CuGenDBv2

Gene ID	Lag0038498
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	chr2:18764052..18765581
RNA-Seq Expression	Lag0038498
Synteny	Lag0038498
Gene Ontology terms	NA
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4273082.1 unnamed protein product [Prunus armeniaca]

2.0e-74

31.8

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Query:  MKHSVKLGKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGS
        ++ S   GKYLGL+ DFG  KR  FE + K I  +  GWAEQYLS AGKE                          EI   +A FWW+ +K+ RGIHW S
Subjt:  MKHSVKLGKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGS

Query:  WEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWI
        W+ L + K  GG+  +D+  FNLA+LAK GWRIL++P+ L+AR+ +  Y+ H++F+ AV   + SWGW+ I+ G+ IL+ G RWR+G    + + +D W+
Subjt:  WEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWI

Query:  PRPS-TFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA---------------------
          PS +    R LD    +  + +D N   W  D +  C    +   +  IP+SR    D  VWH+T+   Y+VRSGYA                     
Subjt:  PRPS-TFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA---------------------

Query:  -------WQRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRG
               W+ +W            W    + + + +    RG+ V+     CG+E E+  H   +C+  R  WF SP+QLD     G  FI  WE + + 
Subjt:  -------WQRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRG

Query:  LEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFR-------DILRETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETL
         E  E+  D L     GLWR+WK RN  +F+ +  +    + C   +V EFR        ++ E         E  + W         +  DAAW+ +T 
Subjt:  LEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFR-------DILRETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETL

Query:  SMGYRWSLHGPDGTLWAEGAEG
          G  W +   DG +   G +G
Subjt:  SMGYRWSLHGPDGTLWAEGAEG

CAB4274760.1 unnamed protein product [Prunus armeniaca]

3.3e-77

32.03

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Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        GKYLG+  DFG  KR+ FE + + +D + +GWAEQ+LS AGKE                          EI   +ARFWW+   +  GIHW SW  L++ 
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K  GGL  +D+  FN+ALLAK GWRIL +P  L+A +    YF   +FL A ++  +SWGW+ I+ G+ +L+ G RWR+G  + + V  DPW+P P TF+
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW
         +        +  + +D     W++D +  C V  +   +L+IP+SR    D  +WHF     Y+VRSGY                             W
Subjt:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW

Query:  QRVW----------LSWL---SRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE
        + VW            W    + + +     RR +   G    CG ++ET  H   ECD  RAFWF SPLQLD     G  FI++W+ +   L   E+A 
Subjt:  QRVW----------LSWL---SRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE

Query:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGS-----QWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHG
        +A+ +   GLWR+WK RN  +F     D    ++   ++V EFR    +  + +    +  S      W    L    +  DAAW  + +  G  W +  
Subjt:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGS-----QWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHG

Query:  PDGTLWAEGAEG
          G L   G +G
Subjt:  PDGTLWAEGAEG

CAB4303756.1 unnamed protein product [Prunus armeniaca]

2.4e-75

31.63

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Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        GKYLG+  DFG  KR+ FE + + +D + +GWAEQ+LS AGKE                          EI   +ARFWW+   +   IHW SW  L++ 
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K VGGL  +D+  FN+ LLAK GWRIL +P  L+A +    YF   +FL A ++  +SWGW+ I+ G+ +L+ G RWR+G  + + V  DPW+P P TF+
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW
         +        +  + +D     W++D +  C V  +   +L+IP+SR    D  +WHF+    Y+VRSGY                             W
Subjt:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW

Query:  QRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE
        + VW            W    + + +     RR +   G    CG ++ET  H   ECD  RAFWF SPLQLD     G  FI++W+ +   L   E+A 
Subjt:  QRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE

Query:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYND--RRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDG
        +A+ +   GLWR+WK RN  +F     D    ++   ++V EFR   ++      +         W         +  DAAW  + +  G  W +    G
Subjt:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYND--RRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDG

Query:  TLWAEGAEG
         L   G +G
Subjt:  TLWAEGAEG

XP_028948114.1 uncharacterized protein LOC114820933 [Malus domestica]

6.5e-73

30.89

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Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        GKYLGL  DFG  K+  F  +   I+ R  GW+EQ+LS AGKE                          ++   +  +WW+   + +G+HW SW+ L + 
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTF-
        K +GGL  KDI  FNLA LAK GWRI+++P  L+A V +  YF    F EA      SWGW+ I   + +L+ G RWRVG  +KIN+  DPW P+P+TF 
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTF-

Query:  -KPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------
         KP  CL  T  +  D ++ N   W+ + + +     D   +L+IP+S+    D  VWH T    YSV++GY                            
Subjt:  -KPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------

Query:  AWQRVW----------LSWL---SRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGREN
         W+ +W            W    +   +     RR M++D     C   +E+ NH    CD +   WF SPL L+     G  F+ SW      ++ RE+
Subjt:  AWQRVW----------LSWL---SRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGREN

Query:  AEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGSQ------WVTRHLNWSTLWVDAAWIKETLSMGYRWS
        AE  +     GLWR+WK RN ++FK SH      +    + +GE+R+ +     D        S       W         L  DA+W   +   G  W 
Subjt:  AEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGSQ------WVTRHLNWSTLWVDAAWIKETLSMGYRWS

Query:  LHGPDGTLWAEGAEGVVT
        +    G L A G  G  T
Subjt:  LHGPDGTLWAEGAEGVVT

XP_028962235.1 uncharacterized protein LOC114826307 [Malus domestica]

1.2e-71

31.98

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Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        GKYLGL  DFG  K+  F  +   ++ R  GW EQ+LSQAGKE                          +I   + +FWW+  ++  GIHW SWE ++K 
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K  GGL  KDI  FNLA+LAK GWR+  +P  L+A V K  Y    +F +A      SWGW+ I   + +L +G RWRVG    IN+  DPW P+PS+F+
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  --PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------
          P   LD T  +  D +D     W+ + +       D D +L+IP+S     D  +W  + +  YSV+SGY                            
Subjt:  --PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------

Query:  AWQRVW-LSWLSRVQM------------GQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGREN
         W R+W L   S++++             +   RR M+VD     C   +ET NH    C  + +FWF SPL L++   +G  F+ SW K + GL+G+ N
Subjt:  AWQRVW-LSWLSRVQM------------GQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGREN

Query:  AEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDR--------RGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYR
        AE+       GLWR+WK RN  +FK  +      +    + + EFR+      +D                  W         +  DAAW K+TL  G  
Subjt:  AEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDR--------RGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYR

Query:  WSLHGPDGTLWAEGAEGVV
        W      G L A G  G V
Subjt:  WSLHGPDGTLWAEGAEGVV

TrEMBL top hits

e value

%identity

Alignment

A0A6J5U034 Reverse transcriptase domain-containing protein

3.1e-65

32.27

Show/hide

Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        G+YLGL  DFG  K+  FE +   I+ +  GW+EQYLSQAGKE                          EI   + R+WW+  KE +GIHW  W+ L+  
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K  GG+  +D+  FNLA+LAK GWRI+K+PD L+A  Y+  YFR ++F+ A      SWGW+ I+ G+ IL+   RWR  +    + +  P IP      
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA----------------------------W
                  L +  +DD    W  D +  C   A+   +L +P+SR    D  VWHFT    YSVR+GY                             W
Subjt:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA----------------------------W

Query:  QR-------------VWLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE
        +              VW S  + + +     RR + VD     CG E E+  H    C+  R FWFGS +QLD     G  F   W+ + +  E  +N++
Subjt:  QR-------------VWLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE

Query:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREV
        + L  +  GLWR+WK RN+ +F+ S  D    + C + +V
Subjt:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREV

A0A6J5UAY2 Reverse transcriptase domain-containing protein

9.7e-75

31.8

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Query:  MKHSVKLGKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGS
        ++ S   GKYLGL+ DFG  KR  FE + K I  +  GWAEQYLS AGKE                          EI   +A FWW+ +K+ RGIHW S
Subjt:  MKHSVKLGKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGS

Query:  WEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWI
        W+ L + K  GG+  +D+  FNLA+LAK GWRIL++P+ L+AR+ +  Y+ H++F+ AV   + SWGW+ I+ G+ IL+ G RWR+G    + + +D W+
Subjt:  WEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWI

Query:  PRPS-TFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA---------------------
          PS +    R LD    +  + +D N   W  D +  C    +   +  IP+SR    D  VWH+T+   Y+VRSGYA                     
Subjt:  PRPS-TFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA---------------------

Query:  -------WQRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRG
               W+ +W            W    + + + +    RG+ V+     CG+E E+  H   +C+  R  WF SP+QLD     G  FI  WE + + 
Subjt:  -------WQRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRG

Query:  LEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFR-------DILRETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETL
         E  E+  D L     GLWR+WK RN  +F+ +  +    + C   +V EFR        ++ E         E  + W         +  DAAW+ +T 
Subjt:  LEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFR-------DILRETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETL

Query:  SMGYRWSLHGPDGTLWAEGAEG
          G  W +   DG +   G +G
Subjt:  SMGYRWSLHGPDGTLWAEGAEG

A0A6J5UE59 Reverse transcriptase domain-containing protein

1.6e-77

32.03

Show/hide

Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        GKYLG+  DFG  KR+ FE + + +D + +GWAEQ+LS AGKE                          EI   +ARFWW+   +  GIHW SW  L++ 
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K  GGL  +D+  FN+ALLAK GWRIL +P  L+A +    YF   +FL A ++  +SWGW+ I+ G+ +L+ G RWR+G  + + V  DPW+P P TF+
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW
         +        +  + +D     W++D +  C V  +   +L+IP+SR    D  +WHF     Y+VRSGY                             W
Subjt:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW

Query:  QRVW----------LSWL---SRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE
        + VW            W    + + +     RR +   G    CG ++ET  H   ECD  RAFWF SPLQLD     G  FI++W+ +   L   E+A 
Subjt:  QRVW----------LSWL---SRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE

Query:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGS-----QWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHG
        +A+ +   GLWR+WK RN  +F     D    ++   ++V EFR    +  + +    +  S      W    L    +  DAAW  + +  G  W +  
Subjt:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGS-----QWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHG

Query:  PDGTLWAEGAEG
          G L   G +G
Subjt:  PDGTLWAEGAEG

A0A6J5WGH5 Uncharacterized protein

3.6e-69

32.66

Show/hide

Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        G+YLGL  DFG  K+  FE +   I+ +  GW+EQYLSQAGKE                          EI   + R+WW+  KE +GIHW  W+ L+  
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K  GG+  +D+  FNLA+LAK GW+I+KH D L+A  Y+  YFR ++F+        SWGW+ I+ G+ IL+ G RWR+G   ++    D W+P PS+FK
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA----------------------------W
                  L +  +DD    W  D +  C   A+   +L++P+SR    D  VWHFT    YSV +GY                             W
Subjt:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYA----------------------------W

Query:  QR-------------VWLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE
        +              VW S  + + +     RR + VD     CG E E+  H    C+  R FWFGS +QLD     G   +++    YR +      +
Subjt:  QR-------------VWLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE

Query:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFR
              G GLWR+WK RN+ +F+ S  D    + C + +V E+R
Subjt:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFR

A0A6J5WPU6 Reverse transcriptase domain-containing protein

1.1e-75

31.63

Show/hide

Query:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP
        GKYLG+  DFG  KR+ FE + + +D + +GWAEQ+LS AGKE                          EI   +ARFWW+   +   IHW SW  L++ 
Subjt:  GKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKE--------------------------EINHRLARFWWQKKKESRGIHWGSWEDLTKP

