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Lag0038446 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038446
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:17648913..17649383
RNA-Seq ExpressionLag0038446
SyntenyLag0038446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EPS58553.1 hypothetical protein M569_16261, partial [Genlisea aurea]6.8e-1434.78Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMG-PESARPRGY---QNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSP-SSLVTANRRCLSSLATWEY
        +AN  W +LFP +SV HL F  SDH PILL +  P S++P      +NF K F+ +W     C+ I+RD W+    S  P +S +   + C   L  W  
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMG-PESARPRGY---QNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSP-SSLVTANRRCLSSLATWEY

Query:  KRTGHYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK
           G    KI++ + Q+   +     NE    +   +A L+ L   +EL+WKQRS+  WLK
Subjt:  KRTGHYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK

XP_023906329.1 uncharacterized protein LOC112018051 [Quercus suber]2.3e-1732.69Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPS-SLVTANRRCLSSLATWEYKRTG
        +A + W+ LFP   V HL   YSDH PI++ M P + +P+  ++ I+RF+E W+ H+ CE+I+R+ W+      SP   +   +++C   L TW     G
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPS-SLVTANRRCLSSLATWEYKRTG

Query:  HYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL
        +  T++   + ++ S ++E G  ++ K +   +  +  LL  EE++W+QRSR +WL
Subjt:  HYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]1.6e-1533.33Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPES--------ARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLA
        M N AW  +FP+ ++ HLD+++SDH  +++ M   +         RPR       RF+ +W + SEC+ I++D+WS  S S S  + +T+N +RC ++L+
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPES--------ARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLA

Query:  TWEYKRTGHYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK
         W   + G    KI+    Q+         +  S+ +   E  L  LL +EE+YWKQRSR  WL+
Subjt:  TWEYKRTGHYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK

XP_030930710.1 uncharacterized protein LOC115956488 [Quercus lobata]1.2e-1536.88Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESA-RPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTANRR---CLSSLATWEYK
        +ANL W+  FP  ++ HL    SDH P+LL    E   R RG Q+F  +F+E WL   ECE+IV + WS D   R+P+SL     +   C + L  W   
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESA-RPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTANRR---CLSSLATWEYK

Query:  RTGHYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK
        RT     +I+  +  V+   + +   ES    + A   L+ L L++E+YW QRSR  WLK
Subjt:  RTGHYGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK

XP_042983251.1 uncharacterized protein LOC122312656 [Carya illinoinensis]3.1e-1432.05Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTANRRCLSSLATWEYKRTGH
        +AN AW   FP   V H    YSDH+PI+L       + +G + F  RF+ +W +  EC Q++   W V  G      +V    RC  SL  W     G 
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTANRRCLSSLATWEYKRTGH

Query:  YGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK
           ++++A+ Q++    E  +N +   V QA   ++  L  EE+ W+QRS+ +WLK
Subjt:  YGTKIQLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK

TrEMBL top hitse value%identityAlignment
A0A2N9HRH8 Reverse transcriptase domain-containing protein2.7e-1637.97Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG
        +AN AW   F + SV H+   YSDH P+LL M   S R    +   ++F+E W  H ECE I++D WS +    SP  ++    + C  +L  W    +G
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG

Query:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL
         +  KI++  A + S I     GQN S+   ++AE N   LLL EEL+W+QRSR  WL
Subjt:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL

A0A2N9HU09 Reverse transcriptase domain-containing protein2.7e-1637.97Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG
        +AN AW   F + SV H+   YSDH P+LL M   S R    +   ++F+E W  H ECE I++D WS +    SP  ++    + C  +L  W    +G
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG

Query:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL
         +  KI++  A + S I     GQN S+   ++AE N   LLL EEL+W+QRSR  WL
Subjt:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL

A0A2N9I475 Reverse transcriptase domain-containing protein2.7e-1637.97Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG
        +AN AW   F + SV H+   YSDH P+LL M   S R    +   ++F+E W  H ECE I++D WS +    SP  ++    + C  +L  W    +G
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG

Query:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL
         +  KI++  A + S I     GQN S+   ++AE N   LLL EEL+W+QRSR  WL
Subjt:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL

A0A2N9IBV7 Reverse transcriptase domain-containing protein2.1e-1637.97Show/hide
Query:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG
        +AN AW   F + SV H+   YSDH P+LL M   S R    +   ++F+E W  H ECE I++D WS +    SP  ++    + C  +L  W    +G
Subjt:  MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTAN-RRCLSSLATWEYKRTG

Query:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL
         +  KI++  A + S I    +GQN S+   ++AE N   LLL EEL+W+QRSR  WL
Subjt:  HYGTKIQLAKAQVQSAILE--LGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWL

A0A7N2MHC9 zf-RVT domain-containing protein3.2e-1737.82Show/hide
Query:  ANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPS-SLVTANRRCLSSLATWEYKRTGH
        AN  W+SLFP   V H+   YSDH+PI++ +   +   R  +    RF+E W  H  CE +VR  W   SG  SP   L    RRC  +L  W     G+
Subjt:  ANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPS-SLVTANRRCLSSLATWEYKRTGH

Query:  YGTKIQLAKAQVQSAILELGQNESSKVVIQAEAN-LEALLLEEELYWKQRSREMWL
        + TKIQ  ++ ++   L L  N +++  I+A  N + ALL ++E+YW+QRSR +WL
Subjt:  YGTKIQLAKAQVQSAILELGQNESSKVVIQAEAN-LEALLLEEELYWKQRSREMWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATTTGGCATGGCAGTCTCTTTTTCCAGTATACTCCGTTGACCACTTGGACTTCTTCTACTCTGATCACCACCCGATTCTTCTGGTTATGGGGCCTGAG
TCGGCCAGGCCCAGAGGCTATCAAAATTTTATTAAACGTTTTGATGAACTGTGGCTCCAACATTCTGAATGTGAACAAATTGTTCGAGATAATTGGTCGGTAGAT
AGTGGCTCACGATCCCCGTCTTCTCTTGTCACAGCTAACAGACGTTGTCTTTCTTCTTTGGCCACTTGGGAATATAAGCGAACGGGGCATTATGGCACAAAAATT
CAGTTGGCCAAGGCCCAAGTCCAATCTGCGATTTTGGAACTTGGTCAAAACGAGTCCTCTAAAGTTGTTATTCAAGCAGAAGCCAATCTTGAGGCCTTATTGCTA
GAAGAAGAATTATACTGGAAACAACGTTCTCGAGAGATGTGGCTAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATTTGGCATGGCAGTCTCTTTTTCCAGTATACTCCGTTGACCACTTGGACTTCTTCTACTCTGATCACCACCCGATTCTTCTGGTTATGGGGCCTGAG
TCGGCCAGGCCCAGAGGCTATCAAAATTTTATTAAACGTTTTGATGAACTGTGGCTCCAACATTCTGAATGTGAACAAATTGTTCGAGATAATTGGTCGGTAGAT
AGTGGCTCACGATCCCCGTCTTCTCTTGTCACAGCTAACAGACGTTGTCTTTCTTCTTTGGCCACTTGGGAATATAAGCGAACGGGGCATTATGGCACAAAAATT
CAGTTGGCCAAGGCCCAAGTCCAATCTGCGATTTTGGAACTTGGTCAAAACGAGTCCTCTAAAGTTGTTATTCAAGCAGAAGCCAATCTTGAGGCCTTATTGCTA
GAAGAAGAATTATACTGGAAACAACGTTCTCGAGAGATGTGGCTAAAATAG
Protein sequenceShow/hide protein sequence
MANLAWQSLFPVYSVDHLDFFYSDHHPILLVMGPESARPRGYQNFIKRFDELWLQHSECEQIVRDNWSVDSGSRSPSSLVTANRRCLSSLATWEYKRTGHYGTKI
QLAKAQVQSAILELGQNESSKVVIQAEANLEALLLEEELYWKQRSREMWLK