| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 2.7e-90 | 35.74 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ AY ++L LS+ VLR V + T +W KL LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPET++EVKAA+KYG D +T I++ A++T++LE++ ++K+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
Query: -----------------------------------------SSEEAAVGENSIT--YSDALATSDQCSNEHPTVEKYD------------WVIDSGCSFH
S EA+ E ++T Y+ A T D C + E + W++DSGC+FH
Subjt: -----------------------------------------SSEEAAVGENSIT--YSDALATSDQCSNEHPTVEKYD------------WVIDSGCSFH
Query: MTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYV
MTP + + + +++ DGG V +G+N TC V G GSV + DG + + E + K S L GT +GLYV
Subjt: MTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYV
Query: LKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
L+ + +A + LWHKRL+H+S +GLQ L+ QG+L L FCE+C++GK+ R F K + TTKGIL+YI+SDLWGP S+ GS
Subjt: LKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
Query: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
RTDNGLEF N F+ FCK GI RH TV +TPQQNG
Subjt: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| KAA0050070.1 putative polyprotein [Cucumis melo var. makuwa] | 1.7e-81 | 38.72 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFG-IWTKLNKLYEIKDVHN
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ Y ++L LS+ VLR ++DE T G +W KL LY K + N
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFG-IWTKLNKLYEIKDVHN
Query: KMFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE-------
K++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPE ++EVKAA+KYGRD + I++ A++T++LE++ ++K+
Subjt: KMFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE-------
Query: --SSEEAAVGENSITYSDALATSDQC-----------------SNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVS
S +++ G+ + S + S +C S E T E V D S +T G+ S ++ V M ++ R++G
Subjt: --SSEEAAVGENSITYSDALATSDQC-----------------SNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVS
Query: LKLSDGWLYLWREC---WDHRDQKDSRTVLI---GTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCE
W+ C +++R K ++ L+ GT +GLYVL+ + +A + + LWH+RL+H+S +GLQ L+ QG+L L FCE
Subjt: LKLSDGWLYLWREC---WDHRDQKDSRTVLI---GTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCE
Query: YCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-----RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
+C++GK+ R F K + TTKGIL+Y++SDLWGP + G R DNGLEF N F+NFCK I RH TV +TPQQNG
Subjt: YCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-----RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.1e-91 | 35.74 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ AY ++L LS+ VLR V + T +W KL LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPET++EVKAA+KYGRD +T I++ A++T++LE++ ++K+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
Query: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
S EA+ E ++T Y+ A T D + + E + W++DSGC+FHM
Subjt: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
Query: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
TP + + + +++ DGG V +G+N TC V G GSV + DG + + E + K S L GT +GLYVL
Subjt: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
Query: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
+ + +A ++ +T+ LWHKRL+H+S +GLQ L+ QG+L L FCE+C++GK+ R F K + TTKGIL+Y++SDLWGP S+ GS
Subjt: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
Query: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
RTDNGLEF N F+ FCK GI RH TV +TPQQNG
Subjt: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.3e-100 | 42.83 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ T+FEIEKFDG GDF LW +I AILG QKAL+AL+DP +LP +T+ ++ET+ AY LI+N+++NVLRQVI+E T F W KL LYE KD+ NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKESS------
MF++E+ F++K + +K L ENLD+FK++T+ GEK+G ENEA +L+NS+ +T+KEVK LKYGR+ IT + +I+ +++K+LEL+++ K S+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKESS------
Query: ------------------------------------EEAAVGENSITYSDALATSDQCSNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYM
+ VG + Y++ LA +++ + E T E+ D V+DSGC++HMT K WF Y+ +G VYM
Subjt: ------------------------------------EEAAVGENSITYSDALATSDQCSNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYM
Query: GNNNTCRVVGIGSVSLKLSDGWLYLWRECWDHRDQKDSRTVLIGTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQG
GNN C ++G+GSV LKLS RE ++ R +L K+ GLY +KNV + AL E +LWH+RLSHIS KGL L QG++
Subjt: GNNNTCRVVGIGSVSLKLSDGWLYLWRECWDHRDQKDSRTVLIGTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQG
Query: VGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGSRT
+ L FCE+C+ GK+KR F+K + +K L+Y++ DLWGPA T+S GSRT
Subjt: VGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGSRT
