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Lag0038456 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038456
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransmembrane protein
Genome locationchr2:17846131..17846568
RNA-Seq ExpressionLag0038456
SyntenyLag0038456
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607234.1 hypothetical protein SDJN03_00576, partial [Cucurbita argyrosperma subsp. sororia]6.2e-3159.72Show/hide
Query:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD
        + EDLLLK   EDDE    E ED+ELM IYNLAG                        GD S KGSRNR LSDIIT I+T FFTP+      ASPL SLD
Subjt:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD

Query:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        SYKLH FNPLFES +ELEQNLN++R SPPPKFKFLRD EEKLY+
Subjt:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

XP_022948541.1 uncharacterized protein LOC111452187 [Cucurbita moschata]6.2e-3159.72Show/hide
Query:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD
        + EDLLLK   EDDE    E ED+ELM IYNLAG                        GD S KGSRNR LSDIIT I+T FFTP+      ASPL SLD
Subjt:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD

Query:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        SYKLH FNPLFES +ELEQNLN++R SPPPKFKFLRD EEKLY+
Subjt:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

XP_022997949.1 uncharacterized protein LOC111492746 [Cucurbita maxima]1.1e-3059.72Show/hide
Query:  ASEDLLLKMVKED---DEDEVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD
        + EDLLLK   ED   DE E ED+ELM IYNLAG                        GD S KGSRNR LSDIIT I+T FFTP+      ASPL SLD
Subjt:  ASEDLLLKMVKED---DEDEVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD

Query:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        SYKLH FNPLFES A+LEQNLN++R SPPPKFKFLRD EEKLY+
Subjt:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

XP_023523159.1 uncharacterized protein LOC111787432 [Cucurbita pepo subsp. pepo]2.8e-3160.42Show/hide
Query:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD
        + EDLLLK   EDDE    E ED+ELM IYNLAG                        GD S KGSRNR LSDIIT I+T FFTP+      ASPL SLD
Subjt:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD

Query:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        SYKLH FNPLFES AELEQNLN++R SPPPKFKFLRD EEKLY+
Subjt:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

XP_038893882.1 uncharacterized protein LOC120082683 [Benincasa hispida]1.9e-2759.86Show/hide
Query:  ASEDLLLKMV---KEDDEDEVE-DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLDS--Y
        + ED LLK     +EDDE+E E DLEL GIYNLAG                      S KGSRNR LSDII  I T FFTPM      ASPLSSL+S  Y
Subjt:  ASEDLLLKMV---KEDDEDEVE-DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLDS--Y

Query:  KLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        KLHGFNPLFES  ELEQNL +LR SPPPKFKFLRD EEKLY+
Subjt:  KLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

TrEMBL top hitse value%identityAlignment
A0A0A0LXD2 Uncharacterized protein9.3e-2553.47Show/hide
Query:  ASEDLLLKMVKEDDEDEVE----DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDS---------
        + E  LLK    ++EDE E    DLEL GIYNLAG                      S KGSRNR LSDIIT I+T FFTPMASP     S         
Subjt:  ASEDLLLKMVKEDDEDEVE----DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDS---------

Query:  -YKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
         YK+HGFNPLFES  E+EQNL +LR SPPPKFKFLRD EEKLY+
Subjt:  -YKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

A0A1S3C577 uncharacterized protein LOC1034971681.6e-2453.47Show/hide
Query:  ASEDLLLKMVKEDDEDEVE----DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDS---------
        + E  LLK    ++EDE E    DLEL GIYNLAG                      S KGSRNR LSDII  I+T FFTPMASP     S         
Subjt:  ASEDLLLKMVKEDDEDEVE----DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDS---------

Query:  -YKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
         YK+HGFNPLFES  ELEQNL +LR SPPPKFKFLRD EEKLY+
Subjt:  -YKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