Query:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK
        K VGGL  +D+  FN+ LLAK GWRIL +P  L+A +    YF   +FL A ++  +SWGW+ I+ G+ +L+ G RWR+G  + + V  DPW+P P TF+
Subjt:  KSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFK

Query:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW
         +        +  + +D     W++D +  C V  +   +L+IP+SR    D  +WHF+    Y+VRSGY                             W
Subjt:  PVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY----------------------------AW

Query:  QRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE
        + VW            W    + + +     RR +   G    CG ++ET  H   ECD  RAFWF SPLQLD     G  FI++W+ +   L   E+A 
Subjt:  QRVW----------LSW---LSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAE

Query:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYND--RRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDG
        +A+ +   GLWR+WK RN  +F     D    ++   ++V EFR   ++      +         W         +  DAAW  + +  G  W +    G
Subjt:  DALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYND--RRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDG

Query:  TLWAEGAEG
         L   G +G
Subjt:  TLWAEGAEG

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.6e-21

25.42

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Query:  REAFENILKMIDIRTNGWAEQYLSQAGK----------------------EEINHRLAR----FWWQKKKESRGIHWGSWEDLTKPKSVGGLNLKDIHHF
        ++ F  IL+ +  R +GW E+ LS AG+                      + I +RL +    F W    E +  H   W  +  PK  GGL ++     
Subjt:  REAFENILKMIDIRTNGWAEQYLSQAGK----------------------EEINHRLAR----FWWQKKKESRGIHWGSWEDLTKPKSVGGLNLKDIHHF

Query:  NLALLAKQGWRILKHPDRL----IARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAG-KIILKQGFRWRVGKDSKINVWKDPWI---PRPSTFKPVRCLD
        N AL++K GWR+L+  + L    + + Y     R + +L  + KG  S  WRSI  G + ++  G  W  G   +I  W D W+   P        R  D
Subjt:  NLALLAKQGWRILKHPDRL----IARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAG-KIILKQGFRWRVGKDSKINVWKDPWI---PRPSTFKPVRCLD

Query:  CTWQLAKDFLDDNGVGW--------REDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY-------------------AW-----QR
        C   +AKD L   G GW          +  R  L    +DLV          RD   W F+   ++SVRS Y                    W     +R
Subjt:  CTWQLAKDFLDDNGVGW--------REDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY-------------------AW-----QR

Query:  V----WLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAEDA--LCYLGCG
        V    WL     V   + + RR +      Q C    E++ H L +C      W     Q   R  +G    + +E +Y  L  R   ED          
Subjt:  V----WLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAEDA--LCYLGCG

Query:  LWRVWKERNAILF
        +W  WK R   +F
Subjt:  LWRVWKERNAILF

P93295 Uncharacterized mitochondrial protein AtMg00310

1.7e-20

35.46

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Query:  LSQAGKEEINHRLARFWWQKKKESRGIHWGSWEDLTKPK-SVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGW
        LS+   +++   +  FWW   +  R I W +W+ L K K   GGL  +D+  FN ALLAKQ +RI+  P  L++R+ +  YF H++ +E     R S+ W
Subjt:  LSQAGKEEINHRLARFWWQKKKESRGIHWGSWEDLTKPK-SVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGW

Query:  RSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFKPV
        RSII G+ +L +G    +G      VW D WI   +   P+
Subjt:  RSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFKPV

Arabidopsis top hits

e value

%identity

Alignment

AT2G22440.1 BEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1)

2.2e-10

38.64

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Query:  VWKDPWIP----RPSTFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY
        VWKDPWIP    RP+  K +  +  +     D +D N   W+ DRL+  +   D+ L+L I  SR  + DG  W  T S  Y+V+SGY
Subjt:  VWKDPWIP----RPSTFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY

