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Lag0038439 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038439
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:17513483..17513923
RNA-Seq ExpressionLag0038439
SyntenyLag0038439
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.3e-1434.04Show/hide
Query:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDC-WRKHVGKLFFP
        +++QL   + EVAIEGA W++S     T     LK  A  W  F+  R +P+TH  TV++DRV+L ++IL  +S+++ +I   EI  C   +  G L+FP
Subjt:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDC-WRKHVGKLFFP

Query:  NTITLLCRRAGVPESEDDVTLMDKGITDVQFANRKCTGQVI
        + IT L  +A VP  +D+  + + G       +R   G+ +
Subjt:  NTITLLCRRAGVPESEDDVTLMDKGITDVQFANRKCTGQVI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.2e-1439.84Show/hide
Query:  LNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITL
        L   +  VA+ GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR++L  ++L   SI+VG++  SEI  C  +  G LFFP+ IT 
Subjt:  LNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITL

Query:  LCRRAGVPESEDDVTLMDKGITD
        LCR A  P   ++  L + G  D
Subjt:  LCRRAGVPESEDDVTLMDKGITD

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.3e-1439.37Show/hide
Query:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPN
        +   L   +  VA  GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR++L  ++L   SI+VG++  SEI  C  +  G LFFP+
Subjt:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPN

Query:  TITLLCRRAGVPESEDDVTLMDKGITD
         IT LCR A  P   ++  L + G  D
Subjt:  TITLLCRRAGVPESEDDVTLMDKGITD

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.1e-1338.17Show/hide
Query:  VVAPSNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKL
        V A +  +L   +  VAI GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RV+L +++L   SI+VG+I   EI     +  G L
Subjt:  VVAPSNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKL

Query:  FFPNTITLLCRRAGVPESEDDVTLMDKGITD
        FFP+ IT +C  A  P   ++  L + G  D
Subjt:  FFPNTITLLCRRAGVPESEDDVTLMDKGITD

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.3e-1437.72Show/hide
Query:  REVAIEGAQWRL-SKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITLLCRR
        RE+   G +W   S    RT++A+ LK  AN W+ FI+  L PTTH++++S ++++L + ++   +I+VGK+    I  C ++  GKLFFP+ I  L  +
Subjt:  REVAIEGAQWRL-SKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITLLCRR

Query:  AGVPESEDDVTLMD
        AGVPE  DD+ + +
Subjt:  AGVPESEDDVTLMD

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-1439.84Show/hide
Query:  LNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITL
        L   +  VA+ GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR++L  ++L   SI+VG++  SEI  C  +  G LFFP+ IT 
Subjt:  LNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITL

Query:  LCRRAGVPESEDDVTLMDKGITD
        LCR A  P   ++  L + G  D
Subjt:  LCRRAGVPESEDDVTLMDKGITD

A0A2P5BCG4 Uncharacterized protein (Fragment)6.2e-1539.37Show/hide
Query:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPN
        +   L   +  VA  GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR++L  ++L   SI+VG++  SEI  C  +  G LFFP+
Subjt:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPN

Query:  TITLLCRRAGVPESEDDVTLMDKGITD
         IT LCR A  P   ++  L + G  D
Subjt:  TITLLCRRAGVPESEDDVTLMDKGITD

A0A2P5CPE8 Uncharacterized protein5.3e-1438.17Show/hide
Query:  VVAPSNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKL
        V A +  +L   +  VAI GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RV+L +++L   SI+VG+I   EI     +  G L
Subjt:  VVAPSNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKL

Query:  FFPNTITLLCRRAGVPESEDDVTLMDKGITD
        FFP+ IT +C  A  P   ++  L + G  D
Subjt:  FFPNTITLLCRRAGVPESEDDVTLMDKGITD

A0A6A3AN19 Uncharacterized protein9.0e-1433.86Show/hide
Query:  NDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNT
        N+  +  +  + +   QW   +   RT     L+  A  W  F+K +LLP +H  TVS  R++L  +I+   SID+GKI   +++   ++H   L FPN 
Subjt:  NDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNT

Query:  ITLLCRRAGVPESEDDVTLMDKGITDV
        IT LCR+  VPE + D      G+TD+
Subjt:  ITLLCRRAGVPESEDDVTLMDKGITDV

W9QTD9 Uncharacterized protein6.2e-1534.04Show/hide
Query:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDC-WRKHVGKLFFP
        +++QL   + EVAIEGA W++S     T     LK  A  W  F+  R +P+TH  TV++DRV+L ++IL  +S+++ +I   EI  C   +  G L+FP
Subjt:  SNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDC-WRKHVGKLFFP

Query:  NTITLLCRRAGVPESEDDVTLMDKGITDVQFANRKCTGQVI
        + IT L  +A VP  +D+  + + G       +R   G+ +
Subjt:  NTITLLCRRAGVPESEDDVTLMDKGITDVQFANRKCTGQVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTGGCACCATCTAATGATCAATTAAATGCGGCTGTCCGAGAGGTTGCCATCGAGGGGGCTCAGTGGAGATTGTCGAAGACAGAGAAGCGCACGTTCCAGGCCGC
TTATCTGAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTGCTGCCGACAACTCACGAGGCAACGGTGTCTCGGGACCGGGTAATGCTTGCCTTTGCTA
TTCTTCGTTCAATGAGTATTGATGTGGGTAAAATAAATTCTTCTGAGATTTATGATTGCTGGCGGAAACATGTTGGGAAGTTGTTTTTCCCCAACACTATCACGTTGCTA
TGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATGTGACTTTAATGGACAAGGGAATAACTGATGTGCAATTTGCTAACCGCAAGTGTACGGGTCAAGTAATAATATA
G
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTGGCACCATCTAATGATCAATTAAATGCGGCTGTCCGAGAGGTTGCCATCGAGGGGGCTCAGTGGAGATTGTCGAAGACAGAGAAGCGCACGTTCCAGGCCGC
TTATCTGAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTGCTGCCGACAACTCACGAGGCAACGGTGTCTCGGGACCGGGTAATGCTTGCCTTTGCTA
TTCTTCGTTCAATGAGTATTGATGTGGGTAAAATAAATTCTTCTGAGATTTATGATTGCTGGCGGAAACATGTTGGGAAGTTGTTTTTCCCCAACACTATCACGTTGCTA
TGCCGAAGGGCAGGGGTGCCAGAGAGTGAGGATGATGTGACTTTAATGGACAAGGGAATAACTGATGTGCAATTTGCTAACCGCAAGTGTACGGGTCAAGTAATAATATA
G
Protein sequenceShow/hide protein sequence
MVVAPSNDQLNAAVREVAIEGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHEATVSRDRVMLAFAILRSMSIDVGKINSSEIYDCWRKHVGKLFFPNTITLL
CRRAGVPESEDDVTLMDKGITDVQFANRKCTGQVII