; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038513 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038513
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr2:19219154..19222024
RNA-Seq ExpressionLag0038513
SyntenyLag0038513
Gene Ontology termsGO:0006313 - transposition, DNA-mediated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004803 - transposase activity (molecular function)
InterPro domainsIPR001207 - Transposase, mutator type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4306440.1 unnamed protein product [Prunus armeniaca]3.6e-3333.69Show/hide
Query:  VEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI------
        VE ETK++ +WFL LL DDLG     G+ F+SDQQKGL   FD V P   HR+CVRH+Y NF++ +KG GLK++ W+A R    H+F+  M ++      
Subjt:  VEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI------

Query:  ----------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQS-RNCTPTWAGNMMF--------------------
                        A DKPI+ MLE I+  +M RL  K+   +  EG + P++QKK++K K+ S RNC PT AG   +                    
Subjt:  ----------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQS-RNCTPTWAGNMMF--------------------

Query:  -----------------------------------ETLMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRD
                                           +T +  Y   I  V   ++WP++    LLPP +R+ PGRPKR R++D
Subjt:  -----------------------------------ETLMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRD

KAE8684549.1 hypothetical protein F3Y22_tig00111127pilonHSYRG00005 [Hibiscus syriacus]8.0e-3335.19Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKH--FKGLGLKNMFWNATRTTTKHEFDNIMTEI---
        VVE+E + S TWFL LL  DL    S   TF+SD+QKGLV     V PN  HR CVRHLY+NF+ +  FKG  LK+  W A R T K EF++ M E+   
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKH--FKGLGLKNMFWNATRTTTKHEFDNIMTEI---

Query:  --------------------------------------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPT
                                                    A DKPI+ ++  I+  +M  +S K ++ + + G L PR+QKK++    QS  C PT
Subjt:  --------------------------------------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPT

Query:  WAGNM------------------------MFETLMNIYSFFIKLVNDHSLW-PRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSH
         AG +                           T   IYS FI+ +   + W   TT EP++PP IRRPPGRPK++ R +V+E T+SH
Subjt:  WAGNM------------------------MFETLMNIYSFFIKLVNDHSLW-PRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSH

RYR07524.1 hypothetical protein Ahy_B05g074894 [Arachis hypogaea]2.1e-3335.06Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        VVE ETKD+ TWFL+ L DD G    +G TF+SDQQKGLVPTFD++ P V+HRFCVRHLY+NF+K F GL LK M WNA + T   E +  M EI     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  ------------------------------------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA
                                                  A +KPI+ MLE I+ ++M R +  ++    +  E+ PR++ K++K    S     T+A
Subjt:  ------------------------------------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA

Query:  GNMMFETLMNI----------------YSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDE
        G   +E   N+                Y   +  +N  +LW +T ++ +LPP  R+P GR K +R +  DE
Subjt:  GNMMFETLMNI----------------YSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDE

XP_023877950.1 uncharacterized protein LOC111990411 [Quercus suber]8.6e-3534.71Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        VVEAETK+S TWFLS L +D+G    + +TF+SDQQKGLVPTFD++ P V+HRFCVRHLYNNF K  KG  LK+  W A R T   +F   M  I     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA
         AW                                         DKPII M+E I+  +M R  K ++L + ++G + PR+Q K++  KI SR     W 
Subjt:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA

Query:  GN------------------------------MMFETLMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR
        G+                                 E+L   +   +   +  +LWP++  +P+LPP  RR PGRPK+ R+R+ DE  + ++
Subjt:  GN------------------------------MMFETLMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR

XP_030963877.1 uncharacterized protein LOC115985042 [Quercus lobata]1.6e-3338.98Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        VVEAETKDS  WF+  L DD+G+   +G+TF+SDQQKGL   FD++ P V+HRFCVRHLYNNF K +KG  LK+  W A R T   EF   M +I     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  ---AWDKPIIQMLETIQKFVMS-RLSKKQELYSGWEG---ELRPRVQKKMDK--CKIQSRNCT-PTW-------------AGNM------------MFET
            WDKPII MLE I+  +M+  + KK+++   W G   E +  V K  DK    I+ R C+  +W              G M              E+
Subjt:  ---AWDKPIIQMLETIQKFVMS-RLSKKQELYSGWEG---ELRPRVQKKMDK--CKIQSRNCT-PTW-------------AGNM------------MFET

Query:  LMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR
        L   Y   +  +N   LWP++  E +LPPK  R  GRPK++R+++  E  + ++
Subjt:  LMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR

TrEMBL top hitse value%identityAlignment
A0A2N9F2C7 CCHC-type domain-containing protein5.4e-3535.54Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        V EAE K+S  WFL +L  D+G+   + +TF+SDQQKGLVPTF  + P V+HRFCVRHLYNNF K FKG  LK+  W A R T   EF+  M +I     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA
         AW                                         DKPII M+E I+  +M R  K + +   ++G + PR+ KK++  K  SR  TP W+
Subjt:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA

Query:  GN---MMFETLM-----------------NIYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR
        G+    ++E  M                 N+ SF +        +N   LWP++  + +LPP  R+ PGRPK++RRR+ DE  +++R
Subjt:  GN---MMFETLM-----------------NIYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR

A0A2N9I0N2 SWIM-type domain-containing protein1.6e-3432.28Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        V EAE+ ++ TWFL  L  D+G     G+ FVSDQQKGLVP    V     HRFCVRHL+ NF+K+ KG  LK++ W A R +T  EFD  M E+     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  ------------------------------------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA
                                                  A  KPII MLETI++++M+R+ K ++    ++G + PR+Q+K+ KCK +S+ CTP W 
Subjt:  ------------------------------------------AWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA

Query:  GNMMFE------------------------------------------------------TLMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPK
        G   +E                                                      T + +YS  I+  N    WP    +P+LPP  RR PGRPK
Subjt:  GNMMFE------------------------------------------------------TLMNIYSFFIKLVNDHSLWPRTTYEPLLPPKIRRPPGRPK

Query:  R-QRRRDVDEATSSHR
        R  RR+D DE  +SH+
Subjt:  R-QRRRDVDEATSSHR

A0A2N9IHF9 CCHC-type domain-containing protein1.1e-3535.54Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        V EAE K+S  WFL +L  D+G+   + +TF+SDQQKGLVPTF+ + P V+HRFCVRHLYNNF K FKG  LK+  W A R T   EF+  M +I     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA
         AW                                         DKPII M+E I+  +M R  K + +   ++G + PR+ KK++  K  SR  TP W+
Subjt:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA

Query:  GN---MMFETLM-----------------NIYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR
        G+    ++E  M                 N+ SF +        +N   LWP++  + +LPP  R+ PGRPK++RRR+ DE  +++R
Subjt:  GN---MMFETLM-----------------NIYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR

A0A2N9J1P5 CCHC-type domain-containing protein1.4e-3535.54Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----
        V EAE K+S  WFL +L  D+G+   + +TF+SDQQKGLVPTF+ + P V+HRFCVRHLYNNF K FKG  LK+  W A R T   EF+  M +I     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEI-----

Query:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA
         AW                                         DKPII M+E I+  +M R  K + +   ++G + PR+ KK++  K  SR  TP W+
Subjt:  -AW-----------------------------------------DKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWA

Query:  GN---MMFETLM-----------------NIYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR
        G+    ++E  M                 N+ SF +        +N   LWP++  + +LPP  R+ PGRPK++RRR+ DE  +++R
Subjt:  GN---MMFETLM-----------------NIYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR

A0A2N9J841 CCHC-type domain-containing protein9.5e-4039.3Show/hide
Query:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEIA----
        V EAE K+S  WFL +L  D+G+   + +TF+SDQQKGLVPTF+ + P V+HRFCVRHLYNNF K FKG  LK+  W A R T   EF+  M +I     
Subjt:  VVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQKHFKGLGLKNMFWNATRTTTKHEFDNIMTEIA----

Query:  -------------WDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWAGN---MMFETLM-----------------N
                     WDKPII M+E I+  +M R  K + +   ++G + PR+ KK++  K  SR  TP W+G+    ++E  M                 N
Subjt:  -------------WDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWAGN---MMFETLM-----------------N