AT3G09510.1 Ribonuclease H-like superfamily protein

1.8e-17

19.95

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Query:  KCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWI----PRP----STFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRE
        K  YF+  + L+A  + + S+GW S++ G  +LK+G R  +G    I +  D  +    PRP     T+K +   +   +    +       W + ++ +
Subjt:  KCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWI----PRP----STFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRE

Query:  CLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY--------------------------AWQR---------VWLSWLSRVQMGQRKARRGMQ
         +  +D   +  I +++    D  +W++  + EY+VRSGY                           W           +W +    +   +R   RGM+
Subjt:  CLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYSVRSGY--------------------------AWQR---------VWLSWLSRVQMGQRKARRGMQ

Query:  VDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICT
        +D     C RE E++NHAL  C      W  S   L         F  +   I   ++    ++         +WR+WK RN ++F          ++  
Subjt:  VDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIYRGLEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICT

Query:  NREVGEFRDIL---RETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDGT
          E  ++ +     ++T +  R   E   +W      +     DA +  + L     W +    GT
Subjt:  NREVGEFRDIL---RETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDGT

AT4G29090.1 Ribonuclease H-like superfamily protein

1.8e-44

26.36

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Query:  LARFWWQKKKESRGIHWGSWEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQG
        LA FWW+ K+E++G+HW +W+ L+  K+ GG+  KDI  FNLALL KQ WR+L  P+ L+A+V+K  YF  ++ L A    R S+ W+SI A + IL+QG
Subjt:  LARFWWQKKKESRGIHWGSWEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQG

Query:  FRWRVGKDSKINVWKDPWIPRPSTFKPVRCLDCTWQ---------LAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYS
         R  VG    I +W+  W+        +R      Q            D +D++G  WR+D +       +  L+  +    R + D   W +T+S +Y+
Subjt:  FRWRVGKDSKINVWKDPWIPRPSTFKPVRCLDCTWQ---------LAKDFLDDNGVGWREDRLRECLVLADVDLVLAIPVSRRDVRDGAVWHFTNSEEYS

Query:  VRSGY-----------------------AWQRVWLSWLS-------------RVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPL
        V+SGY                        +Q++W S  S              + +    A R +  +     C   +ETVNH L +C   R  W  S +
Subjt:  VRSGY-----------------------AWQRVWLSWLS-------------RVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPL

Query:  QLDTRGYKGLRFIASWEKIYRGLEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGS--QWVTRH
         +   G        +   ++    G    E A   +   LWR+WK RN ++F+    + +  +     ++ E+R          +    + S  +W    
Subjt:  QLDTRGYKGLRFIASWEKIYRGLEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGS--QWVTRH

Query:  LNWSTLWVDAAWIKETLSMGYRWSLHGPDGTLWAEGAEGV
          W     DA W ++    G  W L    G +   GA  +
Subjt:  LNWSTLWVDAAWIKETLSMGYRWSLHGPDGTLWAEGAEGV

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.2e-21

35.46

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Query:  LSQAGKEEINHRLARFWWQKKKESRGIHWGSWEDLTKPK-SVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGW
        LS+   +++   +  FWW   +  R I W +W+ L K K   GGL  +D+  FN ALLAKQ +RI+  P  L++R+ +  YF H++ +E     R S+ W
Subjt:  LSQAGKEEINHRLARFWWQKKKESRGIHWGSWEDLTKPK-SVGGLNLKDIHHFNLALLAKQGWRILKHPDRLIARVYKCCYFRHTNFLEAVAKGRASWGW

