| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 3.4e-161 | 38.67 | Show/hide |
Query: LSTAATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNP
+++AA S N + L + ++KLDR+N+ LWK+L LP++R KL+G++ G P ++I TSS+ ++ N
Subjt: LSTAATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNP
Query: LYESWIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQV
+ W DQ LLGW+ NSMT E+ATQ++ E++++LW Q L G +R++ YL+ F RKG +KM DYL MKN D L AG+PV++ L+ Q
Subjt: LYESWIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQV
Query: LLGLDEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYG
L GLD EYNPVV + +T +SW ++ A+LL FE R+E N L N + NA+ N+AN + RG+ S NN +RG+ G GRGRG+
Subjt: LLGLDEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYG
Query: QYNNNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANP
+ K CQVCG H A+ C+ RF+K TY N SA AF+ +QN +V D +WY DSGASNHVT +
Subjt: QYNNNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANP
Query: TEYEGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAES
TE+ G ++VG+G L I TG+S L +L+L ++L VP+I KNL+SVSKLA DNNI VEF ++ CFVKDK TGKV+LKG+L +GLY+
Subjt: TEYEGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAES
Query: VDVTKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHT
SG N S++V+V K WHRRLGHP+ KVLD V++ C + ++ F FC+AC+YGK H LPF +S S A +LVHT
Subjt: VDVTKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHT
Query: DLWGPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERK
D+WGPAPI +S+GF+YY GIQ R++CPYTSQQNGRAERK
Subjt: DLWGPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERK
Query: HRHVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKC
HRH+ E GLTLLAQA MPL +WW+AF T+ LIN LPSQV +SP L+ ++PD L+TFGCAC+PCLKPY +K +HT +CV+LG S HKG+KC
Subjt: HRHVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKC
Query: ISSSGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNN
++S GR+FISRHV FNED FPFH GF + TT + P S +P+ T+ + + S+P + ++P A T S NN
Subjt: ISSSGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNN
Query: HPFVPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPK---VWLTQSTTD
P SE N+ + + + + +S N +NT +H + TR K+GI KPK + LT++ D
Subjt: HPFVPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPK---VWLTQSTTD
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| GAU51268.1 hypothetical protein TSUD_412550 [Trifolium subterraneum] | 1.3e-152 | 37.78 | Show/hide |
Query: TSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESW
+S SP L I ++KLDR N+ LWK+L L ++R KL+G++ G P Q++ TS++ + +VNP + W
Subjt: TSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESW
Query: IVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLD
I DQ LLGWL NSM ++ATQ++ E++++LW Q L G +++ YL+ F +RKG +KM +YL MKN +D L AGSP+++ L+ Q L GLD
Subjt: IVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLD
Query: EEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNN
EYNPVV + + N+SW ++ A+LL FE RL+ N N + NAS N AN E F G + N RGN R RG GRG G+ +N
Subjt: EEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNN
Query: KPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEG
K CQVC GH A+ C RF++ Y+G + G+ SA +ASP D WY DSGA+NHVT + E+ G
Subjt: KPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEG
Query: NQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTK
++VG+G L I +G++ L N L+L +VL VP I KNL+SVSKL DNNI VEF + C VKDK TG+ LLKG L +GLY+
Subjt: NQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTK
Query: SASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGP
Y++V K WHR+LGHP+ KVLD V+K CN+ ++ F FC+AC++GK H LPF S S L+H+D+WGP
Subjt: SASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGP
Query: APITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVV
API S +GF+YY GIQ R++CPYTSQQNGRAERKHRHV
Subjt: APITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVV
Query: ETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSG
E GLTLLAQA MPL++WW+AF T+ LIN LPS V +SP L+F R+PD AL+ FGCAC+PCLKPY +K FHT +CV++G S HKG+KCI+S G
