW D    I   A +YF N++  S+P    I  V+  +P++++
Subjt:  KVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKIS

Query:  DEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCN
        DE N E +K+FT  E+  ALK ++P+KAPGPDG+ A F+  +WDI+G   + + L++LN    M  INKT+I+LI K   P  +++++PISLCN
Subjt:  DEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCN

XP_030940247.1 uncharacterized protein LOC115965211 [Quercus lobata]6.0e-4447.92Show/hide
Query:  ELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKN
        EL  LL  EE LW+ RSK  WL  GD+NT++FH KASQR RKN I+ +  +NG W D + +I ++  +Y+  LF  S P +  +  VLE +P+ +SD  N
Subjt:  ELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKN

Query:  REPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
         +  K F + E++VALK M P KAPGPDG+  +FYQ +WD +G+D S V L  LN G+    +N THITLI K+KNP  +S ++PISLCN++
Subjt:  REPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

TrEMBL top hitse value%identityAlignment
A0A2N9EWI8 Uncharacterized protein3.8e-4447.92Show/hide
Query:  ELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKN
        EL SLL+ EEI W+ RS+  WL  GDRNT +FHS ASQRK+ N I GI +   +W  E+ +I  V  +YF  ++  + P   +I AV+  V + +S + N
Subjt:  ELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKN

Query:  REPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        +E  K FTR E+ +AL  M+PSKAPGPDG+ A+F+Q+FW I+G D +   LD LNKG  ++ +N THI LI KVK+P  ++ ++PISLCNV+
Subjt:  REPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

A0A2N9GPZ7 Reverse transcriptase domain-containing protein1.6e-4744.44Show/hide
Query:  LIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKK
        +++++ +L  LLE EEI W+ RS+  W+  GD+NTK+FH++ ++R+R N I G+ + +G+W  E  KI ++A +YF+ +F  S P  ESI  VL+G+   
Subjt:  LIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKK

Query:  ISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        +++  N +    FT+ E+ +ALK M P+KAPGPDG+ A+FYQ +WDI+G + ++  L IL+ G  +  IN THI LI KVKNP +++ ++PISLCNVI
Subjt:  ISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

A0A2N9IIR5 Uncharacterized protein2.2e-4443.72Show/hide
Query:  RLIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPK
        +++ +  EL  LL  EE +W  RS+  WL  GDRNT++FHS+ASQR+R+N I G+ +E+G W D+  +I ++A  YF++LF  + P E  I+ V   V +
Subjt:  RLIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPK

Query:  KISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
         +S++ N   ++ +T  E+E+A+K M P  APGPDG+  +FYQ FW ++GED +   L  LN G  ++ IN T+ITLI KVK+P ++++++PISLCNV+
Subjt:  KISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

A0A2N9IPS8 Reverse transcriptase domain-containing protein1.6e-4744.44Show/hide
Query:  LIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKK
        +++++ +L  LLE EEI W+ RS+  W+  GD+NTK+FH++ ++R+R N I G+ + +G+W  E  KI ++A +YF+ +F  S P  ESI  VL+G+   
Subjt:  LIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKK

Query:  ISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        +++  N +    FT+ E+ +ALK M P+KAPGPDG+ A+FYQ +WDI+G + ++  L IL+ G  +  IN THI LI KVKNP +++ ++PISLCNVI
Subjt:  ISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

A0A7N2L6Z9 Reverse transcriptase domain-containing protein3.4e-4545.64Show/hide
Query:  VERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISD
        V REL  LL+DEEI W  RSK  WL  GDRNTK+FH++AS+R+++N I G+ ++ G W ++   I   A  YF +++  S P    +  V   +P  I++
Subjt:  VERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISD

Query:  EKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        E N E ++ FTR EI  ALK ++P+K+PGPDG+ A+F+Q++WDI+G + S + L++LN G  ++ INKT+I LI K  NP+ ++ ++PISLCNVI
Subjt:  EKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein1.7e-0926.96Show/hide
Query:  LIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKA---SQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGV
        + K+  EL+  +E ++ L KI     W    +R  K     A    +++ KN+I  I  + G    +  +I      Y+++L+       E +   L+  
Subjt:  LIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKA---SQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGV

Query:  P-KKISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSK---YKPIS
           +++ E+    N+  T SEI   + S+   K+PGPDG  A FYQR+ + L     K+   I  +G       +  I LI   K  RD +K   ++PIS
Subjt:  P-KKISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSK---YKPIS

