| GenBank top hits | e value | %identity | Alignment |
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| KAG5561218.1 hypothetical protein RHGRI_004294 [Rhododendron griersonianum] | 2.4e-47 | 40.23 | Show/hide |
Query: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
I I + E++ ALF+M P APGPDGMT FFQ W V RE+ D ++SF G + +HTH
Subjt: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
Query: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
C GR+I+DNI I EI H + KR G + +AVKLDM+KAY+R+EW FLER++ GF +W+GWVMEC+ +VSYS +++ +
Subjt: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
Query: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
G I P RGLRQGDPLSP+LF+LC E + +LQK ++ G + RN PA+S+LF
Subjt: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
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| KAG5561219.1 hypothetical protein RHGRI_004294 [Rhododendron griersonianum] | 2.4e-47 | 40.23 | Show/hide |
Query: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
I I + E++ ALF+M P APGPDGMT FFQ W V RE+ D ++SF G + +HTH
Subjt: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
Query: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
C GR+I+DNI I EI H + KR G + +AVKLDM+KAY+R+EW FLER++ GF +W+GWVMEC+ +VSYS +++ +
Subjt: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
Query: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
G I P RGLRQGDPLSP+LF+LC E + +LQK ++ G + RN PA+S+LF
Subjt: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
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| KAG5561220.1 hypothetical protein RHGRI_004294 [Rhododendron griersonianum] | 2.4e-47 | 40.23 | Show/hide |
Query: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
I I + E++ ALF+M P APGPDGMT FFQ W V RE+ D ++SF G + +HTH
Subjt: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
Query: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
C GR+I+DNI I EI H + KR G + +AVKLDM+KAY+R+EW FLER++ GF +W+GWVMEC+ +VSYS +++ +
Subjt: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
Query: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
G I P RGLRQGDPLSP+LF+LC E + +LQK ++ G + RN PA+S+LF
Subjt: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
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| KAG5561221.1 hypothetical protein RHGRI_004294 [Rhododendron griersonianum] | 2.4e-47 | 40.23 | Show/hide |
Query: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
I I + E++ ALF+M P APGPDGMT FFQ W V RE+ D ++SF G + +HTH
Subjt: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH------------------------------------
Query: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
C GR+I+DNI I EI H + KR G + +AVKLDM+KAY+R+EW FLER++ GF +W+GWVMEC+ +VSYS +++ +
Subjt: -------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
Query: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
G I P RGLRQGDPLSP+LF+LC E + +LQK ++ G + RN PA+S+LF
Subjt: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
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| XP_019091159.1 PREDICTED: uncharacterized protein LOC109128743 [Camelina sativa] | 4.1e-47 | 44.8 | Show/hide |
Query: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH----------------------CTHSEGRLISDNIHIAHEILH
EI +ALF M+P+KAPGPDGMTA FFQ W V+ +++ V F G+ E+ + TH GRLISDNI IA E+ H
Subjt: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH----------------------CTHSEGRLISDNIHIAHEILH
Query: SMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS
+ R G MA+K DM+KAY+R+EWGFL+ + GF +RWI W+M C++SV Y +++N +P+GLI+PERGLRQGDPLSPYLF+LC+EV +QK+
Subjt: SMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS
Query: ----ALTGYAVSRNGPAISNL
+ G V+ P I++L
Subjt: ----ALTGYAVSRNGPAISNL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2N9FT83 Reverse transcriptase domain-containing protein | 3.8e-46 | 48 | Show/hide |
Query: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKA
E+ AL +M P KAPGPDGM F+Q W T+ REV+ V S S T GRLISDN+ IA E LH M+ +R G +M +KLDM+KA
Subjt: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKA
Query: YERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKSA----LTGYAVSRNGPAISNLF
Y+R+EW FL +V+ GF +W+ +MECIT+VSYSL++N +P G I P RGLRQGDP+SPYLF++C+E LL K+A + G ++SR P +++LF
Subjt: YERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKSA----LTGYAVSRNGPAISNLF
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| A0A2N9H680 Reverse transcriptase domain-containing protein | 6.4e-46 | 41.02 | Show/hide |
Query: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHG------------------NAE-------------------------
++D+S EI ALF+M P KAPGPDGMTA FFQ W V +V ++ FF G N E
Subjt: IEDISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHG------------------NAE-------------------------
Query: ------EDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
