; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038447 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038447
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr2:17649435..17649839
RNA-Seq ExpressionLag0038447
SyntenyLag0038447
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3478183.1 reverse transcriptase [Gossypium australe]2.7e-2746.15Show/hide
Query:  FHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSI--QWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEKDGGR
        F N   VD +GSKGGL + W   +   + +FS  HID  I  Q  D+QWR+TGFYGSP+++ R ++W LL+ L+G D  PW V GDFN +MY  EK GG 
Subjt:  FHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSI--QWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEKDGGR

Query:  YISDRELQAFHSTMNDLGLLDLGFRGSRFT
           ++ ++ F +T+ D  L DLGF G+ FT
Subjt:  YISDRELQAFHSTMNDLGLLDLGFRGSRFT

KAF5449841.1 hypothetical protein F2P56_030246 [Juglans regia]7.9e-2750.75Show/hide
Query:  KLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLD-KQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEK
        K +  F NCF VD  G  GGLS+LW   IS  ++SFS  HID  IQ  D  +WR TG YG P + +R  TW L+R L  S S PWLVGGDFN ++Y  EK
Subjt:  KLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLD-KQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEK

Query:  DGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
         GGR     +L+ F + M D  L DLGF+G RFT
Subjt:  DGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

XP_016669937.1 uncharacterized protein LOC107889912 [Gossypium hirsutum]2.3e-2643.38Show/hide
Query:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK--QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS
        ++ R  F N   VDSNGS+GGL + W + ++  L SFS  HID  I+  D+  +WR TGFYGS + + R+++W LL++LR ++ +PW V GDFN +MY  
Subjt:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK--QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS

Query:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
        EK GG    +R + AF + + D  L+D+G+ G+ FT
Subjt:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

XP_041001573.1 uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia]4.6e-2747.01Show/hide
Query:  KLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK-QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEK
        K +L F NCFS+DS G  GGLS++W++ +   L SFS  HID  I+  D  +WR TG YG+P   SR  TW L+R L   + +PWL+GG+FN +++  EK
Subjt:  KLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK-QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEK

Query:  DGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
         GGR  S  ++  F   + D  L DLGFRG RFT
Subjt:  DGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

XP_042972796.1 uncharacterized protein LOC122304603 [Carya illinoinensis]1.3e-2644.85Show/hide
Query:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLD--KQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS
        +++R+ F  CF V+S+G KGG+++LW N I   + SFS  HID  I   D   +W+ TG YG    E R +TW+LLR LR   ++PWLV GDFN ++   
Subjt:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLD--KQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS

Query:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
        EK GGR   +  +QAF S ++D  L+DLGF+G ++T
Subjt:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

TrEMBL top hitse value%identityAlignment
A0A1U8HV94 uncharacterized protein LOC1078899121.1e-2643.38Show/hide
Query:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK--QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS
        ++ R  F N   VDSNGS+GGL + W + ++  L SFS  HID  I+  D+  +WR TGFYGS + + R+++W LL++LR ++ +PW V GDFN +MY  
Subjt:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK--QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS

Query:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
        EK GG    +R + AF + + D  L+D+G+ G+ FT
Subjt:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

A0A5B6VT12 Reverse transcriptase3.2e-2647.06Show/hide
Query:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHID--GSIQWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS
        ++ RL F N   VDS+GS+GGL + W+ ++S  L SFS  HID   + Q  D QWR TGFYGSP++  R D+W LLR L  +   P LV GDFN +MY S
Subjt:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHID--GSIQWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS

Query:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
        EK  G    +R ++AF + + D  L+DLG+ G  FT
Subjt:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

A0A5B6W9Z9 Reverse transcriptase1.3e-2746.15Show/hide
Query:  FHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSI--QWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEKDGGR
        F N   VD +GSKGGL + W   +   + +FS  HID  I  Q  D+QWR+TGFYGSP+++ R ++W LL+ L+G D  PW V GDFN +MY  EK GG 
Subjt:  FHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSI--QWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEKDGGR

Query:  YISDRELQAFHSTMNDLGLLDLGFRGSRFT
           ++ ++ F +T+ D  L DLGF G+ FT
Subjt:  YISDRELQAFHSTMNDLGLLDLGFRGSRFT

A0A5B6WPQ1 Reverse transcriptase1.9e-2644.85Show/hide
Query:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK--QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS
        ++ +L F     VD++GSKGGLS+ W+      L S+SP HID  +   D   +WR+TGFYG+P    RS +W LLRHL  S+  PWLV GDFN +  + 
Subjt:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDK--QWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS

Query:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT
        EK GGR+ S+ ++  F   + D GL+DLG+RG  +T
Subjt:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRFT

A0A5B6WS07 Reverse transcriptase2.5e-2642.96Show/hide
Query:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSI--QWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS
        ++ R  F N   VD NGS+GGL + W   +S +L SFS  HID  +  Q   +QWR TGFYGSP+++ R ++W LL+ LR ++ +PWLV GDFN +MY  
Subjt:  MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSI--QWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNS

Query:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRF
        +K GG    +R ++AF + + D  L+++G+ G+ F
Subjt:  EKDGGRYISDRELQAFHSTMNDLGLLDLGFRGSRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGCGGCTGTGTTTCCATAATTGTTTCAGTGTGGATAGTAATGGCAGTAAAGGTGGTCTTTCGATTCTTTGGTCTAACCTGATCTCTTTTGTCTTGAAT
TCTTTCTCTCCCAATCACATTGATGGTTCGATTCAGTGGTTGGATAAGCAGTGGCGTATGACTGGGTTTTATGGTAGCCCATTTTCTGAATCGCGTAGTGACACA
TGGACCCTTCTTCGACACCTCAGAGGTAGTGATTCTGTTCCTTGGCTGGTGGGCGGTGATTTTAACGCCCTCATGTACAACTCTGAGAAAGATGGTGGGCGATAC
ATTTCGGACAGGGAACTTCAGGCCTTCCATTCAACTATGAATGATTTGGGGTTACTGGATTTGGGGTTCCGTGGGTCTCGCTTCACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGCGGCTGTGTTTCCATAATTGTTTCAGTGTGGATAGTAATGGCAGTAAAGGTGGTCTTTCGATTCTTTGGTCTAACCTGATCTCTTTTGTCTTGAAT
TCTTTCTCTCCCAATCACATTGATGGTTCGATTCAGTGGTTGGATAAGCAGTGGCGTATGACTGGGTTTTATGGTAGCCCATTTTCTGAATCGCGTAGTGACACA
TGGACCCTTCTTCGACACCTCAGAGGTAGTGATTCTGTTCCTTGGCTGGTGGGCGGTGATTTTAACGCCCTCATGTACAACTCTGAGAAAGATGGTGGGCGATAC
ATTTCGGACAGGGAACTTCAGGCCTTCCATTCAACTATGAATGATTTGGGGTTACTGGATTTGGGGTTCCGTGGGTCTCGCTTCACCTAG
Protein sequenceShow/hide protein sequence
MKLRLCFHNCFSVDSNGSKGGLSILWSNLISFVLNSFSPNHIDGSIQWLDKQWRMTGFYGSPFSESRSDTWTLLRHLRGSDSVPWLVGGDFNALMYNSEKDGGRY
ISDRELQAFHSTMNDLGLLDLGFRGSRFT