Subjt: ETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSG
Query: RVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPN--NHPF
R+F+SRHV FNE+ FPFHGGF + T P T +SS + + + Q P N T S T S+ +S N N
Subjt: RVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPN--NHPF
Query: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
V + F N+ +NS Q ++ + ++ + T + TH M TR K GI KPK+
Subjt: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 9.3e-151 | 41.01 | Show/hide |
Query: MTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQGRT
MT EVATQ++ E++Q++W Q L G +R+ +L+ F ++RKG LKM +YL MK AD+L AGS V++ LV+Q L GLD EYNP+V + +
Subjt: MTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQGRT
Query: NISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNNKPVCQVCGKVGHTA
+++W EM A+LL +E RLE N N + + N S N+ S + N+RG+ ++F G RG Q G RG GRG G+ ++ VCQVC K GH A
Subjt: NISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNNKPVCQVCGKVGHTA
Query: LMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGDGNNLNI
CY RFNK Y G N + S+ Q N N VASP TV D +WY DSGASNHVT D N + E +G + VG+G NL I
Subjt: LMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGDGNNLNI
Query: AYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTKSASQSRGASGVNKS
G+S L +L+L ++L VP I KNL+S+SKL DN+I+VEFHD CFVKDK TG++LL+G + +GLY+ G++ NK
Subjt: AYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTKSASQSRGASGVNKS
Query: GVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSSNGFRYY--
+V S K WHR+LGHP+ KVL+ V+K CN+ E F+FC+AC++GK+H LPF NSVS A DLVH+D+WGPAPI+S +GF+YY
Subjt: GVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSSNGFRYY--
Query: ------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGLTLLAQASMPL
GIQ+R +CPYTS QNGRAERKHRHVVE+GLTLLAQA MPL
Subjt: ------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGLTLLAQASMPL
Query: QFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFISRHVQFNEDD
+WW+AF T+ LIN LP+QV+ KSP + LF + PD A++TFGCAC+PCLKPY +K FHT KCV+LG S HKG+KC++S+GR+FISRHV FNE
Subjt: QFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFISRHVQFNEDD
Query: FPFHGGF----GAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSP-TRSLAASPNNHPFVPAFPFDNNSE
FPFH GF A+ +T TS PIS P ++ + ++N S N + +H + + ++S T + + NN + S+
Subjt: FPFHGGF----GAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSP-TRSLAASPNNHPFVPAFPFDNNSE
Query: SNSLPQASPTVEALPNPLSSSPNPSNTPE
+ P V A+ L P T E
Subjt: SNSLPQASPTVEALPNPLSSSPNPSNTPE
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 3.4e-161 | 38.17 | Show/hide |
Query: ATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYES
+++ N++ N L + + ++KLDR N+ LW+++ LPI+R +L+G++ G P ++I + + ++ + NP +E
Subjt: ATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYES
Query: WIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGL
W DQ LLGWL NSMT +ATQ++ E++ +LW Q L G +R++ YL+ F +RKG +KM DYL MKN AD L AG+P+++ L+ Q L GL
Subjt: WIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGL
Query: DEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLA-NSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYN
D EYNPVV + +T +SW ++ A+LL FE R+E N+L N + NA+ N+A S GN+ +++ G NN +RG+ G GRGRGR +
Subjt: DEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLA-NSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYN
Query: NNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEY
K CQVCG H A+ C+ RF+K TY N SA+ AF+ +QN ++ D +WY DSGASNHVT + N +E+
Subjt: NNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEY
Query: EGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDV
G +IVG+G L I TG+S L +L+L ++L VP I KNL+SVSKLA DNNI VEF ++ CFVKDK TGK +L+G+L +GLY+ + +
Subjt: EGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDV
Query: TKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLW
S+YV++ K WHR+LGHP+ KVLD V+K CN+ ++ F FC+AC+YGK H LPF S S A +LVHTD+W
Subjt: TKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLW
Query: GPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRH
GPAPI SS+GF+YY GIQ R++CPYTSQQNGRAERKHRH
Subjt: GPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRH
Query: VVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISS
+ E GLTLLAQA MPL +WW+AF T+ LIN LPS V KSP LL R+PD +L+ FGCAC+P LKPY +K FHT +CV+LG S HKG+KC++S
Subjt: VVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISS
Query: SGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPF
GR+FISRHV FNED FPFH GF ++T P T S SS P ++ +PA TR A S ++
Subjt: SGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPF
Query: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKP
+ + N A+P P +S N TH M TR K GI KP
Subjt: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKP
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 9.9e-161 | 37.93 | Show/hide |
Query: LNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVIDQLLLGWL
L ++KLDR NF LWK+L LP++R K +G++ G P Q++ + +++T ++NP Y+ W DQ LLGWL
Subjt: LNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVIDQLLLGWL
Query: YNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQ
NSMT ++ATQV+ E++++LW Q L G +R+ YL+ F + K +KM YL MKN AD L AGSP++S L+ Q L GLD EYNPVV +
Subjt: YNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQ
Query: GRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNF-YRGNQRGGGNRGRGRGRGYGQYNN-NKPVCQVCGK
+TNISW + A+LL FE RL+ N N + NAS N A+ E G N F RG RG +RG GRG + + +P+CQ+CGK
Subjt: GRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNF-YRGNQRGGGNRGRGRGRGYGQYNN-NKPVCQVCGK
Query: VGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGDG
GHTA CY RF+K Y ++ + G G+ SA VASP D WY DSGASNHVT L + E G ++VG+G
Subjt: VGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGDG
Query: NNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTKSASQSRGAS
L I +G++ L D ++L NVL VP I KNL+SVSKL DNN VEF +++C+VKDK TGK LLKG L +GLY+
Subjt: NNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTKSASQSRGAS
Query: GVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSSNGF
NK + +Y+++ K +WHR+LGHP+ KVL+ V+K N+ ++ F FC+AC++GK H LPF S S A DL+HTD+WGPAPI S + F
Subjt: GVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSSNGF
Query: RYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGLTLLAQ
+YY GIQ +++CPYTSQQNGRAERKHRHV E GLTLLAQ
Subjt: RYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGLTLLAQ
Query: ASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFISRHVQ
A MPL +WW+AF T+ LIN LPS V +SP L+F ++PD AL+ FGCAC+PCLKPY +K FHT +CV+LG S HKG+KC++S GRVF+SRHV
Subjt: ASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFISRHVQ
Query: FNEDDFPFHGGFGAADNVTTTTSSSPPIS-TWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPFVPAFPFDNNS
FNE+ FPF GF N ++ PI FP +TT++++ ++ +QQ P ++ + + F N
Subjt: FNEDDFPFHGGFGAADNVTTTTSSSPPIS-TWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPFVPAFPFDNNS
Query: ESNSLPQAS-PTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
+S A ++E + P++ + P P TH M TR KAG++KPK+
Subjt: ESNSLPQAS-PTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 1.6e-161 | 38.17 | Show/hide |
Query: ATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYES
+++ N++ N L + + ++KLDR N+ LW+++ LPI+R +L+G++ G P ++I + + ++ + NP +E
Subjt: ATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYES
Query: WIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGL
W DQ LLGWL NSMT +ATQ++ E++ +LW Q L G +R++ YL+ F +RKG +KM DYL MKN AD L AG+P+++ L+ Q L GL
Subjt: WIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGL
Query: DEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLA-NSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYN
D EYNPVV + +T +SW ++ A+LL FE R+E N+L N + NA+ N+A S GN+ +++ G NN +RG+ G GRGRGR +
Subjt: DEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLA-NSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYN
Query: NNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEY
K CQVCG H A+ C+ RF+K TY N SA+ AF+ +QN ++ D +WY DSGASNHVT + N +E+
Subjt: NNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEY
Query: EGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDV
G +IVG+G L I TG+S L +L+L ++L VP I KNL+SVSKLA DNNI VEF ++ CFVKDK TGK +L+G+L +GLY+ + +
Subjt: EGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDV
Query: TKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLW
S+YV++ K WHR+LGHP+ KVLD V+K CN+ ++ F FC+AC+YGK H LPF S S A +LVHTD+W
Subjt: TKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLW
Query: GPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRH
GPAPI SS+GF+YY GIQ R++CPYTSQQNGRAERKHRH
Subjt: GPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRH
Query: VVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISS
+ E GLTLLAQA MPL +WW+AF T+ LIN LPS V KSP LL R+PD +L+ FGCAC+P LKPY +K FHT +CV+LG S HKG+KC++S
Subjt: VVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISS
Query: SGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPF
GR+FISRHV FNED FPFH GF ++T P T S SS P ++ +PA TR A S ++
Subjt: SGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPF
Query: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKP
+ + N A+P P +S N TH M TR K GI KP
Subjt: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKP
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 4.8e-161 | 37.93 | Show/hide |
Query: LNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVIDQLLLGWL
L ++KLDR NF LWK+L LP++R K +G++ G P Q++ + +++T ++NP Y+ W DQ LLGWL
Subjt: LNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVIDQLLLGWL
Query: YNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQ
NSMT ++ATQV+ E++++LW Q L G +R+ YL+ F + K +KM YL MKN AD L AGSP++S L+ Q L GLD EYNPVV +
Subjt: YNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQ
Query: GRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNF-YRGNQRGGGNRGRGRGRGYGQYNN-NKPVCQVCGK
+TNISW + A+LL FE RL+ N N + NAS N A+ E G N F RG RG +RG GRG + + +P+CQ+CGK
Subjt: GRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNF-YRGNQRGGGNRGRGRGRGYGQYNN-NKPVCQVCGK
Query: VGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGDG
GHTA CY RF+K Y ++ + G G+ SA VASP D WY DSGASNHVT L + E G ++VG+G
Subjt: VGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGDG
Query: NNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTKSASQSRGAS
L I +G++ L D ++L NVL VP I KNL+SVSKL DNN VEF +++C+VKDK TGK LLKG L +GLY+
Subjt: NNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTKSASQSRGAS
Query: GVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSSNGF
NK + +Y+++ K +WHR+LGHP+ KVL+ V+K N+ ++ F FC+AC++GK H LPF S S A DL+HTD+WGPAPI S + F
Subjt: GVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSSNGF
Query: RYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGLTLLAQ
+YY GIQ +++CPYTSQQNGRAERKHRHV E GLTLLAQ
Subjt: RYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGLTLLAQ
Query: ASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFISRHVQ
A MPL +WW+AF T+ LIN LPS V +SP L+F ++PD AL+ FGCAC+PCLKPY +K FHT +CV+LG S HKG+KC++S GRVF+SRHV
Subjt: ASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFISRHVQ
Query: FNEDDFPFHGGFGAADNVTTTTSSSPPIS-TWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPFVPAFPFDNNS
FNE+ FPF GF N ++ PI FP +TT++++ ++ +QQ P ++ + + F N
Subjt: FNEDDFPFHGGFGAADNVTTTTSSSPPIS-TWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPFVPAFPFDNNS
Query: ESNSLPQAS-PTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
+S A ++E + P++ + P P TH M TR KAG++KPK+
Subjt: ESNSLPQAS-PTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 1.6e-161 | 38.67 | Show/hide |
Query: LSTAATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNP
+++AA S N + L + ++KLDR+N+ LWK+L LP++R KL+G++ G P ++I TSS+ ++ N
Subjt: LSTAATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNP
Query: LYESWIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQV
+ W DQ LLGW+ NSMT E+ATQ++ E++++LW Q L G +R++ YL+ F RKG +KM DYL MKN D L AG+PV++ L+ Q
Subjt: LYESWIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQV
Query: LLGLDEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYG
L GLD EYNPVV + +T +SW ++ A+LL FE R+E N L N + NA+ N+AN + RG+ S NN +RG+ G GRGRG+
Subjt: LLGLDEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYG
Query: QYNNNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANP
+ K CQVCG H A+ C+ RF+K TY N SA AF+ +QN +V D +WY DSGASNHVT +
Subjt: QYNNNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANP
Query: TEYEGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAES
TE+ G ++VG+G L I TG+S L +L+L ++L VP+I KNL+SVSKLA DNNI VEF ++ CFVKDK TGKV+LKG+L +GLY+
Subjt: TEYEGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAES
Query: VDVTKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHT
SG N S++V+V K WHRRLGHP+ KVLD V++ C + ++ F FC+AC+YGK H LPF +S S A +LVHT
Subjt: VDVTKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHT
Query: DLWGPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERK
D+WGPAPI +S+GF+YY GIQ R++CPYTSQQNGRAERK
Subjt: DLWGPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERK
Query: HRHVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKC
HRH+ E GLTLLAQA MPL +WW+AF T+ LIN LPSQV +SP L+ ++PD L+TFGCAC+PCLKPY +K +HT +CV+LG S HKG+KC
Subjt: HRHVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKC
Query: ISSSGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNN
++S GR+FISRHV FNED FPFH GF + TT + P S +P+ T+ + + S+P + ++P A T S NN
Subjt: ISSSGRVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNN
Query: HPFVPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPK---VWLTQSTTD
P SE N+ + + + + +S N +NT +H + TR K+GI KPK + LT++ D
Subjt: HPFVPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPK---VWLTQSTTD
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| A0A2Z6P4D5 Integrase catalytic domain-containing protein | 6.3e-153 | 37.78 | Show/hide |
Query: TSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESW
+S SP L I ++KLDR N+ LWK+L L ++R KL+G++ G P Q++ TS++ + +VNP + W
Subjt: TSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESW
Query: IVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLD
I DQ LLGWL NSM ++ATQ++ E++++LW Q L G +++ YL+ F +RKG +KM +YL MKN +D L AGSP+++ L+ Q L GLD
Subjt: IVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLD
Query: EEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNN
EYNPVV + + N+SW ++ A+LL FE RL+ N N + NAS N AN E F G + N RGN R RG GRG G+ +N
Subjt: EEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNN
Query: KPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEG
K CQVC GH A+ C RF++ Y+G + G+ SA +ASP D WY DSGA+NHVT + E+ G
Subjt: KPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEG
Query: NQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTK
++VG+G L I +G++ L N L+L +VL VP I KNL+SVSKL DNNI VEF + C VKDK TG+ LLKG L +GLY+
Subjt: NQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVTK
Query: SASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGP
Y++V K WHR+LGHP+ KVLD V+K CN+ ++ F FC+AC++GK H LPF S S L+H+D+WGP
Subjt: SASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGP
Query: APITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVV
API S +GF+YY GIQ R++CPYTSQQNGRAERKHRHV
Subjt: APITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVV
Query: ETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSG
E GLTLLAQA MPL++WW+AF T+ LIN LPS V +SP L+F R+PD AL+ FGCAC+PCLKPY +K FHT +CV++G S HKG+KCI+S G
Subjt: ETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSG
Query: RVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPN--NHPF
R+F+SRHV FNE+ FPFHGGF + T P T +SS + + + Q P N T S T S+ +S N N
Subjt: RVFISRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPN--NHPF
Query: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
V + F N+ +NS Q ++ + ++ + T + TH M TR K GI KPK+
Subjt: VPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKV
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| A0A803PM38 Uncharacterized protein | 3.8e-158 | 38.2 | Show/hide |
