; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:16995690..16999506
RNA-Seq ExpressionLag0038417
SyntenyLag0038417
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]2.1e-4131.87Show/hide
Query:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSN
        +Y   WLP     +I S P L  ++ V +LFT+SG W+V LL+ IF   + +AIL+IPL   +G D LIWH+E++  +SVKSGYRLA     +D+     
Subjt:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPGSSN

Query:  SERVRI---WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIGAM
        S RV +   +W  +W L +PNK +FFLWR   D LP    L  R +  +P+C  C   AE  LH  W C   K +W  S +    + +    F E+  A+
Subjt:  SERVRI---WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIGAM

Query:  RDKLTGLDFELVAY----------------------------------SSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPP---NRELKLNIDAS
        +   +G +  L AY                                   SD  +  H   GR         QS  +     WRPPP   + +    +   
Subjt:  RDKLTGLDFELVAY----------------------------------SSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPP---NRELKLNIDAS

Query:  VRPNTGEAGGGCVLR-----GA---------EG-----ELGFVDFVVETDSLR-LVKILNGELHD------VSEVGLLMDDIRRILSPWVNSKVLFTPRQ
        VR   GE    CV R     GA         EG     ++GF D ++E D+   L  I + E ++      + EV  L+++ R ++  W       TPR 
Subjt:  VRPNTGEAGGGCVLR-----GA---------EG-----ELGFVDFVVETDSLR-LVKILNGELHD------VSEVGLLMDDIRRILSPWVNSKVLFTPRQ

Query:  GNKVAHVLARLAFSYVDRV-WLEEWPSEVSDVL
        GNKVAH LA+ AF   + V W+EE PS +  VL
Subjt:  GNKVAHVLARLAFSYVDRV-WLEEWPSEVSDVL

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]8.5e-4330.48Show/hide
Query:  NQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQD
        N ++  +Y   WLP     +I S P L  ++ V +LFT+SG W+V LL+ IF   + +A L+IPL   +G D LIWH+E++  +SVKSGYRLA     +D
Subjt:  NQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQD

Query:  RPGSSNSERVRI---WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFE
        +     S RV +   +W  +W L +PNK +FFLWR   D LP    L  R +  +P+C  C   AE  LH  W C   K +W  S +    + +    F 
Subjt:  RPGSSNSERVRI---WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFE

Query:  EIIGAMRDKLTGLDFELVAY-----------------SSDYLSAFH----VGGGRCGARDSSWA----QSREREERDVWRPPPNRELKLNIDASVRPNTG
        E+  A++   +G +  L AY                 S       H    +      A + S      QS  +     WRPPP    K+N+D +V+    
Subjt:  EIIGAMRDKLTGLDFELVAY-----------------SSDYLSAFH----VGGGRCGARDSSWA----QSREREERDVWRPPPNRELKLNIDASVRPNTG

Query:  EAGGGCVLRGAEGE--------------------------------LGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQ
          G G V+R A GE                                +GF   V+E D+   +  +          GLL++++  +L  +      +TPR 
Subjt:  EAGGGCVLRGAEGE--------------------------------LGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQ

Query:  GNKVAHVLARLAFSYVDRV-WLEEWPSEVSDVL
        GNKVAH LA+ AF   + V W+EE P  +  VL
Subjt:  GNKVAHVLARLAFSYVDRV-WLEEWPSEVSDVL

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.8e-5231.54Show/hide
Query:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFT-ASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLA-HTLATQDRPGS
        IYG NW+PN+ +L+I S+P L   S VS L     GGW   ++R  F   + + IL IP+ +G+ EDRLIW++EK   +SV+SGY++A         P S
Subjt:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFT-ASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLA-HTLATQDRPGS

Query:  SNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALF---------HQSFSHFR
        S+SE VR WW+  W++++PNK + FLWRLC D LPT  NL KRG+ ++  C  C  + E+ +HLFW C   +++W+ S F            H+S S   
Subjt:  SNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALF---------HQSFSHFR