Query:  RSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFKPV
        RSII G+ +L +G    +G      VW D WI   +   P+
Subjt:  RSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFKPV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGCACTCAGTTAAGCTTGGGAAGTATTTGGGCCTTGATATCGATTTTGGGGGCTGCAAACGAGAAGCATTTGAAAACATTCTGAAGATGATAGATATAAGAACTAA
TGGCTGGGCAGAGCAATACTTGTCTCAGGCTGGAAAAGAGGAAATCAATCATAGACTTGCACGCTTCTGGTGGCAAAAGAAGAAGGAAAGCAGGGGCATTCACTGGGGCT
CTTGGGAGGATCTAACAAAACCCAAGAGTGTTGGAGGTTTGAACTTGAAAGATATTCACCATTTCAATCTTGCACTATTGGCAAAGCAAGGGTGGAGGATCCTAAAACAT
CCAGATCGTCTGATTGCAAGGGTTTATAAATGCTGTTATTTTCGGCACACGAACTTCTTAGAAGCGGTGGCCAAAGGGAGAGCTTCGTGGGGATGGCGTAGCATCATAGC
AGGAAAGATTATTCTCAAACAAGGGTTTCGCTGGCGGGTGGGAAAGGATTCGAAAATAAATGTTTGGAAGGATCCTTGGATCCCGAGGCCCTCAACATTCAAGCCTGTTA
GATGTTTGGATTGCACATGGCAGCTGGCCAAGGATTTTCTGGATGATAATGGCGTAGGGTGGAGGGAGGATCGCCTGAGAGAATGCTTGGTGCTTGCGGATGTGGACCTA
GTTTTGGCTATCCCAGTCAGCAGGCGAGATGTCAGAGATGGAGCAGTCTGGCATTTCACTAATTCCGAAGAATATTCGGTCAGATCGGGGTACGCATGGCAAAGAGTCTG
GCTTTCATGGCTGAGTCGAGTGCAAATGGGACAGAGAAAAGCTCGAAGGGGTATGCAGGTTGATGGTTGCTGGCAAACTTGTGGGAGAGAAGAAGAGACAGTAAATCATG
CCCTCTTGGAATGTGATCCGACCAGGGCATTCTGGTTTGGCTCCCCTCTTCAGCTGGATACCAGGGGATATAAGGGTCTACGCTTCATTGCGAGTTGGGAGAAAATCTAC
AGAGGATTGGAAGGGAGAGAGAATGCGGAAGACGCCCTTTGCTATTTGGGGTGTGGTTTGTGGAGGGTCTGGAAGGAAAGAAATGCAATACTCTTTAAAAATAGCCACCC
GGACATTGAGTTTAACATCATATGCACCAACAGGGAGGTTGGTGAGTTTAGAGATATTCTTAGAGAGACATACAATGATAGACGAGGGGGGCACGAAAAAGGATCTCAGT
GGGTGACGAGGCATCTGAACTGGTCGACGCTATGGGTTGATGCAGCATGGATAAAGGAGACATTATCCATGGGTTACAGATGGTCACTGCATGGGCCAGATGGAACTCTC
TGGGCTGAGGGTGCAGAGGGGGTGGTAACAACATGA

mRNA sequence

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Protein sequence

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MKHSVKLGKYLGLDIDFGGCKREAFENILKMIDIRTNGWAEQYLSQAGKEEINHRLARFWWQKKKESRGIHWGSWEDLTKPKSVGGLNLKDIHHFNLALLAKQGWRILKH
PDRLIARVYKCCYFRHTNFLEAVAKGRASWGWRSIIAGKIILKQGFRWRVGKDSKINVWKDPWIPRPSTFKPVRCLDCTWQLAKDFLDDNGVGWREDRLRECLVLADVDL
VLAIPVSRRDVRDGAVWHFTNSEEYSVRSGYAWQRVWLSWLSRVQMGQRKARRGMQVDGCWQTCGREEETVNHALLECDPTRAFWFGSPLQLDTRGYKGLRFIASWEKIY
RGLEGRENAEDALCYLGCGLWRVWKERNAILFKNSHPDIEFNIICTNREVGEFRDILRETYNDRRGGHEKGSQWVTRHLNWSTLWVDAAWIKETLSMGYRWSLHGPDGTL
WAEGAEGVVTT

Lag0038498 (gene) of Sponge gourd (AG-4) v1 genome