Query: LNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVIDQLLLGWL
LNQ +KLDR+NF LW+ + I+R ++L+G+L G P+P ++ L+ST +G +S QVNP +E WIV DQLLLGWL
Subjt: LNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVIDQLLLGWL
Query: YNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQ
Y SMT +A +VMG +S+ LW A++ELFG S+A+ D R Q +RKG L MADYLR + AD L AG P LVS VL GLD EY P+V +I+
Subjt: YNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEYNPVVAMIQ
Query: GRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRG---NQRGGGNRGRGRGRGYGQYNNNKPVCQVCG
R + +W ++ LL + ++E ++ S S+ V + S + N+ + G NN RG N RG NR RGRG G+ + +P CQVCG
Subjt: GRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRG---NQRGGGNRGRGRGRGYGQYNNNKPVCQVCG
Query: KVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGD
K GH+A CY R GASNH+T++ N + EY G ++V V +
Subjt: KVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYEGNQQVIVGD
Query: GNNLNIAYTG-NSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFD-QSRAESVDVTKSASQSR
GN L I + G S T + L L +L VPSI KNL+S+SKL DNN+ VEF CFVKDK+TG+V+LKG L +GLY+FD + S+ +S S
Subjt: GNNLNIAYTG-NSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFD-QSRAESVDVTKSASQSR
Query: GASGVNKSGVSVNVLSSYVNVVVSKVV--WHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPIT
SG+ S V NV N ++ + WHRRLGHPS++VLD+V+ + N+ N FCDAC+ GKSH+LPF + +A A +LVHTD+WGP+PI
Subjt: GASGVNKSGVSVNVLSSYVNVVVSKVV--WHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPIT
Query: SSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGL
S+ FRYY GI + CP+TS QNGRAERKHRH+VE GL
Subjt: SSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRHVVETGL
Query: TLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFI
TLLAQA +P ++WWDAF T+ LIN LP+ VL K+P E+LF ++PD L+ FG +CFPCL+ YQ +KF FH+ KCV LG S HKG+KC+SS+GR++I
Subjt: TLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCISSSGRVFI
Query: SRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPFVPAFPF
SR V FNED+FPF GF + T S P T + + SSS + SS + ++ H P + P + + +H
Subjt: SRHVQFNEDDFPFHGGFGAADNVTTTTSSSPPISTWFPYPVTTSSSSSPVQSSNISVPNQQLQHPIPNSPAATPPTCSLSPTRSLAASPNNHPFVPAFPF
Query: DNNSESNSLPQA-SPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKVWLTQS
D S+ A + T+E+ +P+ +S + N A THPMITR KAGIFKPK +LTQ+
Subjt: DNNSESNSLPQA-SPTVEALPNPLSSSPNPSNTPEISPTSAAPVTHPMITRGKAGIFKPKVWLTQS
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-29 | 22.27 | Show/hide |
Query: ESWIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYL-RQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVL
E W +D+ + ++ +V ++ ++A+ +W ++ L+ ++ + YL +Q++ +L V L G + +L
Subjt: ESWIVIDQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYL-RQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVL
Query: LGLDEEY-NPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGG--GNRGRGRGRG
L Y N ++ G+T I ++ + LL+ EK R+ +GQ GR ++ R + G G RG+ + R
Subjt: LGLDEEY-NPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGG--GNRGRGRGRG
Query: YGQYNNNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYG--NGNRSASQVPSTQPTA-FVTNQNVGQIVASPETVVDPNWYADSGASNHVT--AD
+ N C C + GH F ++ P +G+ T G N + +A+ V + F+ + ++ PE+ W D+ AS+H T D
Subjt: YGQYNNNKPVCQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYG--NGNRSASQVPSTQPTA-FVTNQNVGQIVASPETVVDPNWYADSGASNHVT--AD
Query: YNCLANPTEYEGNQQVIVGDGNNLNIAYTGNSCLTDGIN-ALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDT--GKVLLKGVLSEGL
C ++ V +G+ + IA G+ C+ + L L +V VP + NL+S L D + F K + T V+ KGV L
Subjt: YNCLANPTEYEGNQQVIVGDGNNLNIAYTGNSCLTDGIN-ALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDT--GKVLLKGVLSEGL
Query: YRFDQSRAESVDVTKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQ
YR + AE +A+Q +S +WH+R+GH S K L + K+ + + K CD C +GK H + F S +
Subjt: YRFDQSRAESVDVTKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQ
Query: AHAKFDLVHTDLWGPAPITSSNGFRYY----------------------------------------------------------------GIQIRLTCP