Query:  FEEI------------IGAMRDK---LTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVL
        FEE+              A  D    +  +  ELV +++ Y   F        A+ +            +W+PP     K+N DAS   +   AG G ++
Subjt:  FEEI------------IGAMRDK---LTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVL

Query:  RGAEGEL-----GFVDFVVETDSLRLVKILNG-----------ELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEE
            G++      +++ +   D    +  + G            L D+SE G ++   +   +  +++   F  R+GNK AH+LAR A    +  +W+E+
Subjt:  RGAEGEL-----GFVDFVVETDSLRLVKILNG-----------ELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEE

Query:  WPSEVSDVL
        WP E+   L
Subjt:  WPSEVSDVL

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]1.4e-4028.67Show/hide
Query:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEK--HFSVKSGYRLAHTLATQDRPGSSN
        +YG+NW+P   + +  SAP +   +TV+EL      W   L+   F   D EAI++IPL K   ED+LIWH++K  ++SVKSGY++A  +   + P  SN
Subjt:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEK--HFSVKSGYRLAHTLATQDRPGSSN

Query:  SERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFA-----------LFHQSFSHFR
         +  +  W  +W+L +P K + FLWR  HD LPT  NL K+ +   P+C  C    E   H    C   + +W  SN A           ++   F   +
Subjt:  SERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFA-----------LFHQSFSHFR

Query:  FEEIIGAMRDKLTGL----------------DFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCV
          ++ GA    L                      +VA +   + +F     +    +  +      E +  W PPPN   K+N+DA+V      AG G V
Subjt:  FEEIIGAMRDKLTGL----------------DFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCV

Query:  LRGAEG-------------------------------ELGFVDF-VVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHV
        +R ++G                               E   + F + E+DSL ++ ++N +   ++E+G L+ DI+  L  + N K   +PR  N  AH 
Subjt:  LRGAEG-------------------------------ELGFVDF-VVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHV

Query:  LARLAFSYVDRV-WLEEWPSEV
        LA+LA    + V WL+E P E+
Subjt:  LARLAFSYVDRV-WLEEWPSEV

XP_042958055.1 uncharacterized protein LOC122293570 [Carya illinoinensis]1.7e-3828.27Show/hide
Query:  IYGSNWLPNEF--SLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEK--HFSVKSGYRLAHTLATQDRPGS
        I+   WLP     S+Q Q   + S A     +   + GW   L+   FN  + EAI  IPL K    D+L+W   +   FSVK+ Y L H    +    +
Subjt:  IYGSNWLPNEF--SLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEK--HFSVKSGYRLAHTLATQDRPGS

Query:  SNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIGAMR
        S        W+ +W LNVP+  + FLW++ HD LPT+ NL K+ +  +  C +C+   E  +H+ W CP    +W      +   S     F  +   + 
Subjt:  SNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIGAMR

Query:  DKLTGLDFELVA----------YSSDYLSAFH-----VGGGRCGARDSSWAQSRERE-------ERDV--WRPPPNRELKLNIDASVRPNTGEAGGGCVL
         +L G + ELVA           S  +   F      +    CG R+   AQ  +++       +R +  W  P    +K+N DA+V       G G V+
Subjt:  DKLTGLDFELVA----------YSSDYLSAFH-----VGGGRCGARDSSWAQSRERE-------ERDV--WRPPPNRELKLNIDASVRPNTGEAGGGCVL

Query:  RGAEGEL--------------------------------GFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVL
        R +EGEL                                GF   ++E DS  +V  +N +    +E G +++D+R++L    N  V F  R+ N +AH L
Subjt:  RGAEGEL--------------------------------GFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVL

Query:  ARLAFSYVD-RVWLEEWPSEV
        A+LAF++ D RVW+EE P ++
Subjt:  ARLAFSYVD-RVWLEEWPSEV

TrEMBL top hitse value%identityAlignment
A0A2N9ESZ1 Uncharacterized protein8.8e-4630.09Show/hide
Query:  PIYGSNWLPNEFSLQIQSAP-VLSPASTVSELFTAS-GGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPG
        PI+ S WL  E   +I + P    P S+V+EL   +   WDV  +RTIF   D +AIL+IPL   S  D+LIWH  K+  ++V+SGY +         PG
Subjt:  PIYGSNWLPNEFSLQIQSAP-VLSPASTVSELFTAS-GGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPG

Query:  SSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEI---I
        SS   +    W  +W L VP K R FLWR CHD LP+K+ L++R + VSP C  C    E+CLH  W CP +  +W   +  +  Q   H  F E+   +
Subjt:  SSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEI---I

Query:  GAMRDKLTGLDFELVAY------SSDYLSAFHVGGGRCGARDSSWAQ-----------SREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGA
        G +   L    F +  +      + D L        + G R  +  Q           ++  + R +WRPP   + K+N D ++  +  + G G V+R  
Subjt:  GAMRDKLTGLDFELVAY------SSDYLSAFHVGGGRCGARDSSWAQ-----------SREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGA

Query:  EG--------------------------------ELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARL
         G                                E+G +D + E DS  +++ L+ +    +  GL+++D + +L+ +       T R GN VAH LAR 
Subjt:  EG--------------------------------ELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARL

Query:  AFSYVD-RVWLEEWPSEVSDVL
        A    D  VW+E+ P ++  +L
Subjt:  AFSYVD-RVWLEEWPSEVSDVL

A0A2N9FT78 RNase H domain-containing protein4.1e-4329.68Show/hide
Query:  PIYGSNWLPNEFSLQIQS-APVLSPASTVSELFTAS-GGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPG
        PI  S WLP E   ++ S  P     + V++L   S   WD   +R  F   D +AIL+IPL   S  D+LIWH  K+  FSV+SGY L         PG
Subjt:  PIYGSNWLPNEFSLQIQS-APVLSPASTVSELFTAS-GGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQDRPG

Query:  SSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEI---I
        SS    +   W  +W + VP K R F+WR CH+ LPTK+ L++R +  SP C  C    E+CLH  W+CP++ + W   +     Q  +H  F E+   +
Subjt:  SSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEI---I

Query:  GAMRDKLTGLDFELVA---YSSDYLSAFHV-GGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEG-----------
        G +   L   +F ++    +     +  H+   G   A++ S    +       WRPP + + K+N D ++       G G V+R   G           
Subjt:  GAMRDKLTGLDFELVA---YSSDYLSAFHV-GGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEG-----------

Query:  ---------------------ELGFVDFVVETDSLRLVKILNGE--LHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWL
                             E+G +D   E DS  +++ L+ +  +H+ S  GL+++D + +L  +       T R GN VAH LAR A    +  VW+
Subjt:  ---------------------ELGFVDFVVETDSLRLVKILNGE--LHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWL

Query:  EEWPSEVSDVL
        E+ P ++  +L
Subjt:  EEWPSEVSDVL

A0A5E4FZN9 PREDICTED: retrotransposon4.1e-4330.48Show/hide
Query:  NQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQD
        N ++  +Y   WLP     +I S P L  ++ V +LFT+SG W+V LL+ IF   + +A L+IPL   +G D LIWH+E++  +SVKSGYRLA     +D
Subjt:  NQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLAHTLATQD

Query:  RPGSSNSERVRI---WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFE
        +     S RV +   +W  +W L +PNK +FFLWR   D LP    L  R +  +P+C  C   AE  LH  W C   K +W  S +    + +    F 
Subjt:  RPGSSNSERVRI---WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFE

Query:  EIIGAMRDKLTGLDFELVAY-----------------SSDYLSAFH----VGGGRCGARDSSWA----QSREREERDVWRPPPNRELKLNIDASVRPNTG
        E+  A++   +G +  L AY                 S       H    +      A + S      QS  +     WRPPP    K+N+D +V+    
Subjt:  EIIGAMRDKLTGLDFELVAY-----------------SSDYLSAFH----VGGGRCGARDSSWA----QSREREERDVWRPPPNRELKLNIDASVRPNTG

Query:  EAGGGCVLRGAEGE--------------------------------LGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQ
          G G V+R A GE                                +GF   V+E D+   +  +          GLL++++  +L  +      +TPR 
Subjt:  EAGGGCVLRGAEGE--------------------------------LGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQ

Query:  GNKVAHVLARLAFSYVDRV-WLEEWPSEVSDVL
        GNKVAH LA+ AF   + V W+EE P  +  VL
Subjt:  GNKVAHVLARLAFSYVDRV-WLEEWPSEVSDVL

A0A6J1DAR4 uncharacterized protein LOC1110189542.8e-5231.54Show/hide
Query:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFT-ASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLA-HTLATQDRPGS
        IYG NW+PN+ +L+I S+P L   S VS L     GGW   ++R  F   + + IL IP+ +G+ EDRLIW++EK   +SV+SGY++A         P S
Subjt:  IYGSNWLPNEFSLQIQSAPVLSPASTVSELFT-ASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLA-HTLATQDRPGS

Query:  SNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALF---------HQSFSHFR
        S+SE VR WW+  W++++PNK + FLWRLC D LPT  NL KRG+ ++  C  C  + E+ +HLFW C   +++W+ S F            H+S S   
Subjt:  SNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALF---------HQSFSHFR

Query:  FEEI------------IGAMRDK---LTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVL
        FEE+              A  D    +  +  ELV +++ Y   F        A+ +            +W+PP     K+N DAS   +   AG G ++
Subjt:  FEEI------------IGAMRDK---LTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVL

Query:  RGAEGEL-----GFVDFVVETDSLRLVKILNG-----------ELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEE
            G++      +++ +   D    +  + G            L D+SE G ++   +   +  +++   F  R+GNK AH+LAR A    +  +W+E+
Subjt:  RGAEGEL-----GFVDFVVETDSLRLVKILNG-----------ELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVD-RVWLEE

Query:  WPSEVSDVL
        WP E+   L
Subjt:  WPSEVSDVL

M5VU98 Reverse transcriptase domain-containing protein3.5e-4229.46Show/hide
Query:  IYGSNWLPNEFSLQIQSAPVLSPAST-VSELFTASGG--WDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLA--HTLATQDR
        I+G  W+P   +  + ++P+    +T VSEL    G   WD+  L  +F   D   I+RIPL   +  DR++W+++KH  F+VKS YR+A   T   +D 
Subjt:  IYGSNWLPNEFSLQIQSAPVLSPAST-VSELFTASGG--WDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKH--FSVKSGYRLA--HTLATQDR

Query:  PGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIG
          SSNS+   + W  +W   VP K + F WR+ HD LPTK NL+K+G+ +  +C+ C D  E  LH+   CP   + W   N +L  +           G
Subjt:  PGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIG

Query:  AMRDKLTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEG----------------
          R        E+V ++  Y+  F        A D+    +    +   W  PP+  LK N D +  P +G    G V R A+G                
Subjt:  AMRDKLTGLDFELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEG----------------

Query:  ----------------ELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVDR-VWLEEWPSEV
                         LG    + E DS  +V  +     D S +G +++D++ +   + +S   FTPR+ N VAH LAR     VD  +W E  P  +
Subjt:  ----------------ELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWVNSKVLFTPRQGNKVAHVLARLAFSYVDR-VWLEEWPSEV

Query:  SDVL
         D L
Subjt:  SDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.0e-0732.84Show/hide
Query:  WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMW
        W+  +W  N   KH F  W +  + L T+  L   GL++  +C+LC+   E   HLF+ CP   ++W
Subjt:  WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMW

AT2G02650.1 Ribonuclease H-like superfamily protein2.6e-1022.4Show/hide
Query:  VKSGYRLA------HTLATQDRPGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMW
        ++SGY +A         A Q  PGS+  ++       +W+L+V  K + FLWR     L T   L  R +   P+C  C  + E   H+ + CP  +S+W
Subjt:  VKSGYRLA------HTLATQDRPGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMW

Query:  LGSNFALFHQSFSHFRFEEIIGAM-----RDKLTGLD-------------------FELVAYSSDYLSAFHVGGGRCGARDSS-WAQSRE----------
          +N  + +Q      FE+ +  +           LD                   F+    S DY         R G +D++ W  + E          
Subjt:  LGSNFALFHQSFSHFRFEEIIGAM-----RDKLTGLD-------------------FELVAYSSDYLSAFHVGGGRCGARDSS-WAQSRE----------

Query:  -------REERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEGEL
               R +   W PPP   +K N D+     +     G  +R   G +
Subjt:  -------REERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEGEL

AT3G25270.1 Ribonuclease H-like superfamily protein1.5e-0533.33Show/hide
Query:  LWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGS
        +W+L    K + FLW+L    L T  NL +R +   P C  C  + E   HLF+ C   + +W  S
Subjt:  LWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGS

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.0e-0631.15Show/hide
Query:  WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCP
        W  D+W L +  K +  +W+  ++ LP    LL R +++ P C  C  D E   H+ + CP
Subjt:  WWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCP

AT4G29090.1 Ribonuclease H-like superfamily protein2.9e-1723.19Show/hide
Query:  IYGSNWL---PNEFSLQIQSAPVLSPAST-----VSELFTASG-GWDVALLRTIFNGADCEAILRIPLRKGSGE--DRLIWHFEK--HFSVKSGY-RLAH
        I+   WL   P   +L++Q  P    AS      VS+L   SG  W   ++  +F   + E  L   LR G     D   W +     ++VKSGY  L  
Subjt:  IYGSNWL---PNEFSLQIQSAPVLSPAST-----VSELFTASG-GWDVALLRTIFNGADCEAILRIPLRKGSGE--DRLIWHFEK--HFSVKSGY-RLAH

Query:  TLATQDRPGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMW--------LGSNFA-
         +  +  P   +   +   +  +W+     K + FLW+   + LP    L  R L+    C+ C    E   HL + C   +  W        LG  +A 
Subjt:  TLATQDRPGSSNSERVRIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMW--------LGSNFA-

Query:  --------LFHQSFSHFRFEEI----------IGAMRDKLT--GLDF---ELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLN
                +F+    + ++E+           +   R++L   G +F   E++  + D L  + +   R  A          R     WRPPP++ +K N
Subjt:  --------LFHQSFSHFRFEEI----------IGAMRDKLT--GLDF---ELVAYSSDYLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLN

Query:  IDASVRPNTGEAGGGCVLRGAEGELGFVD--------------------------------FVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWV
         DA+   +    G G VLR  +GE+ ++                                  + E+DS  L++ILN +      +   + D++R+LS + 
Subjt:  IDASVRPNTGEAGGGCVLRGAEGELGFVD--------------------------------FVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWV

Query:  NSKVLFTPRQGNKVAHVLARLAFSYVD
          K +F PR+GN +A  +AR + S+++
Subjt:  NSKVLFTPRQGNKVAHVLARLAFSYVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCAGTTGGCCACGCCCATCTATGGCTCGAACTGGCTGCCGAATGAGTTCTCGCTTCAAATACAGTCGGCTCCAGTGCTTTCTCCTGCTAGTACGGTGAGTGA
GTTGTTCACTGCGTCTGGTGGATGGGATGTGGCTTTACTCAGGACGATTTTCAATGGGGCTGATTGTGAGGCTATTTTGAGAATTCCTCTGCGAAAGGGCTCGGGGGAGG
ATCGCTTAATCTGGCACTTTGAGAAGCATTTTTCAGTGAAGAGTGGGTATCGACTTGCTCATACATTGGCTACTCAAGACCGACCTGGTTCCTCGAACTCCGAGAGAGTG
CGCATATGGTGGTCCGACCTCTGGAGGTTGAATGTGCCCAATAAGCATAGGTTCTTCCTCTGGCGTCTGTGCCACGACTGCTTGCCAACTAAGGTAAACCTTCTCAAACG
TGGACTCACTGTATCCCCTTTGTGTGTTTTGTGTGATGATGATGCAGAAGAATGTCTCCATCTATTCTGGACATGCCCTGTGGTTAAGAGTATGTGGTTGGGCTCCAATT
TTGCCCTCTTCCACCAATCCTTTTCCCATTTCAGGTTCGAGGAAATCATTGGGGCGATGAGGGACAAACTGACAGGGCTGGATTTTGAGCTTGTGGCATATTCGAGTGAT
TACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCGGGAAGAGCGCGATGTATGGAGACCGCCCCCTAATAG
GGAGCTGAAACTTAATATCGATGCTTCGGTACGGCCGAATACAGGGGAAGCGGGGGGTGGCTGTGTGCTGCGAGGGGCTGAGGGTGAGTTGGGGTTTGTGGATTTTGTGG
TGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGTTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTC
AACAGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGTGA
GGTCTCGGACGTCCTGAGGGGTCTAGGCTTGCTTTATAGGTCTCCCCAAGTTTGTTGTCACCTCGATAGGATATGGGGTTTAGCCAGAGAGTCTATTTGCGTTTCAGATT
ATGGTTGTTCGCATGAGGCACAAAATAAGGGTGCGAAAGCTAGTACCCTGCCTCTGAGTGGAAAGAAAATGGATTTAGCTTTCGCCATGCAAGGTGTTATCTATGAGGGT
TCCCAATTCCAGAGCCCTTCAGGGCAAACTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAAGTTTATTTGTGCACGCTTTGCG
AGGAGGATCTTATGTGTGTATGATTGCTTTCGCTAGAATGCCAACTCCTATGGTTTCTTGTTGGGAAGCTCAAGGTAGATGGACCAGTGCCCATGATTGGTGGTCTTTTG
ATTTGAGTGCAAGCCAGTCTGAAAGCCAGGGGCTAGGTTGGAAGGAAGTTCATTGTACTCTGGCGGCTAGCTACATTGGGGGAATCCAATCTGATTGTTTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATCAGTTGGCCACGCCCATCTATGGCTCGAACTGGCTGCCGAATGAGTTCTCGCTTCAAATACAGTCGGCTCCAGTGCTTTCTCCTGCTAGTACGGTGAGTGA
GTTGTTCACTGCGTCTGGTGGATGGGATGTGGCTTTACTCAGGACGATTTTCAATGGGGCTGATTGTGAGGCTATTTTGAGAATTCCTCTGCGAAAGGGCTCGGGGGAGG
