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Lag0038519 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038519
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:19324264..19325442
RNA-Seq ExpressionLag0038519
SyntenyLag0038519
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.5e-2546.09Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        M+FR V+ WVHF +L +   N +MA RLGNAIG FE+ +     + W   LRVRVR D+ K    GIK+ L G +G CW PI+YE+LP+    CG + H 
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSCSQYLNEVFSVSPKHEYGPWMQYSG
         K CS     V SVS   +YGPW+++ G
Subjt:  FKSCSQYLNEVFSVSPKHEYGPWMQYSG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]9.4e-1737.14Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWR-ESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGH
        M F F  FW+    +P +  +  MA  LG  +G  EE + G+   GW    +RVRV++D++K  + GIK+    G    W P+RYEKLP+ C  CG IGH
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWR-ESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGH

Query:  NFKSCSQYLNEVFSVSPKHEYGPWMQYSGRTTMMYRSASN
        + + C Q    V + SP+ +YG W+    R T++ +S S+
Subjt:  NFKSCSQYLNEVFSVSPKHEYGPWMQYSGRTTMMYRSASN

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.3e-3048.06Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        +EF  V FW+H  +LPM   N +MA RLGNAIG+F + D   +G+ W  SLR+RV +DITK  + GIK+ + G +G CW PI+YE+LP+ C FCGVIGH+
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSC-SQYLNEVFSVSPKHEYGPWMQYSG
           C ++YL          EYGPW+++ G
Subjt:  FKSC-SQYLNEVFSVSPKHEYGPWMQYSG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.2e-1830.95Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        ++F  +  WV F +LP+      MA RLGNA+G FEE D  +    W  +LRVRV LDI+K  + GIK+ L G +G  W PI+YE+LP+ C  CG     
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSCSQYLNEVFSVSPKHEYGPWMQYSGR---TTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSEAKLMDILPAAMIEPQMPPLM
                  + S   KH+YG W++Y G    T    +      L K  N S +   + +   +  V     T   A+     +   P    EP      
Subjt:  FKSCSQYLNEVFSVSPKHEYGPWMQYSGR---TTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSEAKLMDILPAAMIEPQMPPLM

Query:  ENNIAINDGQ
        ++ + I++G+
Subjt:  ENNIAINDGQ

XP_042952131.1 uncharacterized protein LOC122289219 [Carya illinoinensis]9.4e-1732.45Show/hide
Query:  TFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQ
        +FW+   E+P++  N  +   +GN IG  EE D+      W E +R+RVR+DI++    G++V L G  G CW    YE+LP  C +CG +GH FK C  
Subjt:  TFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQ

Query:  YLNEVFSVSPKHEYGPWM----------QYSGRTTMMYRSAS-NSPLSKHK
          ++    S    +G W+          +  G  T ++R++S  +PL   K
Subjt:  YLNEVFSVSPKHEYGPWM----------QYSGRTTMMYRSAS-NSPLSKHK

TrEMBL top hitse value%identityAlignment
A0A2N9GWE9 Uncharacterized protein2.7e-1737.5Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        ++F +  FWV F  +P+        E++G+  G  EE D    G GW   LRVR+ LDITK    G +V+    LG  W   +YE+LP +C  CG+IGH 
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSC-SQYLNEVFSVSPKHEYGPWMQYS
         + C S+  N   S     +YGPW++ S
Subjt:  FKSC-SQYLNEVFSVSPKHEYGPWMQYS

A0A6J1BSZ1 uncharacterized protein LOC1110054811.2e-2546.09Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        M+FR V+ WVHF +L +   N +MA RLGNAIG FE+ +     + W   LRVRVR D+ K    GIK+ L G +G CW PI+YE+LP+    CG + H 
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSCSQYLNEVFSVSPKHEYGPWMQYSG
         K CS     V SVS   +YGPW+++ G
Subjt:  FKSCSQYLNEVFSVSPKHEYGPWMQYSG

A0A6J1DU55 uncharacterized protein LOC1110231351.6e-3048.06Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        +EF  V FW+H  +LPM   N +MA RLGNAIG+F + D   +G+ W  SLR+RV +DITK  + GIK+ + G +G CW PI+YE+LP+ C FCGVIGH+
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSC-SQYLNEVFSVSPKHEYGPWMQYSG
           C ++YL          EYGPW+++ G
Subjt:  FKSC-SQYLNEVFSVSPKHEYGPWMQYSG

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-1830.95Show/hide
Query:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN
        ++F  +  WV F +LP+      MA RLGNA+G FEE D  +    W  +LRVRV LDI+K  + GIK+ L G +G  W PI+YE+LP+ C  CG     
Subjt:  MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHN

Query:  FKSCSQYLNEVFSVSPKHEYGPWMQYSGR---TTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSEAKLMDILPAAMIEPQMPPLM
                  + S   KH+YG W++Y G    T    +      L K  N S +   + +   +  V     T   A+     +   P    EP      
Subjt:  FKSCSQYLNEVFSVSPKHEYGPWMQYSGR---TTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSEAKLMDILPAAMIEPQMPPLM

Query:  ENNIAINDGQ
        ++ + I++G+
Subjt:  ENNIAINDGQ

A0A803QQH9 Uncharacterized protein2.7e-1736.57Show/hide
Query:  EFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNF
        + +F  FWV    LP      ++A  LGN IG FE+  + +   GW   LR+RV +D+TK  + G  + LG      W   RYE+LPE C  CG+IGH +
Subjt:  EFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNF

Query:  KSCSQYLNEVFS-VSPKHEYGPWMQYSGRTTMMY
          CS +L ++ +   P  EY P+++ S   T  Y
Subjt:  KSCSQYLNEVFS-VSPKHEYGPWMQYSGRTTMMY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding3.4e-0426.17Show/hide
Query:  WVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYL
        WV    +P + Y+  +   +   +G   + D     +      RV + +++ K  + G  +I G         + YE L +ICS CG+ GH   SC +  
Subjt:  WVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYL

Query:  NEVFSVS
        N V  VS
Subjt:  NEVFSVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCCGATTCGTGACTTTTTGGGTTCATTTTTGCGAGCTTCCGATGGATCTCTATAATTTGTCTATGGCTGAGCGCCTGGGAAATGCGATTGGGAGCTTTGAAGA
GTATGATAAAGGTAACAGAGGATATGGATGGCGGGAGAGCCTTCGTGTTCGGGTACGACTTGACATAACGAAGCTGTTCCAACATGGAATCAAGGTAATTCTGGGTGGGG
GATTGGGGAGTTGTTGGACTCCAATTAGGTATGAGAAACTTCCTGAGATATGTTCTTTCTGTGGTGTTATTGGCCACAACTTCAAAAGCTGCAGTCAGTATCTCAATGAA
GTGTTCTCAGTGTCTCCAAAGCATGAATATGGGCCCTGGATGCAATATTCAGGCAGAACCACGATGATGTACCGATCAGCGAGCAACAGTCCATTATCTAAGCACAAAAA
TATGAGTACGAATTTAGGGGGCGCGGGCATGTCTGTGCAGAATATGATTGTTGACGACATCGAAACTACTTCCCTGACAGCGGTTTCTGAGGCCAAATTGATGGATATCT
TGCCAGCGGCAATGATCGAACCTCAGATGCCACCATTAATGGAGAATAATATCGCAATTAATGATGGCCAAATTAGCGCAACGATGGAGGCTGCAACTAAGACCCACGTG
GCTATGGAGGTGAAAGACGATAAAGGCACGCAAAATGTTGACCATTTCCAATTGGGCTCACAACTTAAAACTACTGGACCATCTGGTAATGCTGACATGGATCTTTCAAA
GAAAAGAGCTGGAGTGGGCCTCACTGGAGGTTCAAAGAAAAGAGCTATAAATGAAGATGACTGTTTGAATTATTCAAATGACAAATCGGTGGAGGCTGAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCCGATTCGTGACTTTTTGGGTTCATTTTTGCGAGCTTCCGATGGATCTCTATAATTTGTCTATGGCTGAGCGCCTGGGAAATGCGATTGGGAGCTTTGAAGA
GTATGATAAAGGTAACAGAGGATATGGATGGCGGGAGAGCCTTCGTGTTCGGGTACGACTTGACATAACGAAGCTGTTCCAACATGGAATCAAGGTAATTCTGGGTGGGG
GATTGGGGAGTTGTTGGACTCCAATTAGGTATGAGAAACTTCCTGAGATATGTTCTTTCTGTGGTGTTATTGGCCACAACTTCAAAAGCTGCAGTCAGTATCTCAATGAA
GTGTTCTCAGTGTCTCCAAAGCATGAATATGGGCCCTGGATGCAATATTCAGGCAGAACCACGATGATGTACCGATCAGCGAGCAACAGTCCATTATCTAAGCACAAAAA
TATGAGTACGAATTTAGGGGGCGCGGGCATGTCTGTGCAGAATATGATTGTTGACGACATCGAAACTACTTCCCTGACAGCGGTTTCTGAGGCCAAATTGATGGATATCT
TGCCAGCGGCAATGATCGAACCTCAGATGCCACCATTAATGGAGAATAATATCGCAATTAATGATGGCCAAATTAGCGCAACGATGGAGGCTGCAACTAAGACCCACGTG
GCTATGGAGGTGAAAGACGATAAAGGCACGCAAAATGTTGACCATTTCCAATTGGGCTCACAACTTAAAACTACTGGACCATCTGGTAATGCTGACATGGATCTTTCAAA
GAAAAGAGCTGGAGTGGGCCTCACTGGAGGTTCAAAGAAAAGAGCTATAAATGAAGATGACTGTTTGAATTATTCAAATGACAAATCGGTGGAGGCTGAATCTTAG
Protein sequenceShow/hide protein sequence
MEFRFVTFWVHFCELPMDLYNLSMAERLGNAIGSFEEYDKGNRGYGWRESLRVRVRLDITKLFQHGIKVILGGGLGSCWTPIRYEKLPEICSFCGVIGHNFKSCSQYLNE
VFSVSPKHEYGPWMQYSGRTTMMYRSASNSPLSKHKNMSTNLGGAGMSVQNMIVDDIETTSLTAVSEAKLMDILPAAMIEPQMPPLMENNIAINDGQISATMEAATKTHV
AMEVKDDKGTQNVDHFQLGSQLKTTGPSGNADMDLSKKRAGVGLTGGSKKRAINEDDCLNYSNDKSVEAES