DLV++D+ GP I S G +Y+ GI+ T P
Subjt: AHAKFDLVHTDLWGPAPITSSNGFRYY----------------------------------------------------------------GIQIRLTCP
Query: YTSQQNGRAERKHRHVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVY
T Q NG AER +R +VE ++L A +P FW +A T+ LIN PS L + P + ++ + L+ FGC F + Q K + C++
Subjt: YTSQQNGRAERKHRHVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVY
Query: LGPSPLHKGHKCISS-SGRVFISRHVQFNEDD
+G G++ +V SR V F E +
Subjt: LGPSPLHKGHKCISS-SGRVFISRHVQFNEDD
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 9.1e-08 | 35.14 | Show/hide |
Query: VWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSS
+WH RL H S + ++ +VK+ L + + KFC+ C YGK+H + F+ D VH+DLWG + S
Subjt: VWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSS
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.3e-82 | 27.52 | Show/hide |
Query: NTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVI
NTS LN ++ +T KL +N+L+W + Y+L G L G PP T+ + A A +VNP Y W
Subjt: NTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVI
Query: DQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEY
D+L+ + +++ V V +A ++W +++++ S LR +Q KG + DY++ + D L G P+ V +VL L EEY
Subjt: DQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEY
Query: NPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFY--RGNQRGGGNRGRGRGRGYGQYNNNK
PV+ I + + P L +RL + +VS + + AN+ N ++ NG +NN Y R N + + N +K
Subjt: NPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFY--RGNQRGGGNRGRGRGRGYGQYNNNK
Query: PV---CQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEY
P CQ+CG GH+A C Q S V S QP + T +A NW DSGA++H+T+D+N L+ Y
Subjt: PV---CQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEY
Query: EGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDV
G V+V DG+ + I++TG++ L+ L+L N+L VP+I KNL+SV +L + N + VEF + VKD +TG LL+G + LY + + ++ V +
Subjt: EGNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDV
Query: TKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEY-FKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDL
S S S WH RLGHP+ +L+SV+ +L + F C C KS+ +PF+ S + + +++D+
Subjt: TKSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEY-FKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDL
Query: WGPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHR
W +PI S + +RYY GI + P+T + NG +ERKHR
Subjt: WGPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHR
Query: HVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCIS
H+VETGLTLL+ AS+P +W AF + LIN LP+ +L +SP + LFG P+ LR FGCAC+P L+PY +K + +CV+LG S + C+
Subjt: HVVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCIS
Query: -SSGRVFISRHVQFNEDDFPFHGGFGAADNV-----------------TTTTSSSPPISTWFPYPVTT--SSSSSPVQSSNISVPN--QQLQHPIPNSPA
+ R++ISRHV+F+E+ FPF V T T P S P+ T SS S+P ++S +S N P+SP
Subjt: -SSGRVFISRHVQFNEDDFPFHGGFGAADNV-----------------TTTTSSSPPISTWFPYPVTT--SSSSSPVQSSNISVPN--QQLQHPIPNSPA
Query: ATPPTCSLSPTRSLAASPNNHPFVPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPV-----------------------THPMI
T P + + NN + S Q + ++ SSSP+P+ + S TS P TH M
Subjt: ATPPTCSLSPTRSLAASPNNHPFVPAFPFDNNSESNSLPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPV-----------------------THPMI
Query: TRGKAGIFKP
TR KAGI KP
Subjt: TRGKAGIFKP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.0e-80 | 27.33 | Show/hide |
Query: NTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVI
NT+ LN ++ +T KL +N+L+W + Y+L G L G P PP I V +VNP Y W
Subjt: NTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQVNPLYESWIVI
Query: DQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEY
D+L+ + +++ V V +A ++W +++++ S LR I D L G P+ V +VL L ++Y
Subjt: DQLLLGWLYNSMTPEVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSLVSQVLLGLDEEY
Query: NPVVAMIQGR-TNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNNKP
PV+ I + T S +E+ L+ E +L N+ + + + N+ N RG ++N N G+R R KP
Subjt: NPVVAMIQGR-TNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGRGRGYGQYNNNKP
Query: V---CQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYE
CQ+C GH+A C P Q ++ N +S S QP A + V SP NW DSGA++H+T+D+N L+ Y
Subjt: V---CQVCGKVGHTALMCYQRFNKEYSGPSQGQNRTYGNGNRSASQVPSTQPTAFVTNQNVGQIVASPETVVDPNWYADSGASNHVTADYNCLANPTEYE
Query: GNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVT
G V++ DG+ + I +TG++ L +L L VL VP+I KNL+SV +L + N + VEF + VKD +TG LL+G + LY + + +++V +
Subjt: GNQQVIVGDGNNLNIAYTGNSCLTDGINALSLTNVLCVPSIAKNLVSVSKLAHDNNIFVEFHDSFCFVKDKDTGKVLLKGVLSEGLYRFDQSRAESVDVT
Query: KSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEY-FKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLW
S S WH RLGHPSL +L+SV+ +LP + C C KSH +PF+NS + + +++D+W
Subjt: KSASQSRGASGVNKSGVSVNVLSSYVNVVVSKVVWHRRLGHPSLKVLDSVVKQCNLPTKRNEY-FKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLW
Query: GPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRH
+PI S + +RYY GI + P+T + NG +ERKHRH
Subjt: GPAPITSSNGFRYY--------------------------------------------------------------GIQIRLTCPYTSQQNGRAERKHRH
Query: VVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCIS-
+VE GLTLL+ AS+P +W AF + LIN LP+ +L +SP + LFG+ P+ L+ FGCAC+P L+PY +K +++C ++G S + C+
Subjt: VVETGLTLLAQASMPLQFWWDAFLTSALLINVLPSQVLGGKSPVELLFGRKPDLAALRTFGCACFPCLKPYQANKFHFHTEKCVYLGPSPLHKGHKCIS-
Query: SSGRVFISRHVQFNEDDFPFH-GGFGAADNVTTTTSSSP--PISTWFPYP---------------------------VTTSSSSSPVQSSNISVPNQQLQ
+GR++ SRHVQF+E FPF FG + + + S+P P T P TT SSS + SS+IS P+
Subjt: SSGRVFISRHVQFNEDDFPFH-GGFGAADNVTTTTSSSP--PISTWFPYP---------------------------VTTSSSSSPVQSSNISVPNQQLQ
Query: HPIPNSPAATPPTCSLSPTRSLAASPN----NHPFVPAFPFDNNSESNS-LPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPV---------------
P +P+ P + P ++ ++ N N+P P P N+ NS LPQ+ + +P P +S P N+P S TS P+
Subjt: HPIPNSPAATPPTCSLSPTRSLAASPN----NHPFVPAFPFDNNSESNS-LPQASPTVEALPNPLSSSPNPSNTPEISPTSAAPV---------------
Query: ----THPMITRGKAGIFKPKVWLTQSTT
TH M TR K GI KP + +T+
Subjt: ----THPMITRGKAGIFKPKVWLTQSTT
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 2.2e-04 | 27.19 | Show/hide |
Query: GASRSTTAAQVNPLYESWIVIDQLLLGWLYNSMTP-EVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQ
G T A VN W D ++ LY ++TP + + +++++W I+ F A L + G++++ADY R MK AD+L
Subjt: GASRSTTAAQVNPLYESWIVIDQLLLGWLYNSMTP-EVATQVMGFESAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQ
Query: AGSPVTSRSLVSQVLLGLDEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQR
PVT R+LV VL GL+ +++ ++ +I+ R + A +L E+ + N ++S + E Q S G YRG R
Subjt: AGSPVTSRSLVSQVLLGLDEEYNPVVAMIQGRTNISWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQR
Query: GGGNRGRGRGRGYGQYN
G N RGRG + YN
Subjt: GGGNRGRGRGRGYGQYN
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 9.3e-08 | 22.58 | Show/hide |
Query: SALSTAATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQV
+ LS+ SF + + T+ L++ N+ +W+ L + S+ + GH+ G +STP
Subjt: SALSTAATSFNTSPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGVNPRPPQYIQPSVVESDLNSTPAEGGATSSETVASGASRSTTAAQV
Query: NPLYES-WIVIDQLLLGWLYNSMTPEVATQVMGFE-SAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSL
P+ E W D L+ W+Y ++T + ++ +A++LW +++ LF A + + +L + +Y + +K+ +D L SP++ R L
Subjt: NPLYES-WIVIDQLLLGWLYNSMTPEVATQVMGFE-SAQELWAAIQELFGVQSRAEEDYLRQIFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTSRSL
Query: VSQVLLGLDEEYNPVVAMIQGRTNI-SWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGR
V +L GL E+Y+ ++ +I+ ++ S++E + LL+ E RL N K+S+S + + S++ Q ++ +N RG + + RG
Subjt: VSQVLLGLDEEYNPVVAMIQGRTNI-SWSEMPAELLVFEKRLEMQNTLKNSVSFSQNASVNLANSREVGNQRGQQSSFNGRQNNFYRGNQRGGGNRGRGR
Query: GRGYGQYNNN
G G+YNNN
Subjt: GRGYGQYNNN
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 6.5e-09 | 35.14 | Show/hide |
Query: VWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSS
+WH RL H S + ++ +VK+ L + + KFC+ C YGK+H + F+ D VH+DLWG + S
Subjt: VWHRRLGHPSLKVLDSVVKQCNLPTKRNEYFKFCDACKYGKSHALPFANSVSQAHAKFDLVHTDLWGPAPITSS
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