; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038370 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038370
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTolB protein-related isoform 1
Genome locationchr2:16012244..16012720
RNA-Seq ExpressionLag0038370
SyntenyLag0038370
Gene Ontology termsNA
InterPro domainsIPR011042 - Six-bladed beta-propeller, TolB-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575727.1 hypothetical protein SDJN03_26366, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6087.79Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP++SPT EH LTDGISVNFNAQF+ N QSIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGSD VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

KAG7014283.1 tolB, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-6087.79Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP++SPT EH LTDGISVNFNAQF+ N QSIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGSD VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

XP_022954120.1 uncharacterized protein LOC111456480 [Cucurbita moschata]2.9e-6087.79Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP++SPT EH LTDGISVNFNAQF+ N QSIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGSD VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

XP_022991715.1 uncharacterized protein LOC111488250 [Cucurbita maxima]3.2e-5987.02Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP++SPT EH LTDGISVNFNAQF+ N QSIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGS  VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

XP_023547812.1 uncharacterized protein LOC111806666 [Cucurbita pepo subsp. pepo]4.9e-6087.79Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP+NSPT EH LTDGISVNFNAQF+ N  SIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGSD VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

TrEMBL top hitse value%identityAlignment
A0A0A0K6G2 Uncharacterized protein2.1e-5380.15Show/hide
Query:  MDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRL
        MDN PTG V+FTTV   QYGFD FSVP+NS TVE +LTDGISVNFNAQFL N  S+VFISERSGS RIYLS+SP+S+PKLL SAPGSCFHDRPIV NGRL
Subjt:  MDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRL

Query:  YFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL
         FISAHENPHKP TSW+ALYST LDG D VTRLTPL
Subjt:  YFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL

A0A1S3CEJ8 uncharacterized protein LOC1034999821.1e-5480.15Show/hide
Query:  MDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRL
        MDN PTG V+FTT+   QYGFD FSV +NSPTVE RLTDGISVNFNAQFL N  S+VFISERSGS RIYLS+SP+S+PKLL SAPGSCFHDRPIVRNGRL
Subjt:  MDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRL

Query:  YFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL
         FISAHENPHKP TSW+ALYST LDG D +TRLTPL
Subjt:  YFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL

A0A5A7URS2 TolB protein-related isoform 11.1e-5480.15Show/hide
Query:  MDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRL
        MDN PTG V+FTT+   QYGFD FSV +NSPTVE RLTDGISVNFNAQFL N  S+VFISERSGS RIYLS+SP+S+PKLL SAPGSCFHDRPIVRNGRL
Subjt:  MDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRL

Query:  YFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL
         FISAHENPHKP TSW+ALYST LDG D +TRLTPL
Subjt:  YFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL

A0A6J1GRK1 uncharacterized protein LOC1114564801.4e-6087.79Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP++SPT EH LTDGISVNFNAQF+ N QSIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGSD VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

A0A6J1JTR3 uncharacterized protein LOC1114882501.5e-5987.02Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS
        PTGTVIFTTV R QYGFDTFSVP++SPT EH LTDGISVNFNAQF+ N QSIVFISERSGSPR+YLSNSP+SAPKLLPSAPGSCFHDRPI+RN RLYFIS
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIVRNGRLYFIS

Query:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP
        AHENPHKP TSWSALY TGLDGS  VTRLTP
Subjt:  AHENPHKPLTSWSALYSTGLDGSDPVTRLTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21670.1 LOCATED IN: cell wall, plant-type cell wall4.9e-1832.42Show/hide
Query:  ILFIFATSFTSPPMDNIPTGTVIFTTVDRLQYGFDTFSVPIN----SPTVEHRLTDGISVNFNAQFLQ-----------------NDQSIVFISERSGSP
        +L + + S   P + N    T++FTT+ R  + FD F++P +    SP  EHRLTDG S+NFN  F                    D  +++++ER+G+P
Subjt:  ILFIFATSFTSPPMDNIPTGTVIFTTVDRLQYGFDTFSVPIN----SPTVEHRLTDGISVNFNAQFLQ-----------------NDQSIVFISERSGSP

Query:  RIY--LSNSPDSAPKL-LPSAPG---------SCFHDRPIVRNGRLYFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL
         +   + +S +   ++ +P   G         +   D P++ NG L  +S HENP KP+ SW+A+YST L  +    RLTPL
Subjt:  RIY--LSNSPDSAPKL-LPSAPG---------SCFHDRPIVRNGRLYFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPL

AT1G21680.1 DPP6 N-terminal domain-like protein1.1e-0928.57Show/hide
Query:  TVIFTTVDRLQYGFDTFSVPINSP---TVEHRLTDGISVNFNAQF----------------LQNDQS----IVFISERSGSPRIYL--------------
        T+IFTT+ R  Y FD F++    P   + E R+TDG SVNFN  F                +Q + S    +++++ER+G+  +Y               
Subjt:  TVIFTTVDRLQYGFDTFSVPINSP---TVEHRLTDGISVNFNAQF----------------LQNDQS----IVFISERSGSPRIYL--------------

Query:  -----SNSPDSAPKL-----LPSAPGSCFHDRPIVRNGRLYFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTP
             + S    P L     L     + F D+P +    + ++S HE+  +P  SW+A+YST L  +    RLTP
Subjt:  -----SNSPDSAPKL-----LPSAPGSCFHDRPIVRNGRLYFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTP

AT4G01870.1 tolB protein-related5.8e-3558.52Show/hide
Query:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQS--IVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIV-RNGRLY
        P GT+IFTTV R  YGFD FS+ I + +VE RLTDG+SVNFNAQF+ ND+S  +VF+SER+GS RIY + S  S P+ +P AP S FHDRPI+ +N RLY
Subjt:  PTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQS--IVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPIV-RNGRLY

Query:  FISAHENPHKPLTSWSALYSTGLDGSD-PVTRLTP
        FISAHE P +   +WSALY+  L+ +   VTR+TP
Subjt:  FISAHENPHKPLTSWSALYSTGLDGSD-PVTRLTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACATCCTCTTCATTTTCGCAACTTCTTTCACTTCCCCCCCAATGGACAACATCCCCACCGGCACCGTCATCTTCACCACCGTCGACCGCCTCCAATACGGCTT
CGACACCTTCTCTGTTCCCATCAATTCCCCCACCGTCGAACATCGCCTCACCGACGGAATCTCCGTCAATTTCAACGCCCAATTCCTCCAAAACGACCAATCCATTGTCT
TCATCTCTGAACGATCCGGCTCCCCTAGAATTTACCTCTCAAATTCCCCCGATTCCGCCCCTAAATTGCTCCCCTCCGCTCCTGGAAGCTGCTTTCACGACCGACCCATC
GTCAGAAATGGTCGCCTCTATTTCATCTCCGCTCATGAAAACCCCCACAAGCCCTTAACGAGTTGGTCCGCTCTGTATTCGACCGGGTTGGACGGCTCCGATCCGGTGAC
CCGGCTCACTCCTCTATTTCAGTCCAGCGGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAACATCCTCTTCATTTTCGCAACTTCTTTCACTTCCCCCCCAATGGACAACATCCCCACCGGCACCGTCATCTTCACCACCGTCGACCGCCTCCAATACGGCTT
CGACACCTTCTCTGTTCCCATCAATTCCCCCACCGTCGAACATCGCCTCACCGACGGAATCTCCGTCAATTTCAACGCCCAATTCCTCCAAAACGACCAATCCATTGTCT
TCATCTCTGAACGATCCGGCTCCCCTAGAATTTACCTCTCAAATTCCCCCGATTCCGCCCCTAAATTGCTCCCCTCCGCTCCTGGAAGCTGCTTTCACGACCGACCCATC
GTCAGAAATGGTCGCCTCTATTTCATCTCCGCTCATGAAAACCCCCACAAGCCCTTAACGAGTTGGTCCGCTCTGTATTCGACCGGGTTGGACGGCTCCGATCCGGTGAC
CCGGCTCACTCCTCTATTTCAGTCCAGCGGTTTCTGA
Protein sequenceShow/hide protein sequence
MDNILFIFATSFTSPPMDNIPTGTVIFTTVDRLQYGFDTFSVPINSPTVEHRLTDGISVNFNAQFLQNDQSIVFISERSGSPRIYLSNSPDSAPKLLPSAPGSCFHDRPI
VRNGRLYFISAHENPHKPLTSWSALYSTGLDGSDPVTRLTPLFQSSGF