; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038559 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038559
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr2:20476491..20477435
RNA-Seq ExpressionLag0038559
SyntenyLag0038559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]7.9e-1833.64Show/hide
Query:  RRSKEDREGPLIR--FINDLARAK-YREMLRRDFLFERGFGDDLPHFLRAG--IANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSP
        +RSK    G   R  FI+  A  + Y  ++ +  + ERG    +  +      I +  W  FC +P+ V   +VREFYA +    +  A VRG  V +  
Subjt:  RRSKEDREGPLIR--FINDLARAK-YREMLRRDFLFERGFGDDLPHFLRAG--IANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSP

Query:  GAINS-------------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVG
         AIN                       N  +  + IEGAQW+ S  E  +F+ + +K E   WL F+  RLLP+TH S V++D  +LI+AI+   SIDVG
Subjt:  GAINS-------------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVG

Query:  KIISNEILSCWRKK
        K+IS+ IL   R K
Subjt:  KIISNEILSCWRKK

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]3.9e-1728.97Show/hide
Query:  FINDLARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAIN---
        F+++ A+  Y+ +  R   FE GF      F  A  ANLG           W  F   P PVN+ IV+EFY+NI    +   +VRG+S+ ++P AIN   
Subjt:  FINDLARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAIN---

Query:  ----SDQLNAA-------------VWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNE
            +D  N +             + ++ + G +W   + +++T     L      W  F+K +L+PT+H++TVS   ++L+ +IL   +ID+GKII   
Subjt:  ----SDQLNAA-------------VWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNE

Query:  ILSCWRKKVGKCFF
           C +++     F
Subjt:  ILSCWRKKVGKCFF

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.8e-2032.86Show/hide
Query:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y   ++ R    E+GF  D       LP F+   I    W  FC  P+     +VREFYAN+ +  E    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI
                           L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKCFF
         +C  +K G  FF
Subjt:  LSCWRKKVGKCFF

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.8e-2133.8Show/hide
Query:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y   ++ R    E+GF  D       LP F+   I    W  FC  P+     +VREFYAN+ + EE    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI
                           L   +  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKCFF
         +C  +K G  FF
Subjt:  LSCWRKKVGKCFF

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.5e-2131.6Show/hide
Query:  IRFINDLARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS----
        ++F +  A  +Y E ++       ++F+++     + P F+   I    W LFC  P+     +VREFY N+ N ++    +RGV V  S  AIN+    
Subjt:  IRFINDLARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS----

Query:  ----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEIL
                         +L   +  V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++HV L++++L   SI+VG++I  EI 
Subjt:  ----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEIL

Query:  SCWRKKVGKCFF
        +C  +K G  FF
Subjt:  SCWRKKVGKCFF

TrEMBL top hitse value%identityAlignment
A0A061FAJ6 Uncharacterized protein3.8e-1833.64Show/hide
Query:  RRSKEDREGPLIR--FINDLARAK-YREMLRRDFLFERGFGDDLPHFLRAG--IANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSP
        +RSK    G   R  FI+  A  + Y  ++ +  + ERG    +  +      I +  W  FC +P+ V   +VREFYA +    +  A VRG  V +  
Subjt:  RRSKEDREGPLIR--FINDLARAK-YREMLRRDFLFERGFGDDLPHFLRAG--IANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSP

Query:  GAINS-------------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVG
         AIN                       N  +  + IEGAQW+ S  E  +F+ + +K E   WL F+  RLLP+TH S V++D  +LI+AI+   SIDVG
Subjt:  GAINS-------------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVG

Query:  KIISNEILSCWRKK
        K+IS+ IL   R K
Subjt:  KIISNEILSCWRKK

A0A2P5AGA5 Uncharacterized protein (Fragment)1.8e-2032.86Show/hide
Query:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y   ++ R    E+GF  D       LP F+   I    W  FC  P+     +VREFYAN+ +  E    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI
                           L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKCFF
         +C  +K G  FF
Subjt:  LSCWRKKVGKCFF

A0A2P5BCG4 Uncharacterized protein (Fragment)2.8e-2133.8Show/hide
Query:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---
        ++F  + A  +Y   ++ R    E+GF  D       LP F+   I    W  FC  P+     +VREFYAN+ + EE    VRGV V WS  AIN+   
Subjt:  IRFINDLARAKYREMLR-RDFLFERGFGDD-------LPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS---

Query:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI
                           L   +  V   GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+D ++L+ ++L   SI+VG++I +EI
Subjt:  -----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEI

Query:  LSCWRKKVGKCFF
         +C  +K G  FF
Subjt:  LSCWRKKVGKCFF

A0A2P5DAQ2 Uncharacterized protein7.4e-2231.6Show/hide
Query:  IRFINDLARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS----
        ++F +  A  +Y E ++       ++F+++     + P F+   I    W LFC  P+     +VREFY N+ N ++    +RGV V  S  AIN+    
Subjt:  IRFINDLARAKYREMLR-------RDFLFERGFGDDLPHFLRAGIANLGWSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINS----

Query:  ----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEIL
                         +L   +  V I GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++HV L++++L   SI+VG++I  EI 
Subjt:  ----------------DQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNEIL

Query:  SCWRKKVGKCFF
        +C  +K G  FF
Subjt:  SCWRKKVGKCFF

A0A6A2ZUE4 Uncharacterized protein1.9e-1728.97Show/hide
Query:  FINDLARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAIN---
        F+++ A+  Y+ +  R   FE GF      F  A  ANLG           W  F   P PVN+ IV+EFY+NI    +   +VRG+S+ ++P AIN   
Subjt:  FINDLARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLG-----------WSLFCVKPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAIN---

Query:  ----SDQLNAA-------------VWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNE
            +D  N +             + ++ + G +W   + +++T     L      W  F+K +L+PT+H++TVS   ++L+ +IL   +ID+GKII   
Subjt:  ----SDQLNAA-------------VWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILRSLSIDVGKIISNE

Query:  ILSCWRKKVGKCFF
           C +++     F
Subjt:  ILSCWRKKVGKCFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGAGGTGCCTAGACGTCGCCGCATAAAGCGAAAGGCTGGGCGCGTCCAGGTAATTCGAACTGACACTCCTTCGCCACCGTCGTCGGATTCGGAGAAAGAGAGGCC
AGAACGAGAGGAACAAGAAAAGAAGGAAACTGAGGACAGAGAGAGAAGAAGCAAGGAAGACAGAGAAGGACCATTAATCCGCTTCATCAATGATCTTGCTCGAGCAAAAT
ACCGAGAGATGCTGAGAAGGGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCCCATTTCTTAAGAGCAGGAATCGCGAATCTTGGGTGGAGTCTGTTCTGTGTG
AAACCGGACCCAGTGAATTCGAATATTGTTCGAGAATTTTATGCGAATATTGATAATGGAGAGGAATTTCAGGCCATAGTTCGAGGAGTATCTGTTGACTGGAGCCCAGG
GGCTATCAACTCTGATCAGTTAAATGCGGCGGTCTGGGAGGTTGGAATTGAAGGGGCTCAATGGAGGCTATCCAAGACGGAGAAACGCACGTTTCAAGCTGCTTATCTAA
AGAGTGAAGCCAATACTTGGTTAGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCATGATTCAACAGTGTCTCGCGACCATGTGATTCTGATATTCGCTATTCTTCGA
TCCCTGAGTATTGATGTTGGAAAAATTATTTCAAATGAGATTTTAAGTTGCTGGCGCAAGAAGGTGGGGAAATGTTTTTTCGAACACGATCACGATGTTATGCAGCAGGG
CATGAGTGCCCACGGTTCCAGAGGATGTGATTCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGAGGTGCCTAGACGTCGCCGCATAAAGCGAAAGGCTGGGCGCGTCCAGGTAATTCGAACTGACACTCCTTCGCCACCGTCGTCGGATTCGGAGAAAGAGAGGCC
AGAACGAGAGGAACAAGAAAAGAAGGAAACTGAGGACAGAGAGAGAAGAAGCAAGGAAGACAGAGAAGGACCATTAATCCGCTTCATCAATGATCTTGCTCGAGCAAAAT
ACCGAGAGATGCTGAGAAGGGATTTCTTATTCGAAAGAGGGTTTGGTGACGATCTACCCCATTTCTTAAGAGCAGGAATCGCGAATCTTGGGTGGAGTCTGTTCTGTGTG
AAACCGGACCCAGTGAATTCGAATATTGTTCGAGAATTTTATGCGAATATTGATAATGGAGAGGAATTTCAGGCCATAGTTCGAGGAGTATCTGTTGACTGGAGCCCAGG
GGCTATCAACTCTGATCAGTTAAATGCGGCGGTCTGGGAGGTTGGAATTGAAGGGGCTCAATGGAGGCTATCCAAGACGGAGAAACGCACGTTTCAAGCTGCTTATCTAA
AGAGTGAAGCCAATACTTGGTTAGGCTTCATCAAGCTGCGTTTGCTTCCGACTACGCATGATTCAACAGTGTCTCGCGACCATGTGATTCTGATATTCGCTATTCTTCGA
TCCCTGAGTATTGATGTTGGAAAAATTATTTCAAATGAGATTTTAAGTTGCTGGCGCAAGAAGGTGGGGAAATGTTTTTTCGAACACGATCACGATGTTATGCAGCAGGG
CATGAGTGCCCACGGTTCCAGAGGATGTGATTCTGCTTGA
Protein sequenceShow/hide protein sequence
MPEVPRRRRIKRKAGRVQVIRTDTPSPPSSDSEKERPEREEQEKKETEDRERRSKEDREGPLIRFINDLARAKYREMLRRDFLFERGFGDDLPHFLRAGIANLGWSLFCV
KPDPVNSNIVREFYANIDNGEEFQAIVRGVSVDWSPGAINSDQLNAAVWEVGIEGAQWRLSKTEKRTFQAAYLKSEANTWLGFIKLRLLPTTHDSTVSRDHVILIFAILR
SLSIDVGKIISNEILSCWRKKVGKCFFEHDHDVMQQGMSAHGSRGCDSA