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Lag0038481 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038481
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationchr2:18458825..18459177
RNA-Seq ExpressionLag0038481
SyntenyLag0038481
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147768.1 uncharacterized protein LOC111016623 [Momordica charantia]5.6e-2153.49Show/hide
Query:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGH
        + AR H ++PID YEF+V DG    RVN++++TC+C++F+ +Q PCSHAIAA + QNV+   LCSS Y++E ++ AYAEP+YPLG+
Subjt:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGH

XP_022147770.1 uncharacterized protein LOC111016625 [Momordica charantia]1.1e-1950Show/hide
Query:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW
        + AR H V+PIDR+EF+V DG     VN++++TCTC++F+ F+ PCSHAIA  +++N+S   LCS  Y++E ++  YAEPVYPLG    W
Subjt:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW

XP_038890792.1 uncharacterized protein LOC120080248 [Benincasa hispida]1.4e-2459.34Show/hide
Query:  ARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS
        A  H V+PID++EF+V DG LGGRVNIH RTCTCR+F+ ++  CSHAIAAC  +N+     CS  Y ++A+LAAYAEP+ PLGH L+WK S
Subjt:  ARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS

XP_038895917.1 uncharacterized protein LOC120084090 [Benincasa hispida]4.3e-2154.95Show/hide
Query:  ARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS
        A  H V+PID++EF++ DG L GR NIHTR CTC +F+ ++ PCSH IAAC  QN+  + LCS  Y +E+VLAAYAEP+   GH   WK S
Subjt:  ARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS

XP_038904373.1 uncharacterized protein LOC120090731 [Benincasa hispida]1.4e-2461.54Show/hide
Query:  ARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS
        A  + V+PID+YEF+V +G L GRVNIHTRTCTCR+F+ ++ PCSHAIAAC  QN+    LCS  Y ++A+LAAYAEPV  LGH L+WK S
Subjt:  ARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS

TrEMBL top hitse value%identityAlignment
A0A6J1D127 uncharacterized protein LOC1110166255.1e-2050Show/hide
Query:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW
        + AR H V+PIDR+EF+V DG     VN++++TCTC++F+ F+ PCSHAIA  +++N+S   LCS  Y++E ++  YAEPVYPLG    W
Subjt:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW

A0A6J1D278 uncharacterized protein LOC1110166232.7e-2153.49Show/hide
Query:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGH
        + AR H ++PID YEF+V DG    RVN++++TC+C++F+ +Q PCSHAIAA + QNV+   LCSS Y++E ++ AYAEP+YPLG+
Subjt:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGH

A0A6J1D4G8 uncharacterized protein LOC1110168891.1e-1950Show/hide
Query:  NARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS
        NAR HVV  ID++  QV DG+L G V+ ++RTC+CREF+ F+ PCSHAIA  + +N++   LC   Y   + + AYAEP++P+GHV  WK+S
Subjt:  NARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTS

A0A6J1DLB0 uncharacterized protein LOC1110219696.7e-2051.11Show/hide
Query:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW
        + AR H V+PIDR+EF+V DG    RVNI+++TCTC++F  ++ PCSHAIA  + +N+S   LCS  YR++ ++ AY EPVYPLG    W
Subjt:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW

A0A6J1DQV1 uncharacterized protein LOC1110222995.1e-2047.78Show/hide
Query:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW
        + AR H ++PID YE++V DG+   RVN+++++CTC++F+ +Q PCSHA+ A +++NVS   LCS  Y++E +L  YAEP+YPLG    W
Subjt:  KNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase9.3e-0633.33Show/hide
Query:  GRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW
        G V ++  TCTC EF+  + PC HA+A C    ++ L     CY VE     Y+    P+  +  W
Subjt:  GRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW

AT1G64255.1 MuDR family transposase1.6e-0532Show/hide
Query:  HVVKPIDRYEFQVDDGHLGGR--VNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYA
        ++V P+D   FQV      G   V +   +CTC +F+ ++ PC HA+A C     + L     CY +E +   YA
Subjt:  HVVKPIDRYEFQVDDGHLGGR--VNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYA

AT1G64260.1 MuDR family transposase2.9e-0729.89Show/hide
Query:  HVVKPIDRYEFQVDDGHLGGR--VNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW
        +V+  ++R  F+V +        V ++  TCTCR+F+ ++ PC HA+A      ++ L     CY VE     YA    P+  V  W
Subjt:  HVVKPIDRYEFQVDDGHLGGR--VNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAAGAATGCGAGAATGCACGTGGTTAAGCCAATTGACAGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGCGTCAACATCCACACGAGGACGTGT
ACTTGTCGTGAATTCGAATGCTTCCAACGTCCGTGCTCCCATGCAATCGCAGCCTGCATCTACCAAAATGTGTCGTACTTGGATCTCTGTTCTTCATGCTACCGT
GTTGAAGCAGTGCTAGCTGCTTACGCAGAACCCGTATATCCACTAGGTCACGTGTTGAAGTGGAAAACATCCAAAATTTTGTGGATTTCGAAGTCTTGCCACCAA
AGAGGGTTCCAAGAGTTGGTCGATGACAAACCTTGA
mRNA sequenceShow/hide mRNA sequence
GAGAAGAATGCGAGAATGCACGTGGTTAAGCCAATTGACAGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTCGCGTCAACATCCACACGAGGACGTGT
ACTTGTCGTGAATTCGAATGCTTCCAACGTCCGTGCTCCCATGCAATCGCAGCCTGCATCTACCAAAATGTGTCGTACTTGGATCTCTGTTCTTCATGCTACCGT
GTTGAAGCAGTGCTAGCTGCTTACGCAGAACCCGTATATCCACTAGGTCACGTGTTGAAGTGGAAAACATCCAAAATTTTGTGGATTTCGAAGTCTTGCCACCAA
AGAGGGTTCCAAGAGTTGGTCGATGACAAACCTTGA
Protein sequenceShow/hide protein sequence
EKNARMHVVKPIDRYEFQVDDGHLGGRVNIHTRTCTCREFECFQRPCSHAIAACIYQNVSYLDLCSSCYRVEAVLAAYAEPVYPLGHVLKWKTSKILWISKSCHQ
RGFQELVDDKP