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Lag0038468 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038468
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr2:18227193..18231117
RNA-Seq ExpressionLag0038468
SyntenyLag0038468
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]3.9e-0735.59Show/hide
Query:  MSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNILSK--------------------------------------GRFHHS
        MS+ NL E + + LG   S D PD     G+  FI  DMKI +DKDVHWLYNI+S                                       G+F+  
Subjt:  MSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNILSK--------------------------------------GRFHHS

Query:  IDVAKLPAHFKIDVNDIF
        IDVA + A F I VND F
Subjt:  IDVAKLPAHFKIDVNDIF

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]3.0e-1534.72Show/hide
Query:  MMFGGCWNEINNYIDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------
        M  GG WN+ +NY++Y+VS++ IH+ MS+  L++ + ++LG   S D PD     G++ F+  DMKI +DKDVHWLYN++                    
Subjt:  MMFGGCWNEINNYIDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------

Query:  ------------------SKGRFHHSIDVAKLPAHFKIDVNDIF
                          S G+FH+SIDV  +  +F I+VND F
Subjt:  ------------------SKGRFHHSIDVAKLPAHFKIDVNDIF

XP_022159005.1 uncharacterized protein LOC111025451 [Momordica charantia]1.4e-0434Show/hide
Query:  SFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------------------------SKGRFHHSIDVAKLPAHFKIDVNDIF
        S D P+     G++ FI  DMKI++DKDV+WL+N+                                       S G+FHHSIDVA + A+F I+VND F
Subjt:  SFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------------------------SKGRFHHSIDVAKLPAHFKIDVNDIF

XP_038889205.1 probable polygalacturonase At1g80170 [Benincasa hispida]1.1e-0627.97Show/hide
Query:  LKSSISGGIISNFSAAPPPFVVNLKQCNNLIPIRMMFGGCWNEINNY-IDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDM
        + SS  G +++          V      + + + +++   +NE +NY IDY+V++I  H+ MSF    ++V  K+ S  +  + +     GS  FI  D+
Subjt:  LKSSISGGIISNFSAAPPPFVVNLKQCNNLIPIRMMFGGCWNEINNY-IDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDM

Query:  KIVEDKDVHWLYNILSKG
        K+ ED D+ WL+ ++S G
Subjt:  KIVEDKDVHWLYNILSKG

TrEMBL top hitse value%identityAlignment
A0A6J1C328 uncharacterized protein LOC1110069941.9e-0735.59Show/hide
Query:  MSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNILSK--------------------------------------GRFHHS
        MS+ NL E + + LG   S D PD     G+  FI  DMKI +DKDVHWLYNI+S                                       G+F+  
Subjt:  MSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNILSK--------------------------------------GRFHHS

Query:  IDVAKLPAHFKIDVNDIF
        IDVA + A F I VND F
Subjt:  IDVAKLPAHFKIDVNDIF

A0A6J1DNQ8 uncharacterized protein LOC1110223471.4e-1534.72Show/hide
Query:  MMFGGCWNEINNYIDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------
        M  GG WN+ +NY++Y+VS++ IH+ MS+  L++ + ++LG   S D PD     G++ F+  DMKI +DKDVHWLYN++                    
Subjt:  MMFGGCWNEINNYIDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------

Query:  ------------------SKGRFHHSIDVAKLPAHFKIDVNDIF
                          S G+FH+SIDV  +  +F I+VND F
Subjt:  ------------------SKGRFHHSIDVAKLPAHFKIDVNDIF

A0A6J1DXF3 uncharacterized protein LOC1110254516.7e-0534Show/hide
Query:  SFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------------------------SKGRFHHSIDVAKLPAHFKIDVNDIF
        S D P+     G++ FI  DMKI++DKDV+WL+N+                                       S G+FHHSIDVA + A+F I+VND F
Subjt:  SFDSPDFCVSFGSSHFINNDMKIVEDKDVHWLYNIL--------------------------------------SKGRFHHSIDVAKLPAHFKIDVNDIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTTTCGTCTTCTCTTGTCTTCTCCATTGTATCGTTAGGGCTTCACGCGTTAAAGAGCTCCATTAGTGGTGGGATAATCTCAAATTTCTCTGCAGCTCCACCTCC
ATTTGTAGTCAATTTGAAGCAATGTAATAATCTCATTCCTATACGGATGATGTTTGGTGGTTGTTGGAATGAGATTAATAACTATATTGATTACCAAGTTTCTCAAATTT
GTATTCATGAAGGAATGTCGTTCACTAATTTGATTGAAGTTGTAACCCAAAAGCTAGGCAGCCCATGTAGTTTTGATTCTCCCGACTTCTGTGTTTCCTTTGGATCATCA
CATTTCATTAATAACGACATGAAGATTGTGGAAGACAAGGATGTACATTGGTTGTACAACATTTTGTCTAAAGGTCGATTTCATCATTCTATTGATGTTGCAAAGTTGCC
TGCACATTTTAAGATTGATGTGAACGACATATTTTCTGAAGCGTCGCAAACACTTCCAGCATTTGAAGGATGCGACGACAACACACGACATTTGAAGGATGAGACGGGGG
GAACAGAGTGGCGTGCGGTCAGAGGATGGACGGCGAAACACAAAGGAAGTGACATCAGGAACAGAGTAGCGCGCGGTCAGAGGATGGACGACGAAACACAGAGGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTTTCGTCTTCTCTTGTCTTCTCCATTGTATCGTTAGGGCTTCACGCGTTAAAGAGCTCCATTAGTGGTGGGATAATCTCAAATTTCTCTGCAGCTCCACCTCC
ATTTGTAGTCAATTTGAAGCAATGTAATAATCTCATTCCTATACGGATGATGTTTGGTGGTTGTTGGAATGAGATTAATAACTATATTGATTACCAAGTTTCTCAAATTT
GTATTCATGAAGGAATGTCGTTCACTAATTTGATTGAAGTTGTAACCCAAAAGCTAGGCAGCCCATGTAGTTTTGATTCTCCCGACTTCTGTGTTTCCTTTGGATCATCA
CATTTCATTAATAACGACATGAAGATTGTGGAAGACAAGGATGTACATTGGTTGTACAACATTTTGTCTAAAGGTCGATTTCATCATTCTATTGATGTTGCAAAGTTGCC
TGCACATTTTAAGATTGATGTGAACGACATATTTTCTGAAGCGTCGCAAACACTTCCAGCATTTGAAGGATGCGACGACAACACACGACATTTGAAGGATGAGACGGGGG
GAACAGAGTGGCGTGCGGTCAGAGGATGGACGGCGAAACACAAAGGAAGTGACATCAGGAACAGAGTAGCGCGCGGTCAGAGGATGGACGACGAAACACAGAGGGAGTGA
Protein sequenceShow/hide protein sequence
MWVSSSLVFSIVSLGLHALKSSISGGIISNFSAAPPPFVVNLKQCNNLIPIRMMFGGCWNEINNYIDYQVSQICIHEGMSFTNLIEVVTQKLGSPCSFDSPDFCVSFGSS
HFINNDMKIVEDKDVHWLYNILSKGRFHHSIDVAKLPAHFKIDVNDIFSEASQTLPAFEGCDDNTRHLKDETGGTEWRAVRGWTAKHKGSDIRNRVARGQRMDDETQRE