; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038501 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038501
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:18772625..18773863
RNA-Seq ExpressionLag0038501
SyntenyLag0038501
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5477665.1 hypothetical protein F2P56_004284, partial [Juglans regia]4.5e-1536.17Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ
        + + LPFD   Q V   +G  +GR    +  VD +G+   K++R++VELDITK L+RGL +  +  K W++ KYERLP  C  CG++ H    CSN+  +
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ

Query:  TKQGSPMFGEWLRVGPPMSKQKEERSEASRREERSPERRPK
         ++G   +G WLR   P+ ++ E      ++   SP+  PK
Subjt:  TKQGSPMFGEWLRVGPPMSKQKEERSEASRREERSPERRPK

PQQ04601.1 uncharacterized protein Pyn_40319 [Prunus yedoensis var. nudiflora]7.6e-1537.11Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNK
        + H LP DCRG+    ++G ++G ++  +   +  G  +++Y+R++V +D +KPL RG+++ +   K WI  KYERLP FC+ CG++GH +  C  K
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNK

XP_042942840.1 uncharacterized protein LOC122277023 [Carya illinoinensis]2.6e-1530.77Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ
        ++  +PF C  + +   VG  +G++   +  VD +G+   K++R++VE+DITKPL+RG+ +  E  + WI ++YERLP FC +CG + HT+  C   +++
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ

Query:  TKQGSPMFGEWLRVGPP------MSKQKEERSEASRREERSPERRPKVKEPMTNHQ
         KQ    +G WLR   P        K   + +  +  E +S  ++ +V++ + + Q
Subjt:  TKQGSPMFGEWLRVGPP------MSKQKEERSEASRREERSPERRPKVKEPMTNHQ

XP_042942875.1 uncharacterized protein LOC122277059 [Carya illinoinensis]6.9e-1632.53Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ
        ++  +PF C  + +   VG  +G++   +  VD +G+   K++R++VE+DITKPL+RG+ +  E  + WI ++YERLP FC +CG + HT+  C+  +++
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ

Query:  TKQGSPMFGEWLRVGPP-------------MSKQKEERSEASRREERSPERRPKVKEPMTNHQAVE
         KQ    +G WLR   P             M+ + E   ++ R+EE   E R +V+    N Q V+
Subjt:  TKQGSPMFGEWLRVGPP-------------MSKQKEERSEASRREERSPERRPKVKEPMTNHQAVE

XP_042955682.1 uncharacterized protein LOC122291574 [Carya illinoinensis]2.6e-1534.48Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ
        ++  +PF C  + +   VG  +G++   +  VD +G+   K++R++VE+DITKPL+RG+ +  E  + WI ++YERLP FC +CG + HT+  C + +++
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ

Query:  TKQGSPMFGEWLRVGPPM-SKQKEERSEASRREERSPERRPKVKE
         KQ    +G WLR   P  S    ++   +   E  PER+   KE
Subjt:  TKQGSPMFGEWLRVGPPM-SKQKEERSEASRREERSPERRPKVKE

TrEMBL top hitse value%identityAlignment
A0A2I4FCX5 uncharacterized protein LOC1089976089.1e-1435.4Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ
        ++H +P       V   VGG +GR+   + + D +G+   K++R++VE+DITK L+RG+ +  +  K W+  KYERLP FC  CG++ H    C    + 
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ

Query:  TKQGSPMFGEWLR
        + Q    +G WLR
Subjt:  TKQGSPMFGEWLR

A0A2K3KY15 Cysteine desulfurase mitochondrial-like3.4e-1331.41Show/hide
Query:  KITSESKLADYEDRQWCLIGEIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRF
        KIT E +LA+++  +   +  I+ LP   R  ++AK +G  IG   +EE +  +K  +   ++R++V +D+ KPL RG +V  +     ++ KYERLP F
Subjt:  KITSESKLADYEDRQWCLIGEIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRF

Query:  CSSCGIMGHTSLWCSNKQH------QTKQGSPMFGEWLRVG-PPMSKQKEERSEAS
        C +CG +GH    C + +       + ++    FG WL+   PP    +E+ S +S
Subjt:  CSSCGIMGHTSLWCSNKQH------QTKQGSPMFGEWLRVG-PPMSKQKEERSEAS

A0A2N9GET6 CCHC-type domain-containing protein4.8e-1535.9Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ
        ++HGLP D    T  K +G K+GR+   +    +  + Q KYVR++VE+++ KPL+ G+     D + WI +KYE++P FC SCG +GH    C +   +
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQ

Query:  TKQ----GSPMFGEWLR
                  +FG+WLR
Subjt:  TKQ----GSPMFGEWLR

A0A314YDX0 CCHC-type domain-containing protein3.7e-1537.11Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNK
        + H LP DCRG+    ++G ++G ++  +   +  G  +++Y+R++V +D +KPL RG+++ +   K WI  KYERLP FC+ CG++GH +  C  K
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNK

A0A314YHJ0 CCHC-type domain-containing protein3.7e-1537.11Show/hide
Query:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNK
        + H LP DCRG+    ++G ++G ++  +   +  G  +++Y+R++V +D +KPL RG+++ +   K WI  KYERLP FC+ CG++GH +  C  K
Subjt:  EIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGHTSLWCSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding6.4e-0438.78Show/hide
Query:  KYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGH
        ++ R+ +E+++ KPL +G +++N D     ++ YE L + CSSCGI GH
Subjt:  KYVRLKVELDITKPLVRGLIVVNEDVKKWIWIKYERLPRFCSSCGIMGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGTCCATTGAGGACATTTTGGCTAGGTTTAATATTTCAGAGAGCGAGTGTGAGGCAGTAAAGATCACTAGTGAATCTAAGCTAGCAGACTACGAGGATCGACA
GTGGTGTCTGATTGGTGAGATTCATGGCCTCCCGTTTGATTGTCGTGGTCAAACCGTAGCAAAGATGGTGGGAGGGAAGATTGGCAGAATTACTAATGAGGAAGGAGAGG
TGGACATAAAAGGGGTTCAACAGCGAAAGTATGTTCGGCTGAAAGTGGAGCTGGATATCACTAAACCGCTAGTTCGAGGGTTAATTGTCGTCAATGAGGACGTCAAGAAA
TGGATATGGATCAAGTATGAAAGGTTGCCTAGGTTCTGCTCCTCATGCGGAATCATGGGGCATACCTCTCTGTGGTGCAGTAATAAGCAACACCAAACGAAACAGGGGTC
TCCGATGTTTGGAGAGTGGCTGAGAGTAGGACCGCCAATGTCCAAACAGAAGGAGGAACGGTCTGAGGCTAGCCGACGGGAAGAACGTAGTCCGGAGCGGCGGCCGAAGG
TGAAAGAACCGATGACGAATCACCAGGCTGTGGAAAATGCTGGGAAAGATCTAGGAGAAGATCTCGGAAAGAATCCAGAGGATATCTCGGTAAGCAGTGATAAGGTGGTT
GAGATGGAGACTACGCAGTCAACAGGGGAGAAACAGACGTTATCTGGTGGGGCCACTGAAAGCTCTAATCGAGCCGATGGGCCTTTAAACAAAGGGAACCCAGGCCCATC
AGATGGGATGGAATGGATCGTTAAGGAGGGAAACGGATTTGGGCAGACGTCATCGCTTCTTGGGCTTAAGCGGAAATGTCGGGCAGGAAAACGGAAATTAGATGAATCAG
GAGATGTGGGTCCGGATAAAAAATTGAAGGGGTCTCAGGAAGAAAGAGACACAATTCAGAAGGCGAGGGGGACTGGCCTTGATAGGTCCCCCCAGGGGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGTCCATTGAGGACATTTTGGCTAGGTTTAATATTTCAGAGAGCGAGTGTGAGGCAGTAAAGATCACTAGTGAATCTAAGCTAGCAGACTACGAGGATCGACA
GTGGTGTCTGATTGGTGAGATTCATGGCCTCCCGTTTGATTGTCGTGGTCAAACCGTAGCAAAGATGGTGGGAGGGAAGATTGGCAGAATTACTAATGAGGAAGGAGAGG
TGGACATAAAAGGGGTTCAACAGCGAAAGTATGTTCGGCTGAAAGTGGAGCTGGATATCACTAAACCGCTAGTTCGAGGGTTAATTGTCGTCAATGAGGACGTCAAGAAA
TGGATATGGATCAAGTATGAAAGGTTGCCTAGGTTCTGCTCCTCATGCGGAATCATGGGGCATACCTCTCTGTGGTGCAGTAATAAGCAACACCAAACGAAACAGGGGTC
TCCGATGTTTGGAGAGTGGCTGAGAGTAGGACCGCCAATGTCCAAACAGAAGGAGGAACGGTCTGAGGCTAGCCGACGGGAAGAACGTAGTCCGGAGCGGCGGCCGAAGG
TGAAAGAACCGATGACGAATCACCAGGCTGTGGAAAATGCTGGGAAAGATCTAGGAGAAGATCTCGGAAAGAATCCAGAGGATATCTCGGTAAGCAGTGATAAGGTGGTT
GAGATGGAGACTACGCAGTCAACAGGGGAGAAACAGACGTTATCTGGTGGGGCCACTGAAAGCTCTAATCGAGCCGATGGGCCTTTAAACAAAGGGAACCCAGGCCCATC
AGATGGGATGGAATGGATCGTTAAGGAGGGAAACGGATTTGGGCAGACGTCATCGCTTCTTGGGCTTAAGCGGAAATGTCGGGCAGGAAAACGGAAATTAGATGAATCAG
GAGATGTGGGTCCGGATAAAAAATTGAAGGGGTCTCAGGAAGAAAGAGACACAATTCAGAAGGCGAGGGGGACTGGCCTTGATAGGTCCCCCCAGGGGCCATGA
Protein sequenceShow/hide protein sequence
MEESIEDILARFNISESECEAVKITSESKLADYEDRQWCLIGEIHGLPFDCRGQTVAKMVGGKIGRITNEEGEVDIKGVQQRKYVRLKVELDITKPLVRGLIVVNEDVKK
WIWIKYERLPRFCSSCGIMGHTSLWCSNKQHQTKQGSPMFGEWLRVGPPMSKQKEERSEASRREERSPERRPKVKEPMTNHQAVENAGKDLGEDLGKNPEDISVSSDKVV
EMETTQSTGEKQTLSGGATESSNRADGPLNKGNPGPSDGMEWIVKEGNGFGQTSSLLGLKRKCRAGKRKLDESGDVGPDKKLKGSQEERDTIQKARGTGLDRSPQGP