; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038410 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038410
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr2:16864333..16865388
RNA-Seq ExpressionLag0038410
SyntenyLag0038410
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0009987 - cellular process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025038.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-13672.33Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        +NH+EEAIYLFQEMQMVGLKPTEVTFAGLLDGCD AS+LKLGRQ+HCQV+K GFL G EM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRAC+GLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDV+SSV+VFHEM  +NSVVSWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF QME++SI+PDDVTFLGVLSACSHAGRVSEGRKIFD+MVSHYR+QPR+DHLGCMVDILGRWGFLNEAE FINRLG +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

XP_022935750.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita moschata]1.9e-13471.76Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        +NH+EEAIYLFQEMQMVGLKPTEVTFAGLLDGCD AS+LKLGRQ+HCQV+K GFL G EM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQA FASVLRAC+GLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDV+SSV+VFHEM  +NSVVSWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF QME++SI+PDDVTFLGVLSACSHAGRVSEGRKIFD+MVSHYR+QPR+DHLGCMVDILGRWGFLNEAE FINRL  +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

XP_022974928.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita maxima]8.4e-13571.76Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        +NH+EEAIYLFQEMQMVGLKPTEVTFAGLLDGCD AS+LK+GRQ+HCQV+K GFL G EM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRAC+GLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDV SSVQVFHEM  +NSVVSWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF +ME++SI+PDDVTFLGVLSACSHAGRV EGRKIFD+MVSHYR+QPR+DHLGCMVDILGRWGFLNEAE FINRLG +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

XP_023534935.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Cucurbita pepo subsp. pepo]5.3e-13772.05Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        MNH+EEAIYLF EMQMVGLKPTEVTFAGLLDGCD AS+LKLGRQ+HC+V+KWGFL G EM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRAC+GLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDV+SSV+VFHEM  +NSVVSWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF +ME++SI+PDDVTFLGVLSACSHAGRVSEGRKIFD+MVSHYR+QPR+DHLGCMVDILGRWGFLNEAE+FINRLG +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

XP_038899907.1 pentatricopeptide repeat-containing protein At3g09040, mitochondrial [Benincasa hispida]4.9e-13571.84Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        M+H+EEAIYLFQEMQMVG KPTEVTFA LLDGCD AS+LKLGRQIHCQVMKWG LFGSEM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRACAGLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDVKSSVQVFHEM  KNSV+SWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQME-KESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLW
        VGLAKNGY EEALEIF Q+E ++SI+PD+VTFLGVLSACSHAGRVSEGRKIF++MV+HY++QPR+DHLGCMVDILGRWGFLNEAE FINRLG +ADPMLW
Subjt:  VGLAKNGYVEEALEIFTQME-KESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLW

Query:  LTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
         TLLGACRKHGDEVRG+RAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  LTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

TrEMBL top hitse value%identityAlignment
A0A5A7TIQ6 Pentatricopeptide repeat-containing protein2.6e-12967.82Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        M+H+EEAI+LFQE+QMVGLKPTEVTFAGLLDGCD A ML LGRQIH QVMKWGFL  SEM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRACAG+SSL+  QE+HSLI HTGFNMDEITCS+LIDMYAKCGDVK S+QVFHEM  +NSV+SWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF QME++SI+PD+VTFLGVLSACSHAGRVSEGRK+FDLMV++Y++QPR+DHLGCMVDILGRWGFLNEAE FIN+LG +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKG
        TLLGACRKHGDEVRG+RAA KLMELKPQSSS YVLLS +Y  SENW G
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKG

A0A5D3D800 Pentatricopeptide repeat-containing protein2.6e-12967.82Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        M+H+EEAI+LFQE+QMVGLKPTEVTFAGLLDGCD A ML LGRQIH QVMKWGFL  SEM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRACAG+SSL+  QE+HSLI HTGFNMDEITCS+LIDMYAKCGDVK S+QVFHEM  +NSV+SWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF QME++SI+PD+VTFLGVLSACSHAGRVSEGRK+FDLMV++Y++QPR+DHLGCMVDILGRWGFLNEAE FIN+LG +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKG
        TLLGACRKHGDEVRG+RAA KLMELKPQSSS YVLLS +Y  SENW G
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKG

A0A6J1DD26 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g09040, mitochondrial1.1e-13270.69Show/hide
Query:  NHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGC-DRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        N ++EAI LFQEMQ+VGLKPTEVTFAGLLDGC + ASMLKLGRQIHCQVMKWGFLFG E+                                        
Subjt:  NHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGC-DRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQA FASVLRAC+GLSSL+N +E+HSLIL TGFNMDEI CSALIDMYAKCGDV+SS QVFHEM SKNSV+SWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALE+FTQME+ESI+PDDVTFLGVLSACSHAGRV+EGRKIFDLMV HY++QPR+DHLGCMVDILGRWGFLNEAE FI  LGFEADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKG
        TLLGACRKHGDEVRGRR AEKLMEL PQSSSPYVLLSSIY ASENWKG
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKG

A0A6J1FBI8 pentatricopeptide repeat-containing protein At3g09040, mitochondrial9.1e-13571.76Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        +NH+EEAIYLFQEMQMVGLKPTEVTFAGLLDGCD AS+LKLGRQ+HCQV+K GFL G EM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQA FASVLRAC+GLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDV+SSV+VFHEM  +NSVVSWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF QME++SI+PDDVTFLGVLSACSHAGRVSEGRKIFD+MVSHYR+QPR+DHLGCMVDILGRWGFLNEAE FINRL  +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

A0A6J1IHS2 pentatricopeptide repeat-containing protein At3g09040, mitochondrial4.1e-13571.76Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------
        +NH+EEAIYLFQEMQMVGLKPTEVTFAGLLDGCD AS+LK+GRQ+HCQV+K GFL G EM                                        
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEM----------------------------------------

Query:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI
                                DQATFASVLRAC+GLSSL+N QEIHSLI HTGFNMDEITCS+LIDMYAKCGDV SSVQVFHEM  +NSVVSWNSMI
Subjt:  ------------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMI

Query:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL
        VGLAKNGY EEALEIF +ME++SI+PDDVTFLGVLSACSHAGRV EGRKIFD+MVSHYR+QPR+DHLGCMVDILGRWGFLNEAE FINRLG +ADPMLW 
Subjt:  VGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWL

Query:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIY ASENWK
Subjt:  TLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

SwissProt top hitse value%identityAlignment
Q5G1T1 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic4.9e-5343.05Show/hide
Query:  TFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPD
        TFAS+L   A + S+   ++IHS ++  G + ++  C+ALI MY+KCG + ++ +VF+ M ++N V+SW SMI G AK+G+    LE F QM +E + P+
Subjt:  TFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPD

Query:  DVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKP
        +VT++ +LSACSH G VSEG + F+ M   ++I+P+++H  CMVD+L R G L +A  FIN + F+AD ++W T LGACR H +   G+ AA K++EL P
Subjt:  DVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKP

Query:  QSSSPYVLLSSIYVASENWKGVT
           + Y+ LS+IY  +  W+  T
Subjt:  QSSSPYVLLSSIYVASENWKGVT

Q9LFI1 Pentatricopeptide repeat-containing protein At3g53360, mitochondrial4.2e-5232.76Show/hide
Query:  HIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFL--------------FGSEM----------------------------
        + +EA+ +F +M+  G  P  ++   LL    +   L  G QIH  ++KWGFL              F S++                            
Subjt:  HIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFL--------------FGSEM----------------------------

Query:  ---------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGL
                             D  T  ++LR C  +SSL+   ++H   L TG   ++   + LIDMYAKCG +  + ++F  M +++ VVSW+++IVG 
Subjt:  ---------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGL

Query:  AKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLL
        A++G+ EEAL +F +M+   I P+ VTF+GVL+ACSH G V EG K++  M + + I P  +H  C+VD+L R G LNEAE FI+ +  E D ++W TLL
Subjt:  AKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLL

Query:  GACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGVTL
         AC+  G+    ++AAE ++++ P +S+ +VLL S++ +S NW+   L
Subjt:  GACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGVTL

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic1.9e-5237.89Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITC
        MN  +EA+ LFQEM   G  P +VT   +L  C     + +GR IH  + K        +   T AS LR                              
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITC

Query:  SALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRI
        ++LIDMYAKCGD++++ QVF+ +  K S+ SWN+MI G A +G  + + ++F++M K  I PDD+TF+G+LSACSH+G +  GR IF  M   Y++ P++
Subjt:  SALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRI

Query:  DHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGV
        +H GCM+D+LG  G   EAE  IN +  E D ++W +LL AC+ HG+   G   AE L++++P++   YVLLS+IY ++  W  V
Subjt:  DHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGV

Q9LSB8 Putative pentatricopeptide repeat-containing protein At3g159305.4e-5240.38Show/hide
Query:  VTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEM
        +++  ++DG  RA       +I  ++   G +     D+ T  SVL ACA L SLE  + I + I       D +  +ALIDMY KCG  + + +VFH+M
Subjt:  VTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEM

Query:  GSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFI
          ++   +W +M+VGLA NG  +EA+++F QM+  SI PDD+T+LGVLSAC+H+G V + RK F  M S +RI+P + H GCMVD+LGR G + EA   +
Subjt:  GSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFI

Query:  NRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
         ++    + ++W  LLGA R H DE     AA+K++EL+P + + Y LL +IY   + WK
Subjt:  NRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