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 5.4e-91 | 35.74 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ AY ++L LS+ VLR V + T +W KL LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPET++EVKAA+KYGRD +T I++ A++T++LE++ ++K+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
Query: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
S EA+ E ++T Y+ A T D + + E + W++DSGC+FHM
Subjt: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
Query: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
TP + + + +++ DGG V +G+N TC V G GSV + DG + + E + K S L GT +GLYVL
Subjt: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
Query: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
+ + +A ++ +T+ LWHKRL+H+S +GLQ L+ QG+L L FCE+C++GK+ R F K + TTKGIL+Y++SDLWGP S+ GS
Subjt: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
Query: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
RTDNGLEF N F+ FCK GI RH TV +TPQQNG
Subjt: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.3e-90 | 35.74 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ AY ++L LS+ VLR V + T +W KL LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPET++EVKAA+KYG D +T I++ A++T++LE++ ++K+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
Query: -----------------------------------------SSEEAAVGENSIT--YSDALATSDQCSNEHPTVEKYD------------WVIDSGCSFH
S EA+ E ++T Y+ A T D C + E + W++DSGC+FH
Subjt: -----------------------------------------SSEEAAVGENSIT--YSDALATSDQCSNEHPTVEKYD------------WVIDSGCSFH
Query: MTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYV
MTP + + + +++ DGG V +G+N TC V G GSV + DG + + E + K S L GT +GLYV
Subjt: MTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYV
Query: LKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
L+ + +A + LWHKRL+H+S +GLQ L+ QG+L L FCE+C++GK+ R F K + TTKGIL+YI+SDLWGP S+ GS
Subjt: LKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
Query: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
RTDNGLEF N F+ FCK GI RH TV +TPQQNG
Subjt: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| A0A5A7U459 Putative polyprotein | 8.4e-82 | 38.72 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFG-IWTKLNKLYEIKDVHN
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ Y ++L LS+ VLR ++DE T G +W KL LY K + N
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFG-IWTKLNKLYEIKDVHN
Query: KMFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE-------
K++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPE ++EVKAA+KYGRD + I++ A++T++LE++ ++K+
Subjt: KMFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE-------
Query: --SSEEAAVGENSITYSDALATSDQC-----------------SNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVS
S +++ G+ + S + S +C S E T E V D S +T G+ S ++ V M ++ R++G
Subjt: --SSEEAAVGENSITYSDALATSDQC-----------------SNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVS
Query: LKLSDGWLYLWREC---WDHRDQKDSRTVLI---GTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCE
W+ C +++R K ++ L+ GT +GLYVL+ + +A + + LWH+RL+H+S +GLQ L+ QG+L L FCE
Subjt: LKLSDGWLYLWREC---WDHRDQKDSRTVLI---GTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCE
Query: YCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-----RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
+C++GK+ R F K + TTKGIL+Y++SDLWGP + G R DNGLEF N F+NFCK I RH TV +TPQQNG
Subjt: YCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-----RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.2e-101 | 42.83 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ T+FEIEKFDG GDF LW +I AILG QKAL+AL+DP +LP +T+ ++ET+ AY LI+N+++NVLRQVI+E T F W KL LYE KD+ NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKESS------
MF++E+ F++K + +K L ENLD+FK++T+ GEK+G ENEA +L+NS+ +T+KEVK LKYGR+ IT + +I+ +++K+LEL+++ K S+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKESS------
Query: ------------------------------------EEAAVGENSITYSDALATSDQCSNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYM
+ VG + Y++ LA +++ + E T E+ D V+DSGC++HMT K WF Y+ +G VYM
Subjt: ------------------------------------EEAAVGENSITYSDALATSDQCSNEHPTVEKYDWVIDSGCSFHMTPSKGWFSTYREWDGGIVYM
Query: GNNNTCRVVGIGSVSLKLSDGWLYLWRECWDHRDQKDSRTVLIGTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQG
GNN C ++G+GSV LKLS RE ++ R +L K+ GLY +KNV + AL E +LWH+RLSHIS KGL L QG++
Subjt: GNNNTCRVVGIGSVSLKLSDGWLYLWRECWDHRDQKDSRTVLIGTKINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQG
Query: VGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGSRT
+ L FCE+C+ GK+KR F+K + +K L+Y++ DLWGPA T+S GSRT
Subjt: VGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGSRT
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| A0A5A7UB25 Putative gag-pol polyprotein | 2.0e-91 | 35.74 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ AY ++L LS+ VLR V + T +W KL LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPET++EVKAA+KYGRD +T I++ A++T++LE++ ++K+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
Query: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
S EA+ E ++T Y+ A T D + + E + W++DSGC+FHM
Subjt: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
Query: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
TP + + + +++ DGG V +G+N TC V G GSV + DG + + E + K S L GT +GLYVL
Subjt: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
Query: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
+ + +A ++ +T+ LWHKRL+H+S +GLQ L+ QG+L L FCE+C++GK+ R F K + TTKGIL+Y++SDLWGP S+ GS
Subjt: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
Query: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
RTDNGLEF N F+ FCK GI RH TV +TPQQNG
Subjt: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| A0A5D3DNU1 Putative gag-pol polyprotein | 2.6e-91 | 35.74 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
M+ TRFE+ KF+G GDF LW+ KI+AIL Q K + L D +LP +TE +K M+ AY ++L LS+ VLR V + T +W KL LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
++++E+FF YKMD SK L ENLD+F+++ + N+GEK+ DEN+A +LLNSLPET++EVKAA+KYGRD +T I++ A++T++LE++ ++K+
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDIITTDIIISAIRTKDLELQSQKKE--------
Query: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
S EA+ E ++T Y+ A T D + + E + W++DSGC+FHM
Subjt: -----------------------------------------SSEEAAVGENSIT--YSDALATS--DQCSNEHPTVE---------KYDWVIDSGCSFHM
Query: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
TP + + + +++ DGG V +G+N TC V G GSV + DG + + E + K S L GT +GLYVL
Subjt: TPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLSDGWLYLW---------------------------RECWDHRDQKDSRTVLIGTKINGLYVL
Query: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
+ + +A ++ +T+ LWHKRL+H+S +GLQ L+ QG+L L FCE+C++GK+ R F K + TTKGIL+Y++SDLWGP S+ GS
Subjt: KNVEMIQTALSVTENSLTECD-LWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATTNSLSGS-
Query: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
RTDNGLEF N F+ FCK GI RH TV +TPQQNG
Subjt: ----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-48 | 24.62 | Show/hide |
Query: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
MS ++E+ KF+G F W+ +++ +L QQ + L S+ P + E ++ A + L+LS++V+ +IDE+T GIWT+L LY K + NK
Subjt: MSMTRFEIEKFDGKGDFDLWKAKIKAILGQQKALQALQDPSQLPTIVTEEQKETMNVTAYGMLILNLSNNVLRQVIDEETPFGIWTKLNKLYEIKDVHNK
Query: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDII-----TTDIIISAIRTKDLELQSQ------
++++++ + M +L+ F + ++ N+G KI +E++A +LLNSLP ++ + + +G+ I T+ ++++ K E Q Q
Subjt: MFMRERFFTYKMDPSKPLTENLDDFKRMTSEFKNVGEKIGDENEAFVLLNSLPETFKEVKAALKYGRDII-----TTDIIISAIRTKDLELQSQ------
Query: ---------------------------------------------------------KKESSEEAAVGENSITYSDALATSDQCSNEHPTVEKYDWVIDS
+K AA+ +N+ + ++C H + + +WV+D+
Subjt: ---------------------------------------------------------KKESSEEAAVGENSITYSDALATSDQCSNEHPTVEKYDWVIDS
Query: GCSFHMTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLS----------------------------DGW-LYLWRECWDHRDQKDSRTVLIGT
S H TP + F Y D G V MGN + ++ GIG + +K + DG+ Y + W R K S + G
Subjt: GCSFHMTPSKGWFSTYREWDGGIVYMGNNNTCRVVGIGSVSLKLS----------------------------DGW-LYLWRECWDHRDQKDSRTVLIGT
Query: KINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATT
LY N E+ Q L+ ++ ++ DLWHKR+ H+S KGLQ+LA + ++ G + C+YC+ GK R SF S IL+ +YSD+ GP
Subjt: KINGLYVLKNVEMIQTALSVTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLWGPATT
Query: NSLSGS-----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
S+ G+ R+DNG E+ + F+ +C HGI +TV TPQ NG
Subjt: NSLSGS-----------------------------------------------RTDNGLEFCNESFDNFCKEHGIVRHRTVRHTPQQNG
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 9.1e-17 | 40.19 | Show/hide |
Query: KDSRTVLIGTKINGLYVLKNVEMIQTALS-VTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEY
K RT+L G + + LY+L+ ++T S + E + E LWH RL+H+S +G+++L +G L +L FCE C+ GK R +F+ Q TTK L+Y
Subjt: KDSRTVLIGTKINGLYVLKNVEMIQTALS-VTENSLTECDLWHKRLSHISTKGLQVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEY
Query: IYSDLWG
++SDLWG
Subjt: IYSDLWG
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.3e-04 | 36.36 | Show/hide |
Query: WHKRLSHISTKGL-QVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLW
WH RL H S L V++N + L C C + K+ + F+ S +T+ LEYIYSD+W
Subjt: WHKRLSHISTKGL-QVLANQGILPQGVGENLNFCEYCVVGKAKRHSFNKSQLTTKGILEYIYSDLW
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