+ S + C GRLISDN+ +A E+LH + G Y MAVKLDM+KAY+R+EW FL+ +L GF +RW+ +M C+T+ SY++MVN PH
Subjt: ------EDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPH
Query: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
G I P RGLRQGDPLSPYLF+LC+E + L++K+ + G A+ R GP +S+LF
Subjt: GLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
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| A0A2N9HWM9 Reverse transcriptase domain-containing protein | 7.6e-47 | 40.93 | Show/hide |
Query: EDISVP----EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH---------------------------------
ED+ +P E+ ALF+M+P KAPGPDGMTA FFQ W V +V D++ F +G+ + ++TH
Subjt: EDISVP----EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTH---------------------------------
Query: ----------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNN
GR+ISDNI IA EILH + KR G MAVKLDM+KAY+R+EW +L++++ GF RW+ +MEC+TSVSYS++VN
Subjt: ----------------CTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNN
Query: KPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQK----SALTGYAVSRNGPAISNLF
+P G + P RGLRQGDPLSPYLF++C+E T LL+K S + G ++ R GP +S+LF
Subjt: KPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQK----SALTGYAVSRNGPAISNLF
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| A0A2N9J3U0 Reverse transcriptase domain-containing protein | 8.4e-46 | 42.17 | Show/hide |
Query: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTHCT-----------------------------------------
EI ALF+M+P KAPGPDGM A F+Q W V +V + V F G + + TH T
Subjt: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGNAEEDESHTHCT-----------------------------------------
Query: --------HSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPER
GRLI+DNI +A E LH M KR+G MAVKLDM+KAY+R+EW FLE ++ GFDQRW+ +M+C+TSVSYS+M+N +P G I P R
Subjt: --------HSEGRLISDNIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPER
Query: GLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
G+RQGDPLSPYLF++C+E T LLQ++ + G ++ R GP IS+LF
Subjt: GLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNLF
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| A0A6D2K102 RNase H domain-containing protein | 4.9e-46 | 43.27 | Show/hide |
Query: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFF---------MHGNAEEDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTM
E+ A+F ++P+KAPGPDG +A+FF NW+TV +++I V+ FF +H E S GR ISDN+ I HEILH + + M
Subjt: EIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFF---------MHGNAEEDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTM
Query: AVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSR
A+K DM KAY+R+EW F++ VL GF +WIGW+M+C+TSV++ ++N G + P RG+RQGDPLSPYLF+LCSEV + L K+ +TG ++
Subjt: AVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSR
Query: NGPAISNL
GP +++L
Subjt: NGPAISNL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P11369 LINE-1 retrotransposable element ORF2 protein | 2.8e-06 | 28.12 | Show/hide |
Query: NIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCS
NI + ++H +N + N M + LD KA+++I+ F+ +VL G ++ + + ++ VN + I + G RQG PLSPYLF +
Subjt: NIHIAHEILHSMNGKRRGNGYTMAVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLFVLCS
Query: EVFT-FLLQKSALTGYAVSRNGPAISNL
EV + Q+ + G + + IS L
Subjt: EVFT-FLLQKSALTGYAVSRNGPAISNL
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 1.6e-09 | 25 | Show/hide |
Query: ISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGN------------------------------------------------
I++ E+ +AL M K+PG DG+T FFQ W T+ + + F G
Subjt: ISVPEIERALFEMNPEKAPGPDGMTAAFFQDNWKTVQREVIDTVKSFFMHGN------------------------------------------------
Query: -----AEEDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMA-VKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNK
D+S+T GR I DN+ + ++LH R G ++A + LD KA++R++ +L L + F +++G++ S + +N
Subjt: -----AEEDESHTHCTHSEGRLISDNIHIAHEILHSMNGKRRGNGYTMA-VKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNK
Query: PHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKSALTG
+ RG+RQG PLS L+ L E F LL+K LTG
Subjt: PHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKSALTG
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| P92555 Uncharacterized mitochondrial protein AtMg01250 | 6.5e-11 | 51.61 | Show/hide |
Query: MVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNL
++N P GL+ P RGLRQGDPLSPYLF+LC+EV + L +++ L G VS N P I++L
Subjt: MVNNKPHGLILPERGLRQGDPLSPYLFVLCSEVFTFLLQKS----ALTGYAVSRNGPAISNL
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| Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) | 6.3e-06 | 33.33 | Show/hide |
Query: RRGNGYTM-AVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLF-VLCSEVFTFL
RR G T V LD+ KA++ + + R + FG D ++M IT +++V + I G++QGDPLSP LF ++ E+ T L
Subjt: RRGNGYTM-AVKLDMAKAYERIEWGFLERVLSIFGFDQRWIGWVMECITSVSYSLMVNNKPHGLILPERGLRQGDPLSPYLF-VLCSEVFTFL
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