Q9SS83 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial4.9e-8546.24Show/hide
Query:  NHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGF----------LFGSEM-------------------------------
        N++EEA+ LFQEM   G+ P+E+TFA +++ C +   L LG Q H Q+ K GF          L G  M                               
Subjt:  NHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGF----------LFGSEM-------------------------------

Query:  -----------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIV
                               DQATF +VLR C+ LSSL   + IHSLI H   ++DE+T + LIDMYAKCGD+K S QVF EM  +++VVSWNS+I 
Subjt:  -----------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIV

Query:  GLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLT
        G AKNGY E+AL+IF  M +  I+PD++TFLGVL+ACSHAG+VS+GRKIF++M+  Y I+ R+DH+ CMVD+LGRWG+L EA++FI     + D  LW +
Subjt:  GLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLT

Query:  LLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        LLGACR HGD++RG  +AEKL+EL+PQ+SS YVLLS+IY +   W+
Subjt:  LLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.3e-5337.89Show/hide
Query:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITC
        MN  +EA+ LFQEM   G  P +VT   +L  C     + +GR IH  + K        +   T AS LR                              
Subjt:  MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITC

Query:  SALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRI
        ++LIDMYAKCGD++++ QVF+ +  K S+ SWN+MI G A +G  + + ++F++M K  I PDD+TF+G+LSACSH+G +  GR IF  M   Y++ P++
Subjt:  SALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRI

Query:  DHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGV
        +H GCM+D+LG  G   EAE  IN +  E D ++W +LL AC+ HG+   G   AE L++++P++   YVLLS+IY ++  W  V
Subjt:  DHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGV

AT3G09040.1 Pentatricopeptide repeat (PPR) superfamily protein3.5e-8646.24Show/hide
Query:  NHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGF----------LFGSEM-------------------------------
        N++EEA+ LFQEM   G+ P+E+TFA +++ C +   L LG Q H Q+ K GF          L G  M                               
Subjt:  NHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGF----------LFGSEM-------------------------------

Query:  -----------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIV
                               DQATF +VLR C+ LSSL   + IHSLI H   ++DE+T + LIDMYAKCGD+K S QVF EM  +++VVSWNS+I 
Subjt:  -----------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIV

Query:  GLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLT
        G AKNGY E+AL+IF  M +  I+PD++TFLGVL+ACSHAG+VS+GRKIF++M+  Y I+ R+DH+ CMVD+LGRWG+L EA++FI     + D  LW +
Subjt:  GLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLT

Query:  LLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
        LLGACR HGD++RG  +AEKL+EL+PQ+SS YVLLS+IY +   W+
Subjt:  LLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein3.9e-5340.38Show/hide
Query:  VTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEM
        +++  ++DG  RA       +I  ++   G +     D+ T  SVL ACA L SLE  + I + I       D +  +ALIDMY KCG  + + +VFH+M
Subjt:  VTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEM

Query:  GSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFI
          ++   +W +M+VGLA NG  +EA+++F QM+  SI PDD+T+LGVLSAC+H+G V + RK F  M S +RI+P + H GCMVD+LGR G + EA   +
Subjt:  GSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFI

Query:  NRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK
         ++    + ++W  LLGA R H DE     AA+K++EL+P + + Y LL +IY   + WK
Subjt:  NRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWK

AT3G49170.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.5e-5443.05Show/hide
Query:  TFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPD
        TFAS+L   A + S+   ++IHS ++  G + ++  C+ALI MY+KCG + ++ +VF+ M ++N V+SW SMI G AK+G+    LE F QM +E + P+
Subjt:  TFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPD

Query:  DVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKP
        +VT++ +LSACSH G VSEG + F+ M   ++I+P+++H  CMVD+L R G L +A  FIN + F+AD ++W T LGACR H +   G+ AA K++EL P
Subjt:  DVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKP

Query:  QSSSPYVLLSSIYVASENWKGVT
           + Y+ LS+IY  +  W+  T
Subjt:  QSSSPYVLLSSIYVASENWKGVT

AT3G53360.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.0e-5332.76Show/hide
Query:  HIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFL--------------FGSEM----------------------------
        + +EA+ +F +M+  G  P  ++   LL    +   L  G QIH  ++KWGFL              F S++                            
Subjt:  HIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFL--------------FGSEM----------------------------

Query:  ---------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGL
                             D  T  ++LR C  +SSL+   ++H   L TG   ++   + LIDMYAKCG +  + ++F  M +++ VVSW+++IVG 
Subjt:  ---------------------DQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKCGDVKSSVQVFHEMGSKNSVVSWNSMIVGL

Query:  AKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLL
        A++G+ EEAL +F +M+   I P+ VTF+GVL+ACSH G V EG K++  M + + I P  +H  C+VD+L R G LNEAE FI+ +  E D ++W TLL
Subjt:  AKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAENFINRLGFEADPMLWLTLL

Query:  GACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGVTL
         AC+  G+    ++AAE ++++ P +S+ +VLL S++ +S NW+   L
Subjt:  GACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGVTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACATAGAGGAAGCCATATATCTATTTCAAGAGATGCAGATGGTTGGACTTAAACCCACAGAAGTTACATTTGCAGGGCTTTTAGATGGATGTGATCGAGCATC
TATGCTAAAACTAGGAAGGCAAATTCACTGTCAAGTTATGAAGTGGGGTTTTCTATTTGGTAGTGAAATGGACCAAGCAACATTTGCCAGTGTTCTTCGAGCATGTGCTG
GATTGTCTTCTTTAGAAAACAGTCAAGAGATTCATTCCCTTATCCTCCATACTGGCTTTAACATGGATGAAATAACCTGTAGTGCTCTTATAGACATGTATGCAAAATGT
GGCGATGTTAAAAGCTCCGTTCAGGTTTTTCATGAAATGGGAAGTAAAAACAGTGTCGTTTCTTGGAACTCCATGATAGTTGGACTTGCTAAGAATGGCTATGTGGAAGA
AGCACTAGAAATATTTACTCAAATGGAGAAAGAATCCATCCTGCCTGATGATGTCACATTCCTTGGTGTTCTTTCTGCTTGTAGCCATGCTGGGCGAGTGTCCGAAGGCC
GAAAGATCTTCGACTTGATGGTTAGCCATTACAGGATACAACCAAGAATTGATCATTTGGGTTGTATGGTAGACATTCTTGGGAGGTGGGGTTTCCTTAATGAAGCAGAG
AACTTCATCAACAGACTTGGATTCGAAGCAGATCCGATGCTCTGGTTGACTTTGCTTGGCGCTTGCAGAAAACATGGAGATGAAGTTAGGGGGAGGCGTGCAGCTGAGAA
ACTTATGGAGTTGAAACCACAAAGTTCTTCACCCTATGTGTTGCTTTCTAGCATATACGTTGCATCAGAGAATTGGAAAGGAGTCACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCACATAGAGGAAGCCATATATCTATTTCAAGAGATGCAGATGGTTGGACTTAAACCCACAGAAGTTACATTTGCAGGGCTTTTAGATGGATGTGATCGAGCATC
TATGCTAAAACTAGGAAGGCAAATTCACTGTCAAGTTATGAAGTGGGGTTTTCTATTTGGTAGTGAAATGGACCAAGCAACATTTGCCAGTGTTCTTCGAGCATGTGCTG
GATTGTCTTCTTTAGAAAACAGTCAAGAGATTCATTCCCTTATCCTCCATACTGGCTTTAACATGGATGAAATAACCTGTAGTGCTCTTATAGACATGTATGCAAAATGT
GGCGATGTTAAAAGCTCCGTTCAGGTTTTTCATGAAATGGGAAGTAAAAACAGTGTCGTTTCTTGGAACTCCATGATAGTTGGACTTGCTAAGAATGGCTATGTGGAAGA
AGCACTAGAAATATTTACTCAAATGGAGAAAGAATCCATCCTGCCTGATGATGTCACATTCCTTGGTGTTCTTTCTGCTTGTAGCCATGCTGGGCGAGTGTCCGAAGGCC
GAAAGATCTTCGACTTGATGGTTAGCCATTACAGGATACAACCAAGAATTGATCATTTGGGTTGTATGGTAGACATTCTTGGGAGGTGGGGTTTCCTTAATGAAGCAGAG
AACTTCATCAACAGACTTGGATTCGAAGCAGATCCGATGCTCTGGTTGACTTTGCTTGGCGCTTGCAGAAAACATGGAGATGAAGTTAGGGGGAGGCGTGCAGCTGAGAA
ACTTATGGAGTTGAAACCACAAAGTTCTTCACCCTATGTGTTGCTTTCTAGCATATACGTTGCATCAGAGAATTGGAAAGGAGTCACTCTTTAA
Protein sequenceShow/hide protein sequence
MNHIEEAIYLFQEMQMVGLKPTEVTFAGLLDGCDRASMLKLGRQIHCQVMKWGFLFGSEMDQATFASVLRACAGLSSLENSQEIHSLILHTGFNMDEITCSALIDMYAKC
GDVKSSVQVFHEMGSKNSVVSWNSMIVGLAKNGYVEEALEIFTQMEKESILPDDVTFLGVLSACSHAGRVSEGRKIFDLMVSHYRIQPRIDHLGCMVDILGRWGFLNEAE
NFINRLGFEADPMLWLTLLGACRKHGDEVRGRRAAEKLMELKPQSSSPYVLLSSIYVASENWKGVTL