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Lag0038534 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038534
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr2:19840220..19840753
RNA-Seq ExpressionLag0038534
SyntenyLag0038534
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145141.1 uncharacterized protein LOC111014656 [Momordica charantia]2.8e-3246.01Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MTTN+ E  N++ + AR+LP+TA +DHIRG LQ  +Y+RR   SS  S  S +A E++ +A + ARRH+V  I ++ F+V DG+L   V+L  +TCT RE
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS
        F+Y+++PCSHAIA  + R I  +TLC + Y V+S + +YA+P  P+G         SSS WKS
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS

XP_022147768.1 uncharacterized protein LOC111016623 [Momordica charantia]1.7e-3246.94Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MTTN+AE  N+VL  AR LP+TA +++ R  LQ  +Y+RR   ++  S  +++A +IL ++ E+ARRH ++PI  YEF+V DG    RVNL+++TC+C++
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG
        F+YY++PCSHAIAA   +++  +TLCS  Y +++LI +YA+P  PLG
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG

XP_022154803.1 uncharacterized protein LOC111021969 [Momordica charantia]2.6e-3350.34Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MT+NLAE  N+VL  AR+LPITA  ++ R  LQ  +Y RR   SS  +  +++A  IL++  E+AR H V+PI R+EF+V DG    RVN++++TCTC++
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG
        F YYE+PCSHAIA    R+I  HTLCS  Y +D+LI +Y +P  PLG
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG

XP_022154963.1 uncharacterized protein LOC111022107 [Momordica charantia]7.5e-3346.63Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MTTN+AE  N++ + AR+LP+T  +DHIRG LQ  +Y+RR   SS  S  S +A E++ +A + AR H+V  I  + F+V DG+L G V+L ++TCTCRE
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS
        F+Y+++PCSHAIAA   R I  +TLC + Y V+S +   A+P  P+G         SSS WKS
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS

XP_022154964.1 protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia]2.2e-3243.65Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSS------------------NPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVED
        MTTN+AE  N++ + AR+LP+TA +DHIRG LQ  +Y+RR   SS                  N  + S +A E++ +A + ARRH+V  I ++ F+V D
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSS------------------NPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVED

Query:  GHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS
        G+L G V+L ++TCTCREF+Y+++PCSHAIAA   R I  +TLC + Y V+S + +YA+P  P+G         SSS WKS
Subjt:  GHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS

TrEMBL top hitse value%identityAlignment
A0A6J1CVG8 uncharacterized protein LOC1110146561.4e-3246.01Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MTTN+ E  N++ + AR+LP+TA +DHIRG LQ  +Y+RR   SS  S  S +A E++ +A + ARRH+V  I ++ F+V DG+L   V+L  +TCT RE
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS
        F+Y+++PCSHAIA  + R I  +TLC + Y V+S + +YA+P  P+G         SSS WKS
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS

A0A6J1D278 uncharacterized protein LOC1110166238.0e-3346.94Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MTTN+AE  N+VL  AR LP+TA +++ R  LQ  +Y+RR   ++  S  +++A +IL ++ E+ARRH ++PI  YEF+V DG    RVNL+++TC+C++
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG
        F+YY++PCSHAIAA   +++  +TLCS  Y +++LI +YA+P  PLG
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG

A0A6J1DLB0 uncharacterized protein LOC1110219691.2e-3350.34Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MT+NLAE  N+VL  AR+LPITA  ++ R  LQ  +Y RR   SS  +  +++A  IL++  E+AR H V+PI R+EF+V DG    RVN++++TCTC++
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG
        F YYE+PCSHAIA    R+I  HTLCS  Y +D+LI +Y +P  PLG
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLG

A0A6J1DLQ2 uncharacterized protein LOC1110221073.6e-3346.63Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE
        MTTN+AE  N++ + AR+LP+T  +DHIRG LQ  +Y+RR   SS  S  S +A E++ +A + AR H+V  I  + F+V DG+L G V+L ++TCTCRE
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCRE

Query:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS
        F+Y+++PCSHAIAA   R I  +TLC + Y V+S +   A+P  P+G         SSS WKS
Subjt:  FEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS

A0A6J1DNT3 protein FAR1-RELATED SEQUENCE 4-like1.1e-3243.65Show/hide
Query:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSS------------------NPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVED
        MTTN+AE  N++ + AR+LP+TA +DHIRG LQ  +Y+RR   SS                  N  + S +A E++ +A + ARRH+V  I ++ F+V D
Subjt:  MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSS------------------NPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVED

Query:  GHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS
        G+L G V+L ++TCTCREF+Y+++PCSHAIAA   R I  +TLC + Y V+S + +YA+P  P+G         SSS WKS
Subjt:  GHLGGRVNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase7.8e-0433.33Show/hide
Query:  GRVNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPL
        G V L+  TCTC EF+  + PC HA+A C    I         Y V+    +Y+  ++P+
Subjt:  GRVNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPL

AT1G64260.1 MuDR family transposase1.2e-0425Show/hide
Query:  LQAKYYKRRNKHSSNPSQWSKFATEILEKAEE---KARRHVVKPIARYEFQVEDGHLGGR--VNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLC
        L++ + K  +   S+ ++   +    ++K EE    +  +V+  + R  F+V +        V L+  TCTCR+F+ Y+ PC HA+A      I      
Subjt:  LQAKYYKRRNKHSSNPSQWSKFATEILEKAEE---KARRHVVKPIARYEFQVEDGHLGGR--VNLHARTCTCREFEYYELPCSHAIAACTYRHIEYHTLC

Query:  SKVYHVDSLIDSYAQPYNPL
         + Y V+    +YA  ++P+
Subjt:  SKVYHVDSLIDSYAQPYNPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGGATCATATCAGAGGGTGGCTCCAAGCAAAATACTA
CAAACGCAGGAATAAGCACTCCAGTAACCCGAGCCAGTGGTCGAAGTTTGCTACAGAAATCTTGGAAAAAGCAGAGGAGAAGGCAAGGAGGCACGTGGTCAAACCTATTG
CTCGATATGAGTTTCAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACGTGCACCTGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCAT
GCGATCGCTGCATGCACTTATCGACATATCGAATATCATACTCTTTGTTCCAAAGTCTACCATGTCGACTCTTTGATAGATTCATATGCACAACCATACAACCCCTTGGG
CATGAGTCGGAGTGGAAGAGATCACCTCAGTTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGGGTTGGTCGTCGTCAGACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCACCAATCTTGCGGAGTGCACTAACTCAGTGTTGAAAGATGCACGAGAGCTCCCAATCACCGCATTCATGGATCATATCAGAGGGTGGCTCCAAGCAAAATACTA
CAAACGCAGGAATAAGCACTCCAGTAACCCGAGCCAGTGGTCGAAGTTTGCTACAGAAATCTTGGAAAAAGCAGAGGAGAAGGCAAGGAGGCACGTGGTCAAACCTATTG
CTCGATATGAGTTTCAGGTCGAGGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACGTGCACCTGTCGTGAATTTGAGTATTACGAACTTCCATGCTCCCAT
GCGATCGCTGCATGCACTTATCGACATATCGAATATCATACTCTTTGTTCCAAAGTCTACCATGTCGACTCTTTGATAGATTCATATGCACAACCATACAACCCCTTGGG
CATGAGTCGGAGTGGAAGAGATCACCTCAGTTCGTCGATGTGGAAGTCTTGCCTCCTCGAAGAGTGCCTAGGGTTGGTCGTCGTCAGACGTTGA
Protein sequenceShow/hide protein sequence
MTTNLAECTNSVLKDARELPITAFMDHIRGWLQAKYYKRRNKHSSNPSQWSKFATEILEKAEEKARRHVVKPIARYEFQVEDGHLGGRVNLHARTCTCREFEYYELPCSH
AIAACTYRHIEYHTLCSKVYHVDSLIDSYAQPYNPLGMSRSGRDHLSSSMWKSCLLEECLGLVVVRR