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Lag0038510 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038510
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr2:19154361..19155040
RNA-Seq ExpressionLag0038510
SyntenyLag0038510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG66120.1 hypothetical protein EZV62_007395 [Acer yangbiense]2.4e-1447.83Show/hide
Query:  LLNHIIAFDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFVLIVPHLL
        ++N+ IA+++  +L+    S+STARI+ L+SQL  +RK+  +++QYL Q KD+ADKF+ +GEPLSY  HLGY  EGLG EY+ FV  + +++
Subjt:  LLNHIIAFDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFVLIVPHLL

TXG68750.1 hypothetical protein EZV62_003685 [Acer yangbiense]1.5e-1144.55Show/hide
Query:  LTDSIYLLWKNQLLNHII----AFDMKASLTSSSTARIMGL----RSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPF
        L +S+ +   + ++ H I    + + K S+ SSS      L    RSQL  ++K+  +++QYL Q K++ DKF+AIGEPLSY DHLGY+LEGLG EY+ F
Subjt:  LTDSIYLLWKNQLLNHII----AFDMKASLTSSSTARIMGL----RSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPF

Query:  V
        V
Subjt:  V

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]2.4e-2239.68Show/hide
Query:  FNSTAPVYLSPQP---SIPPYPTITPPLNVKLTDSIYLLWKNQLLNHIIA--------------------------------------------------
        F    P +L+  P   S  P+PT+  PLNVKL D+ +LLWKNQLLN +IA                                                  
Subjt:  FNSTAPVYLSPQP---SIPPYPTITPPLNVKLTDSIYLLWKNQLLNHIIA--------------------------------------------------

Query:  -----------FDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV
                    D+ +SLT    S +TARIMGL+++LQ +RKD  SVSQYLA+IK++ADKF+A+GEPLSY DHL ++L+GLG+EYN FV
Subjt:  -----------FDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV

XP_038887133.1 uncharacterized protein LOC120077323 [Benincasa hispida]2.5e-1966.28Show/hide
Query:  QLLNHIIAFDMKASL----TSSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV
        +++ +  AFD+  +L     SSS A IMG  SQLQKI+KD L+VSQYLAQIKDV D F+AIGEPLSY DHL YILEGLG+EYNPFV
Subjt:  QLLNHIIAFDMKASL----TSSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV

XP_038891713.1 uncharacterized protein LOC120081111 [Benincasa hispida]1.4e-1471.19Show/hide
Query:  MGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV
        M L+++LQKIRKD LS+SQYL+QIKDVADKFS +GE +SY DHL +IL+GLG+EYN FV
Subjt:  MGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV

TrEMBL top hitse value%identityAlignment
A0A438BWQ3 Uncharacterized protein2.7e-1157.58Show/hide
Query:  SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV
        S S A ++GL SQLQ+I+K+ +++S+YLA+IK+V DK+SA+GEPLSY D L Y L GL  EY+ FV
Subjt:  SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV

A0A438IT10 Uncharacterized protein2.7e-1157.58Show/hide
Query:  SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV
        S S A ++GL SQLQ+I+K+ +++S+YLA+IK+V DK+SA+GEPLSY D L Y L GL  EY+ FV
Subjt:  SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV

A0A5C7I9Y1 Uncharacterized protein1.2e-1447.83Show/hide
Query:  LLNHIIAFDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFVLIVPHLL
        ++N+ IA+++  +L+    S+STARI+ L+SQL  +RK+  +++QYL Q KD+ADKF+ +GEPLSY  HLGY  EGLG EY+ FV  + +++
Subjt:  LLNHIIAFDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFVLIVPHLL

A0A5C7IHH0 Uncharacterized protein7.2e-1244.55Show/hide
Query:  LTDSIYLLWKNQLLNHII----AFDMKASLTSSSTARIMGL----RSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPF
        L +S+ +   + ++ H I    + + K S+ SSS      L    RSQL  ++K+  +++QYL Q K++ DKF+AIGEPLSY DHLGY+LEGLG EY+ F
Subjt:  LTDSIYLLWKNQLLNHII----AFDMKASLTSSSTARIMGL----RSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPF

Query:  V
        V
Subjt:  V

A0A6J1DQX7 uncharacterized protein LOC1110223151.2e-2239.68Show/hide
Query:  FNSTAPVYLSPQP---SIPPYPTITPPLNVKLTDSIYLLWKNQLLNHIIA--------------------------------------------------
        F    P +L+  P   S  P+PT+  PLNVKL D+ +LLWKNQLLN +IA                                                  
Subjt:  FNSTAPVYLSPQP---SIPPYPTITPPLNVKLTDSIYLLWKNQLLNHIIA--------------------------------------------------

Query:  -----------FDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV
                    D+ +SLT    S +TARIMGL+++LQ +RKD  SVSQYLA+IK++ADKF+A+GEPLSY DHL ++L+GLG+EYN FV
Subjt:  -----------FDMKASLT----SSSTARIMGLRSQLQKIRKDRLSVSQYLAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTCGTTTTACATGAAAACACTATATTATTACTTGACCCGTACACTTGCGGTAAGCAAATTGCACATCACTACTCAACATTCAACTCTACTGCCCCTGTTTATCT
CTCCCCTCAACCATCGATTCCACCATATCCAACCATAACGCCTCCTCTGAATGTTAAACTCACTGACTCCATCTATCTCCTCTGGAAGAATCAGCTGTTGAACCACATTA
TAGCATTTGATATGAAAGCTTCATTGACGTCATCATCTACAGCTAGGATTATGGGCCTTCGGTCACAATTGCAGAAAATTAGGAAAGATCGGTTGTCGGTTTCTCAATAT
CTTGCCCAAATTAAGGATGTTGCTGACAAATTTTCAGCCATTGGTGAGCCTCTTTCGTATCATGATCATTTAGGGTACATTCTAGAGGGTCTTGGCACTGAATATAATCC
GTTTGTACTGATCGTCCCTCACTTGCTGATGTCTGAAGCCTTCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACTCGTTTTACATGAAAACACTATATTATTACTTGACCCGTACACTTGCGGTAAGCAAATTGCACATCACTACTCAACATTCAACTCTACTGCCCCTGTTTATCT
CTCCCCTCAACCATCGATTCCACCATATCCAACCATAACGCCTCCTCTGAATGTTAAACTCACTGACTCCATCTATCTCCTCTGGAAGAATCAGCTGTTGAACCACATTA
TAGCATTTGATATGAAAGCTTCATTGACGTCATCATCTACAGCTAGGATTATGGGCCTTCGGTCACAATTGCAGAAAATTAGGAAAGATCGGTTGTCGGTTTCTCAATAT
CTTGCCCAAATTAAGGATGTTGCTGACAAATTTTCAGCCATTGGTGAGCCTCTTTCGTATCATGATCATTTAGGGTACATTCTAGAGGGTCTTGGCACTGAATATAATCC
GTTTGTACTGATCGTCCCTCACTTGCTGATGTCTGAAGCCTTCTCCTAG
Protein sequenceShow/hide protein sequence
MTLVLHENTILLLDPYTCGKQIAHHYSTFNSTAPVYLSPQPSIPPYPTITPPLNVKLTDSIYLLWKNQLLNHIIAFDMKASLTSSSTARIMGLRSQLQKIRKDRLSVSQY
LAQIKDVADKFSAIGEPLSYHDHLGYILEGLGTEYNPFVLIVPHLLMSEAFS