Query:  LCNV
        L N+
Subjt:  LCNV

P14381 Transposon TX1 uncharacterized 149 kDa protein1.0e-1425.86Show/hide
Query:  IRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKNREPNKSFTRSEIEV
        +RS+   L   DR +++F++   ++  + +I  +  E+G  +++   I   A ++++NLF P     ++   + +G+P  +S+ +        T  E+  
Subjt:  IRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKNREPNKSFTRSEIEV

Query:  ALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISL
        AL+ M  +K+PG DG+   F+Q FWD LG D  +V  +   KG       +  ++L+ K  + R +  ++P+SL
Subjt:  ALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein9.6e-1625.95Show/hide
Query:  EILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLF--DPSAPKEESIRAVLEGVPKKISDEKNREPNKSF
        E  ++ +S+  WL  GD NT++FH      + KN I+ +  ++ + ++   ++ ++   Y+ +L   D      +S++ + +  P + +D      +   
Subjt:  EILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEENGIWIDEDVKIGKVATNYFRNLF--DPSAPKEESIRAVLEGVPKKISDEKNREPNKSF

Query:  TRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI
        +  EI  A+ +M  +KAPGPD   A F+   W ++ + T     +    G  ++  N T ITLI KV     LS ++P+S C V+
Subjt:  TRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEGINKTHITLIQKVKNPRDLSKYKPISLCNVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCCATTCAGAAAGCAGGAGGAGCAAACATGAAAAAATCCCATGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGGCTTATCAAAGTGGAAAGAGAGTTAGAGAGTCTCCTCGAAGATGAGGAAATATTATGGAAGATTA
GATCTAAGGAGGATTGGCTTATTCTAGGGGATAGGAACACTAAATGGTTCCATTCAAAAGCATCCCAAAGAAAAAGAAAGAACGAAATCCAGGGCATAACTGAGGAGAAT
GGTATTTGGATTGACGAGGATGTAAAAATTGGTAAGGTGGCGACCAACTACTTCAGAAACCTCTTTGATCCTTCTGCCCCAAAAGAAGAGAGTATTAGAGCGGTGTTGGA
GGGGGTCCCTAAGAAAATCTCTGACGAGAAAAACAGGGAGCCGAACAAATCGTTCACGAGATCAGAGATTGAAGTGGCCCTAAAGTCCATGAACCCTTCAAAGGCTCCGG
GTCCTGACGGAGTCCACGCCATGTTCTATCAAAGATTCTGGGATATTTTGGGGGAAGATACTTCCAAAGTGTGTCTTGACATTTTGAATAAGGGCGCAGGGATGGAAGGG
ATAAACAAAACCCACATCACCCTTATCCAAAAGGTTAAGAACCCTAGAGACTTGTCCAAATATAAACCCATCAGCCTATGCAATGTCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCCATTCAGAAAGCAGGAGGAGCAAACATGAAAAAATCCCATGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGGCTTATCAAAGTGGAAAGAGAGTTAGAGAGTCTCCTCGAAGATGAGGAAATATTATGGAAGATTA
GATCTAAGGAGGATTGGCTTATTCTAGGGGATAGGAACACTAAATGGTTCCATTCAAAAGCATCCCAAAGAAAAAGAAAGAACGAAATCCAGGGCATAACTGAGGAGAAT
GGTATTTGGATTGACGAGGATGTAAAAATTGGTAAGGTGGCGACCAACTACTTCAGAAACCTCTTTGATCCTTCTGCCCCAAAAGAAGAGAGTATTAGAGCGGTGTTGGA
GGGGGTCCCTAAGAAAATCTCTGACGAGAAAAACAGGGAGCCGAACAAATCGTTCACGAGATCAGAGATTGAAGTGGCCCTAAAGTCCATGAACCCTTCAAAGGCTCCGG
GTCCTGACGGAGTCCACGCCATGTTCTATCAAAGATTCTGGGATATTTTGGGGGAAGATACTTCCAAAGTGTGTCTTGACATTTTGAATAAGGGCGCAGGGATGGAAGGG
ATAAACAAAACCCACATCACCCTTATCCAAAAGGTTAAGAACCCTAGAGACTTGTCCAAATATAAACCCATCAGCCTATGCAATGTCATTTAG
Protein sequenceShow/hide protein sequence
MRAIQKAGGANMKKSHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLIKVERELESLLEDEEILWKIRSKEDWLILGDRNTKWFHSKASQRKRKNEIQGITEEN
GIWIDEDVKIGKVATNYFRNLFDPSAPKEESIRAVLEGVPKKISDEKNREPNKSFTRSEIEVALKSMNPSKAPGPDGVHAMFYQRFWDILGEDTSKVCLDILNKGAGMEG
INKTHITLIQKVKNPRDLSKYKPISLCNVI