; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038382 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038382
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:16416969..16417427
RNA-Seq ExpressionLag0038382
SyntenyLag0038382
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064635.1 hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]1.2e-1843.75Show/hide
Query:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR
        M+MMQ K++Y++ RF   KV  +K+ TT+ +L TA  QT KS+ + E ++F+           LSP     T + LSP Q+ARV+MLK +F  TILKAQ+
Subjt:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR

Query:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
         L   S+ D N         PK CSIQ++RR +RE+LDK+K   D N NLD+MR+F++L+
Subjt:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

KAE8647905.1 hypothetical protein Csa_000421, partial [Cucumis sativus]4.8e-2043.48Show/hide
Query:  QQMKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSP--------------TTVALSPTQSARVKMLKSRFAGTILKAQRA
        ++MKMMQTK++++ +    PKV  +K+TT  K     Q  +S  D E + FK  SP              T V LSP ++ARV++LK++F  TILKAQ+ 
Subjt:  QQMKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSP--------------TTVALSPTQSARVKMLKSRFAGTILKAQRA

Query:  LFPNSDIDCN-------FATPKTCSI-QDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
        L  NS+ D N        ATPKTCSI Q+++R +REALDK+    D N NLD+MREF+K++
Subjt:  LFPNSDIDCN-------FATPKTCSI-QDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

KAG6589050.1 hypothetical protein SDJN03_17615, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1637.78Show/hide
Query:  MKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKI--LSPTTVALSPTQSARVKMLKSRFAGTILKAQRAL-------------
        M+MMQTK++Y +   S+  V  S +TT  + S A +TN S+GDS+PS FK   +  T    SPT++ARV+MLK++F+ TI KAQ+AL             
Subjt:  MKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKI--LSPTTVALSPTQSARVKMLKSRFAGTILKAQRAL-------------

Query:  --------------FPN--------------SDIDCNFATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
                       PN              S I+   A+PK  S++++RR +REALD VK T + N NLD M+EF+ L+
Subjt:  --------------FPN--------------SDIDCNFATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

KGN61401.2 hypothetical protein Csa_006690, partial [Cucumis sativus]1.1e-1942.86Show/hide
Query:  QQMKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSP--------------TTVALSPTQSARVKMLKSRFAGTILKAQRA
        ++MKMMQTK++Y+ +    PKV  +K+TT  K     Q  +S+ D E + FK  SP              T V LSP ++ARV++LK++F  TILKAQ+ 
Subjt:  QQMKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSP--------------TTVALSPTQSARVKMLKSRFAGTILKAQRA

Query:  LFPNSDIDCN-------FATPKTCSI-QDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
        L  NS+ D N        ATPK CSI Q+++R +REALDK+    + N NLD+MREF+K++
Subjt:  LFPNSDIDCN-------FATPKTCSI-QDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

TYK19957.1 hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]1.2e-1843.75Show/hide
Query:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR
        M+MMQ K++Y++ RF   KV  +K+ TT+ +L TA  QT KS+ + E ++F+           LSP     T + LSP Q+ARV+MLK +F  TILKAQ+
Subjt:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR

Query:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
         L   S+ D N         PK CSIQ++RR +RE+LDK+K   D N NLD+MR+F++L+
Subjt:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ1 Uncharacterized protein8.2e-1843.04Show/hide
Query:  MKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSP--------------TTVALSPTQSARVKMLKSRFAGTILKAQRALF
        M+MMQTK++YI +    PKV  +K+T   K     Q  +S+GD E + FK LSP              T V LSP ++ARV++LK++F  TI KAQ+ L 
Subjt:  MKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSP--------------TTVALSPTQSARVKMLKSRFAGTILKAQRALF

Query:  PNSDIDCN-------FATPKTCSI-QDRRRVAREALDK-VKQTTDLNANLDAMREFQK
          S+ D N        ATPKTCSI Q+++R +REALDK +    D N NLD+M+EF++
Subjt:  PNSDIDCN-------FATPKTCSI-QDRRRVAREALDK-VKQTTDLNANLDAMREFQK

