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Lag0038445 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038445
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:17648408..17648842
RNA-Seq ExpressionLag0038445
SyntenyLag0038445
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010682933.1 PREDICTED: uncharacterized protein LOC104897695 [Beta vulgaris subsp. vulgaris]2.2e-2742.96Show/hide
Query:  MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVI
        + DS G W  D+  ++ +ISDYF+ +FAS  P  A+FD  L  + P+V    NEVL     VDEV  A  Q+HP+K+PG++G+   FY+  WH++GDD++
Subjt:  MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVI

Query:  QCCLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLC
            +  N RV +G +N   +VLIPK   P ++ +FRPISLC
Subjt:  QCCLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLC

XP_010684019.1 PREDICTED: uncharacterized protein LOC104898622 [Beta vulgaris subsp. vulgaris]4.5e-2842.55Show/hide
Query:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC
        D  G W  D   + N+ + YF ++F S  PSD+DFD VL  + P V    N+ L RPF  DE+ +A +Q+HP K+PG +G+   FY+  WH+IGDDV   
Subjt:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC

Query:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
          N+L+  +S   +N+  + LIPKV  P + ++FRPI+LCN
Subjt:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

XP_012842345.1 PREDICTED: uncharacterized protein LOC105962578 [Erythranthe guttata]1.0e-2743.48Show/hide
Query:  GRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLN
        G W  ++  +  +I++YF+ +F S  PS+ + D VL   +PRV  + N++LS PF  DEV  A  Q+ P KSPG +GL   FY  +WH++G +VI C L 
Subjt:  GRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLN

Query:  VLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
         LNN+     +N   +VLIPKV +P +++E+RPISLCN
Subjt:  VLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

XP_023874626.1 uncharacterized protein LOC111987155 [Quercus suber]2.9e-2745.65Show/hide
Query:  GRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLN
        G W++D+  +  +I DYFST+F S  PS   FD  L A+  RV ++ N  L   F  +EV  A +Q+HP+K+PG +G+S  FY+ +W ++  DVI+C L 
Subjt:  GRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLN

Query:  VLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
        VLN+ V    IN+  + LIPKVH P +++EFRPISLCN
Subjt:  VLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

XP_030487384.1 uncharacterized protein LOC115704310 [Cannabis sativa]4.1e-2944.06Show/hide
Query:  MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVI
        ++DS G W  DK  +  ++ DY++ LF S   ++  F  VLG +QP+V    NE L   F  +EV+ A ++++P+K+PG +GL   FY+  W  + +DVI
Subjt:  MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVI

Query:  QCCLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
          CLNVLN    L  +ND +V LIPKV +P R+ EFRPISLCN
Subjt:  QCCLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

TrEMBL top hitse value%identityAlignment
A0A7N2L6Z9 Reverse transcriptase domain-containing protein5.4e-2741.84Show/hide
Query:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC
        D FGRW +D+  + N    YF  ++++  PS    D V  A+   + ++ N  LSR F  +E+++A +QIHP+KSPG +G+S  F++ +W ++G +V   
Subjt:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC

Query:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
         LNVLN  +SL  IN   +VLIPK   P R+++FRPISLCN
Subjt:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

A0A803P3X4 Uncharacterized protein8.3e-2841.96Show/hide
Query:  MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVI
        ++D  G W  DKG +  ++ DY++ LF S   ++A F+ VL  VQP+V    N+ L      ++V+ A + ++P+K+PG +GL   FY+  W  + +DVI
Subjt:  MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVI

Query:  QCCLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
          CLNVLN+   L  +ND +V LIPK+ +P R+ EFRPISLCN
Subjt:  QCCLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

A0A803P912 Uncharacterized protein2.4e-2742.55Show/hide
Query:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC
        D   RW+ +   +  +   YF  LF +   S+A+       V  ++  +TNE L+ PF  DEV+ A R IHP K+PG +G+ G FYR  W +IG++V   
Subjt:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC

Query:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
        CL +LN   S+  IND L+ LIPK+ +P ++SEFRPISLCN
Subjt:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

A0A803PRV5 Uncharacterized protein3.7e-2843.26Show/hide
Query:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC
        D + +WI +   +  +  DYF  LF S  P+    +     +  RV   TN+ L  PF  +EV  A R IHP K+PG  GL G FYR +W +IG++V   
Subjt:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC

Query:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
        CL +LN  + +  IND L+ LIPK+ +P R+SEFRPISLCN
Subjt:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

F4NCJ6 Reverse transcriptase domain-containing protein1.4e-2739.72Show/hide
Query:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC
        D  G W ++   + N+ + YFS++F S  PSD   +AV+  ++P V ++ N  L  PF  DE+++A +Q+HP K+PG +G+   FY+  WH++GDDV   
Subjt:  DSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQC

Query:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN
          N+L+   S   +N+  + LIPKV  P + +EFRPI+LCN
Subjt:  CLNVLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISLCN

SwissProt top hitse value%identityAlignment
P14381 Transposon TX1 uncharacterized 149 kDa protein7.8e-0726.47Show/hide
Query:  GRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLN
        G  ++D   + +    ++  LF S  P   D    L    P V ++  E L  P  +DE+  A R +  +KSPGL+GL+  F++  W  +G D  +    
Subjt:  GRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLN

Query:  VLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISL
                     A++ L+PK      +  +RP+SL
Subjt:  VLNNRVSLGPINDALVVLIPKVHQPNRLSEFRPISL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein4.0e-0626.92Show/hide
Query:  ISDYFSTLFASLLPSDADF---DAV--LGAVQP-RVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLNVLNNRVS
        + +     +  LL SD+D    D+V  +  + P R +D     LS      E+ +A   +  +K+PG +  +  F+   W ++ D  I            
Subjt:  ISDYFSTLFASLLPSDADF---DAV--LGAVQP-RVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLNVLNNRVS

Query:  LGPINDALVVLIPKVHQPNRLSEFRPISLC
        L   N   + LIPKV   ++LS FRP+S C
Subjt:  LGPINDALVVLIPKVHQPNRLSEFRPISLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATTCCTTTGGTAGATGGATTCAGGATAAAGGTCCACTTACTAATTTAATATCTGACTATTTCTCCACTCTTTTTGCCTCTTTGCTCCCAAGTGATGCAGATTT
CGACGCTGTACTGGGGGCTGTACAGCCTCGTGTGGATGACAAAACGAATGAGGTCTTGTCTCGACCTTTTATAGTTGATGAGGTTATTTCAGCATTCCGGCAGATTCACC
CTTCCAAATCACCGGGTCTAAATGGCTTATCAGGGGCTTTCTACAGAAGTCATTGGCATTTGATTGGGGATGATGTTATTCAGTGTTGTCTAAATGTTCTTAATAATCGG
GTTTCTCTAGGGCCTATTAATGACGCATTGGTAGTCCTCATCCCAAAAGTGCACCAGCCCAATCGATTATCTGAATTCCGTCCAATATCCTTATGTAATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATTCCTTTGGTAGATGGATTCAGGATAAAGGTCCACTTACTAATTTAATATCTGACTATTTCTCCACTCTTTTTGCCTCTTTGCTCCCAAGTGATGCAGATTT
CGACGCTGTACTGGGGGCTGTACAGCCTCGTGTGGATGACAAAACGAATGAGGTCTTGTCTCGACCTTTTATAGTTGATGAGGTTATTTCAGCATTCCGGCAGATTCACC
CTTCCAAATCACCGGGTCTAAATGGCTTATCAGGGGCTTTCTACAGAAGTCATTGGCATTTGATTGGGGATGATGTTATTCAGTGTTGTCTAAATGTTCTTAATAATCGG
GTTTCTCTAGGGCCTATTAATGACGCATTGGTAGTCCTCATCCCAAAAGTGCACCAGCCCAATCGATTATCTGAATTCCGTCCAATATCCTTATGTAATTGTTAA
Protein sequenceShow/hide protein sequence
MEDSFGRWIQDKGPLTNLISDYFSTLFASLLPSDADFDAVLGAVQPRVDDKTNEVLSRPFIVDEVISAFRQIHPSKSPGLNGLSGAFYRSHWHLIGDDVIQCCLNVLNNR
VSLGPINDALVVLIPKVHQPNRLSEFRPISLCNC