Query:  IYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR
        + SF +        +N   LWP++  + +LPP  R+ PGRPK++RRR+ DE  +++R
Subjt:  IYSFFIKL------VNDHSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTTTAATTTCGGATGAACACAATCCAAATGAAGTAGCCTTCAACTTTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATGATACCTCTAG
TGATGTTTATGAGGATGTGCAAAGAGGTGAAGGGTCTGACAACAATGATAAGGAACCAACTTCACCCAATTTAGAATTAGATGTGCAGGTCGAGATTGAAGAGGAAGTTG
AATCGATTTATGGGTCAGAAGATGTCCTGAATAATCCACATAATTCTGATGGGGAGGAGGTGGATGAAGCACCGGAGTTTAGGGTTGAGGCCGATGTAGATCATATTCGA
TTCTGTGTTGCTATGAAATTTAGCATTTCTAAAATCTTAAAATATGTTATAAAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAG
AGTCACTGCAATTTGTTATGATGGGTTTGTGGTGGAGGCGGAGACTAAAGATAGCCGGACATGGTTTCTTTCTCTCCTTCAAGATGATCTAGGCAACTTTTACTCTAAGG
GATTTACTTTCGTATCAGACCAACAAAAGGGTCTTGTTCCGACTTTTGATGACGTGTTCCCAAATGTCAACCATAGGTTCTGTGTGCGACATTTGTACAATAATTTTCAG
AAGCATTTCAAAGGTTTGGGTTTGAAAAACATGTTTTGGAATGCTACGAGAACCACTACAAAGCATGAGTTTGACAATATTATGACGGAAATTGCATGGGATAAACCAAT
AATCCAAATGCTTGAGACTATTCAAAAATTTGTCATGTCTAGATTGTCAAAGAAACAAGAGCTTTATAGTGGATGGGAAGGAGAGTTAAGGCCTAGAGTGCAGAAAAAAA
TGGATAAATGTAAGATTCAATCTAGAAATTGCACGCCAACATGGGCGGGAAACATGATGTTTGAGACATTGATGAACATTTACTCCTTCTTCATCAAACTTGTCAATGAT
CACTCTTTATGGCCAAGAACCACATATGAACCTTTGCTACCACCCAAGATCCGAAGGCCTCCTGGTAGACCAAAAAGGCAGAGAAGAAGAGATGTTGACGAAGCCACATC
ATCTCATAGGAAGCAAGGCATTCAGGAGGTTGAAACTGAAGCTACTATTGAGGGAATGACGTCGGAAGGTGGGAGTTACTTTATTGTAGTCTTATCAGCAGGATCCTCCC
GGAACTCTGGATTTTTTGGAATGTGTTTCAGCTCCAATGACGTGCTACTGATCAAGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTTTAATTTCGGATGAACACAATCCAAATGAAGTAGCCTTCAACTTTGAACAACTTAATGGTGAAGCGAGAATTTACTCGATTGATTGGTATGATACCTCTAG
TGATGTTTATGAGGATGTGCAAAGAGGTGAAGGGTCTGACAACAATGATAAGGAACCAACTTCACCCAATTTAGAATTAGATGTGCAGGTCGAGATTGAAGAGGAAGTTG
AATCGATTTATGGGTCAGAAGATGTCCTGAATAATCCACATAATTCTGATGGGGAGGAGGTGGATGAAGCACCGGAGTTTAGGGTTGAGGCCGATGTAGATCATATTCGA
TTCTGTGTTGCTATGAAATTTAGCATTTCTAAAATCTTAAAATATGTTATAAAGGACTATGCACTTAAGGAGTCTTACAATGTGAAGCTAAAAAAGAATGACAAGAAAAG
AGTCACTGCAATTTGTTATGATGGGTTTGTGGTGGAGGCGGAGACTAAAGATAGCCGGACATGGTTTCTTTCTCTCCTTCAAGATGATCTAGGCAACTTTTACTCTAAGG
GATTTACTTTCGTATCAGACCAACAAAAGGGTCTTGTTCCGACTTTTGATGACGTGTTCCCAAATGTCAACCATAGGTTCTGTGTGCGACATTTGTACAATAATTTTCAG
AAGCATTTCAAAGGTTTGGGTTTGAAAAACATGTTTTGGAATGCTACGAGAACCACTACAAAGCATGAGTTTGACAATATTATGACGGAAATTGCATGGGATAAACCAAT
AATCCAAATGCTTGAGACTATTCAAAAATTTGTCATGTCTAGATTGTCAAAGAAACAAGAGCTTTATAGTGGATGGGAAGGAGAGTTAAGGCCTAGAGTGCAGAAAAAAA
TGGATAAATGTAAGATTCAATCTAGAAATTGCACGCCAACATGGGCGGGAAACATGATGTTTGAGACATTGATGAACATTTACTCCTTCTTCATCAAACTTGTCAATGAT
CACTCTTTATGGCCAAGAACCACATATGAACCTTTGCTACCACCCAAGATCCGAAGGCCTCCTGGTAGACCAAAAAGGCAGAGAAGAAGAGATGTTGACGAAGCCACATC
ATCTCATAGGAAGCAAGGCATTCAGGAGGTTGAAACTGAAGCTACTATTGAGGGAATGACGTCGGAAGGTGGGAGTTACTTTATTGTAGTCTTATCAGCAGGATCCTCCC
GGAACTCTGGATTTTTTGGAATGTGTTTCAGCTCCAATGACGTGCTACTGATCAAGCACTAG
Protein sequenceShow/hide protein sequence
MVFLISDEHNPNEVAFNFEQLNGEARIYSIDWYDTSSDVYEDVQRGEGSDNNDKEPTSPNLELDVQVEIEEEVESIYGSEDVLNNPHNSDGEEVDEAPEFRVEADVDHIR
FCVAMKFSISKILKYVIKDYALKESYNVKLKKNDKKRVTAICYDGFVVEAETKDSRTWFLSLLQDDLGNFYSKGFTFVSDQQKGLVPTFDDVFPNVNHRFCVRHLYNNFQ
KHFKGLGLKNMFWNATRTTTKHEFDNIMTEIAWDKPIIQMLETIQKFVMSRLSKKQELYSGWEGELRPRVQKKMDKCKIQSRNCTPTWAGNMMFETLMNIYSFFIKLVND
HSLWPRTTYEPLLPPKIRRPPGRPKRQRRRDVDEATSSHRKQGIQEVETEATIEGMTSEGGSYFIVVLSAGSSRNSGFFGMCFSSNDVLLIKH