A0A0A0KRB6 Uncharacterized protein2.7e-1345Show/hide
Query:  QTNKSDGDSEPSQFKILSP------------TTVALSPTQSARVKMLKSRFAGTILKAQRALFPNSDIDCN------FATPKTCSIQDRRRVAREALDKV
        Q  +S+ D + + FK  SP            T V LSP ++ARV++LK++F  TILKAQ+ L  NS+ D N       ATP  CSIQ++R+  REALDK+
Subjt:  QTNKSDGDSEPSQFKILSP------------TTVALSPTQSARVKMLKSRFAGTILKAQRALFPNSDIDCN------FATPKTCSIQDRRRVAREALDKV

Query:  KQTTDLNANLDAMREFQKLI
            D N NLD+MREF KL+
Subjt:  KQTTDLNANLDAMREFQKLI

A0A5A7VFH7 Uncharacterized protein5.7e-1943.75Show/hide
Query:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR
        M+MMQ K++Y++ RF   KV  +K+ TT+ +L TA  QT KS+ + E ++F+           LSP     T + LSP Q+ARV+MLK +F  TILKAQ+
Subjt:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR

Query:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
         L   S+ D N         PK CSIQ++RR +RE+LDK+K   D N NLD+MR+F++L+
Subjt:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

A0A5D3D8Q3 Uncharacterized protein5.7e-1943.75Show/hide
Query:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR
        M+MMQ K++Y++ RF   KV  +K+ TT+ +L TA  QT KS+ + E ++F+           LSP     T + LSP Q+ARV+MLK +F  TILKAQ+
Subjt:  MKMMQTKKKYISHRFSSPKVHPSKL-TTIFKLSTAA-QTNKSDGDSEPSQFK----------ILSP-----TTVALSPTQSARVKMLKSRFAGTILKAQR

Query:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI
         L   S+ D N         PK CSIQ++RR +RE+LDK+K   D N NLD+MR+F++L+
Subjt:  ALFPNSDIDCNF------ATPKTCSIQDRRRVAREALDKVKQTTDLNANLDAMREFQKLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCAACAGATGAAGATGATGCAAACGAAAAAGAAATATATAAGTCACCGTTTTTCAAGTCCTAAGGTTCATCCGAGCAAACTTACAACAATCTTCAAACTGTCTAC
CGCTGCCCAAACCAACAAATCTGATGGTGATTCTGAACCATCCCAATTCAAAATTTTGTCACCAACAACTGTTGCTCTATCACCCACACAATCTGCTCGAGTAAAAATGT
TGAAATCAAGATTTGCTGGGACCATTTTGAAAGCTCAACGAGCACTTTTTCCCAATTCCGATATTGATTGCAATTTTGCTACTCCAAAGACATGCTCTATACAAGATCGA
AGACGAGTTGCAAGAGAAGCTCTAGACAAGGTCAAGCAAACGACTGATTTGAACGCAAATCTTGATGCTATGAGAGAGTTTCAAAAATTAATTGGACAAGATGAAGAAGA
TTTAGAATATATACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCAACAGATGAAGATGATGCAAACGAAAAAGAAATATATAAGTCACCGTTTTTCAAGTCCTAAGGTTCATCCGAGCAAACTTACAACAATCTTCAAACTGTCTAC
CGCTGCCCAAACCAACAAATCTGATGGTGATTCTGAACCATCCCAATTCAAAATTTTGTCACCAACAACTGTTGCTCTATCACCCACACAATCTGCTCGAGTAAAAATGT
TGAAATCAAGATTTGCTGGGACCATTTTGAAAGCTCAACGAGCACTTTTTCCCAATTCCGATATTGATTGCAATTTTGCTACTCCAAAGACATGCTCTATACAAGATCGA
AGACGAGTTGCAAGAGAAGCTCTAGACAAGGTCAAGCAAACGACTGATTTGAACGCAAATCTTGATGCTATGAGAGAGTTTCAAAAATTAATTGGACAAGATGAAGAAGA
TTTAGAATATATACTTTGA
Protein sequenceShow/hide protein sequence
MIQQMKMMQTKKKYISHRFSSPKVHPSKLTTIFKLSTAAQTNKSDGDSEPSQFKILSPTTVALSPTQSARVKMLKSRFAGTILKAQRALFPNSDIDCNFATPKTCSIQDR
RRVAREALDKVKQTTDLNANLDAMREFQKLIGQDEEDLEYIL