ATCGCTTAATCTGGCACTTTGAGAAGCATTTTTCAGTGAAGAGTGGGTATCGACTTGCTCATACATTGGCTACTCAAGACCGACCTGGTTCCTCGAACTCCGAGAGAGTG
CGCATATGGTGGTCCGACCTCTGGAGGTTGAATGTGCCCAATAAGCATAGGTTCTTCCTCTGGCGTCTGTGCCACGACTGCTTGCCAACTAAGGTAAACCTTCTCAAACG
TGGACTCACTGTATCCCCTTTGTGTGTTTTGTGTGATGATGATGCAGAAGAATGTCTCCATCTATTCTGGACATGCCCTGTGGTTAAGAGTATGTGGTTGGGCTCCAATT
TTGCCCTCTTCCACCAATCCTTTTCCCATTTCAGGTTCGAGGAAATCATTGGGGCGATGAGGGACAAACTGACAGGGCTGGATTTTGAGCTTGTGGCATATTCGAGTGAT
TACCTCAGTGCCTTCCATGTTGGTGGGGGACGTTGCGGGGCAAGGGACTCCTCATGGGCTCAATCGAGAGAGCGGGAAGAGCGCGATGTATGGAGACCGCCCCCTAATAG
GGAGCTGAAACTTAATATCGATGCTTCGGTACGGCCGAATACAGGGGAAGCGGGGGGTGGCTGTGTGCTGCGAGGGGCTGAGGGTGAGTTGGGGTTTGTGGATTTTGTGG
TGGAGACTGACTCTCTAAGACTGGTCAAAATTCTGAATGGGGAGTTGCATGATGTGTCGGAAGTGGGGCTGCTGATGGATGACATTCGAAGGATCCTCAGTCCTTGGGTC
AACAGTAAGGTGTTGTTTACTCCACGTCAGGGGAACAAGGTTGCGCATGTTCTGGCCCGCCTGGCCTTTTCATACGTTGATCGTGTATGGCTTGAGGAGTGGCCTAGTGA
GGTCTCGGACGTCCTGAGGGGTCTAGGCTTGCTTTATAGGTCTCCCCAAGTTTGTTGTCACCTCGATAGGATATGGGGTTTAGCCAGAGAGTCTATTTGCGTTTCAGATT
ATGGTTGTTCGCATGAGGCACAAAATAAGGGTGCGAAAGCTAGTACCCTGCCTCTGAGTGGAAAGAAAATGGATTTAGCTTTCGCCATGCAAGGTGTTATCTATGAGGGT
TCCCAATTCCAGAGCCCTTCAGGGCAAACTTTCGCCATGCAAGGTGTTATCTATGAGGGTTCCCAATTCCAGAGCCCTTCAGGGCAAAGTTTATTTGTGCACGCTTTGCG
AGGAGGATCTTATGTGTGTATGATTGCTTTCGCTAGAATGCCAACTCCTATGGTTTCTTGTTGGGAAGCTCAAGGTAGATGGACCAGTGCCCATGATTGGTGGTCTTTTG
ATTTGAGTGCAAGCCAGTCTGAAAGCCAGGGGCTAGGTTGGAAGGAAGTTCATTGTACTCTGGCGGCTAGCTACATTGGGGGAATCCAATCTGATTGTTTTGCTTAG
Protein sequenceShow/hide protein sequence
MENQLATPIYGSNWLPNEFSLQIQSAPVLSPASTVSELFTASGGWDVALLRTIFNGADCEAILRIPLRKGSGEDRLIWHFEKHFSVKSGYRLAHTLATQDRPGSSNSERV
RIWWSDLWRLNVPNKHRFFLWRLCHDCLPTKVNLLKRGLTVSPLCVLCDDDAEECLHLFWTCPVVKSMWLGSNFALFHQSFSHFRFEEIIGAMRDKLTGLDFELVAYSSD
YLSAFHVGGGRCGARDSSWAQSREREERDVWRPPPNRELKLNIDASVRPNTGEAGGGCVLRGAEGELGFVDFVVETDSLRLVKILNGELHDVSEVGLLMDDIRRILSPWV
NSKVLFTPRQGNKVAHVLARLAFSYVDRVWLEEWPSEVSDVLRGLGLLYRSPQVCCHLDRIWGLARESICVSDYGCSHEAQNKGAKASTLPLSGKKMDLAFAMQGVIYEG
SQFQSPSGQTFAMQGVIYEGSQFQSPSGQSLFVHALRGGSYVCMIAFARMPTPMVSCWEAQGRWTSAHDWWSFDLSASQSESQGLGWKEVHCTLAASYIGGIQSDCFA