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Lag0038371 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038371
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotease Do-like 8, chloroplastic
Genome locationchr2:16019796..16023846
RNA-Seq ExpressionLag0038371
SyntenyLag0038371
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039504.1 protease Do-like 8 [Cucumis melo var. makuwa]8.5e-0587.5Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
TYK15258.1 protease Do-like 8 [Cucumis melo var. makuwa]8.5e-0587.5Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
XP_004148708.1 protease Do-like 8, chloroplastic [Cucumis sativus]2.5e-0484.38Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLI NQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
XP_008459309.1 PREDICTED: protease Do-like 8, chloroplastic [Cucumis melo]8.5e-0587.5Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
XP_038889170.1 protease Do-like 8, chloroplastic [Benincasa hispida]7.7e-0687.88Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQIH
        GRVVRA INVDF+PDLIANQLNV DGALILQ+H
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQIH
TrEMBL top hitse value%identityAlignment
A0A0A0KU67 PDZ domain-containing protein1.2e-0484.38Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLI NQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
A0A1S3C9Y8 protease Do-like 8, chloroplastic4.1e-0587.5Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
A0A5A7T7R2 Protease Do-like 84.1e-0587.5Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
A0A5D3CVJ7 Protease Do-like 84.1e-0587.5Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVDF+PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
A0A6J1BXM7 protease Do-like 8, chloroplastic2.0e-0484.38Show/hide
Query:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
        GRVVRA INVD +PDLIANQLNV DGALILQ+
Subjt:  GRVVRASINVDFSPDLIANQLNVCDGALILQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26170.1 ARM repeat superfamily protein2.6e-0459.26Show/hide
Query:  QIHLWSMDSNWFVVNEDDDIFSCRVSG
        Q+H WSMD N FV +ED+  +SCR+SG
Subjt:  QIHLWSMDSNWFVVNEDDDIFSCRVSG
AT5G39830.1 Trypsin family protein with PDZ domain1.5e-0458.06Show/hide
Query:  RVVRASINVDFSPDLIANQLNVCDGALILQI
        +V+RA IN++ +PD +ANQLNV +GAL+LQ+
Subjt:  RVVRASINVDFSPDLIANQLNVCDGALILQI
AT5G39830.2 Trypsin family protein with PDZ domain1.5e-0458.06Show/hide
Query:  RVVRASINVDFSPDLIANQLNVCDGALILQI
        +V+RA IN++ +PD +ANQLNV +GAL+LQ+
Subjt:  RVVRASINVDFSPDLIANQLNVCDGALILQI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTTGTTTTCACGTTTTTCCGGTGGTTGTGTGGTTTAGGCGCGCGGACAGTAGTTTTTGGGTCTTTCGGGACGTTTTCCCGGCGTGTCGTGTAGTGGCC
TTGGAGCGTGCTAGAAGTGTTGCAACAATTATACAAGTCGTCTACTCTGCTGCTCAAAAGAAATGTTGCAACAATTATACAAGTAGCCTTGGTAGAGTCGTTCGA
GCTAGCATAAATGTGGACTTTTCTCCCGACCTGATTGCAAATCAACTCAATGTCTGTGATGGAGCTCTAATCCTGCAGATTCATTTGTGGTCAATGGATTCCAAT
TGGTTTGTTGTGAATGAAGATGATGACATCTTTAGTTGTCGTGTTTCAGGATGTGTTAAGAGTATCACTTATCAAAAGACTTGTAAAATTCTTAACACTGGCTGG
CTTAGAGAGTATCACTTATCAAGACTTGCCAAAACCAAAGCAAAGGATAAGCTCCTTGCCAAGGAAGGTGCTCAAAGGGTGCTAAGTGATCGTTTTGAGTTTAGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTTGTTTTCACGTTTTTCCGGTGGTTGTGTGGTTTAGGCGCGCGGACAGTAGTTTTTGGGTCTTTCGGGACGTTTTCCCGGCGTGTCGTGTAGTGGCC
TTGGAGCGTGCTAGAAGTGTTGCAACAATTATACAAGTCGTCTACTCTGCTGCTCAAAAGAAATGTTGCAACAATTATACAAGTAGCCTTGGTAGAGTCGTTCGA
GCTAGCATAAATGTGGACTTTTCTCCCGACCTGATTGCAAATCAACTCAATGTCTGTGATGGAGCTCTAATCCTGCAGATTCATTTGTGGTCAATGGATTCCAAT
TGGTTTGTTGTGAATGAAGATGATGACATCTTTAGTTGTCGTGTTTCAGGATGTGTTAAGAGTATCACTTATCAAAAGACTTGTAAAATTCTTAACACTGGCTGG
CTTAGAGAGTATCACTTATCAAGACTTGCCAAAACCAAAGCAAAGGATAAGCTCCTTGCCAAGGAAGGTGCTCAAAGGGTGCTAAGTGATCGTTTTGAGTTTAGA
TGA
Protein sequenceShow/hide protein sequence
MEGCFHVFPVVVWFRRADSSFWVFRDVFPACRVVALERARSVATIIQVVYSAAQKKCCNNYTSSLGRVVRASINVDFSPDLIANQLNVCDGALILQIHLWSMDSN
WFVVNEDDDIFSCRVSGCVKSITYQKTCKILNTGWLREYHLSRLAKTKAKDKLLAKEGAQRVLSDRFEFR