A0A5D3DEB1 Uncharacterized protein1.6e-2453.47Show/hide
Query:  ASEDLLLKMVKEDDEDEVE----DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDS---------
        + E  LLK    ++EDE E    DLEL GIYNLAG                      S KGSRNR LSDII  I+T FFTPMASP     S         
Subjt:  ASEDLLLKMVKEDDEDEVE----DLELMGIYNLAG-------------------GDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDS---------

Query:  -YKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
         YK+HGFNPLFES  ELEQNL +LR SPPPKFKFLRD EEKLY+
Subjt:  -YKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

A0A6J1G9H1 uncharacterized protein LOC1114521873.0e-3159.72Show/hide
Query:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD
        + EDLLLK   EDDE    E ED+ELM IYNLAG                        GD S KGSRNR LSDIIT I+T FFTP+      ASPL SLD
Subjt:  ASEDLLLKMVKEDDED---EVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD

Query:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        SYKLH FNPLFES +ELEQNLN++R SPPPKFKFLRD EEKLY+
Subjt:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

A0A6J1KBC0 uncharacterized protein LOC1114927465.1e-3159.72Show/hide
Query:  ASEDLLLKMVKED---DEDEVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD
        + EDLLLK   ED   DE E ED+ELM IYNLAG                        GD S KGSRNR LSDIIT I+T FFTP+      ASPL SLD
Subjt:  ASEDLLLKMVKED---DEDEVEDLELMGIYNLAG------------------------GDISGKGSRNRILSDIITTIQTSFFTPM------ASPLSSLD

Query:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK
        SYKLH FNPLFES A+LEQNLN++R SPPPKFKFLRD EEKLY+
Subjt:  SYKLHGFNPLFESLAELEQNLNKLRYSPPPKFKFLRDVEEKLYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G59350.1 unknown protein3.9e-1557.5Show/hide
Query:  GKGSRNRILSDIITTIQTSFFTPMASPLSS---LDSYKLHGFNPLFESLAELEQN-LNKLRYSPPPKFKFLRDVEEKLYK
        G  SR R LSD+     T  FTP+ASP  S   L+SY  HGFNPLFES  ELE N   +   SPPPKFKF+RD EEKL K
Subjt:  GKGSRNRILSDIITTIQTSFFTPMASPLSS---LDSYKLHGFNPLFESLAELEQN-LNKLRYSPPPKFKFLRDVEEKLYK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGGTCAAGGAAGACGACGAAGATGAGGTAGAGGATTTGGAGCTGATGGGGATTTAC
AATCTCGCAGGAGGCGATATAAGCGGAAAAGGATCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGTCGTTCTTCACTCCCATGGCTTCTCCT
CTGAGCTCTTTAGACTCCTACAAGCTTCATGGATTCAATCCCCTCTTTGAATCATTGGCAGAATTGGAGCAAAATTTGAACAAGTTGAGATATTCTCCTCCTCCC
AAGTTCAAATTTCTCAGAGATGTAGAGGAGAAATTGTACAAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGACCTCGAGCTCGGCTGCAAGTGAAGATTTGTTGTTGAAGATGGTCAAGGAAGACGACGAAGATGAGGTAGAGGATTTGGAGCTGATGGGGATTTAC
AATCTCGCAGGAGGCGATATAAGCGGAAAAGGATCGAGAAACAGAATCTTGAGTGATATAATCACAACGATTCAAACGTCGTTCTTCACTCCCATGGCTTCTCCT
CTGAGCTCTTTAGACTCCTACAAGCTTCATGGATTCAATCCCCTCTTTGAATCATTGGCAGAATTGGAGCAAAATTTGAACAAGTTGAGATATTCTCCTCCTCCC
AAGTTCAAATTTCTCAGAGATGTAGAGGAGAAATTGTACAAAGACTAA
Protein sequenceShow/hide protein sequence
MDWTSSSAASEDLLLKMVKEDDEDEVEDLELMGIYNLAGGDISGKGSRNRILSDIITTIQTSFFTPMASPLSSLDSYKLHGFNPLFESLAELEQNLNKLRYSPPP
KFKFLRDVEEKLYKD