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Lag0038565 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038565
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:20598192..20598761
RNA-Seq ExpressionLag0038565
SyntenyLag0038565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7833960.1 reverse transcriptase [Senna tora]7.6e-0835.71Show/hide
Query:  NGDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCA
        NG  V  RLD F+ N+ + SLFPN  V H    KSDH PI   LL SH++     ++P F+ E+ W NH + KE++            A+  ++ L +  
Subjt:  NGDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCA

Query:  TALGKWGSKQNKLLQGNIKKLKHQIQ
         +L     K NK + GNI   K  IQ
Subjt:  TALGKWGSKQNKLLQGNIKKLKHQIQ

KAG2255865.1 hypothetical protein Bca52824_075159 [Brassica carinata]1.7e-0729.32Show/hide
Query:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGKWG
        R+D  + N ++   FP   V    W  SDH P+ L+      N ++  +   F+++  W  +   K+++ +V G     + +Y + + ++QC  AL +W 
Subjt:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGKWG

Query:  SKQNKLLQGNIKKLKHQIQGVYNRPHPLDFGLI
        SKQ    Q  I++LK +IQGVY+ P  +D+ L+
Subjt:  SKQNKLLQGNIKKLKHQIQGVYNRPHPLDFGLI

XP_018832827.1 uncharacterized protein LOC109000415 [Juglans regia]2.2e-0731.09Show/hide
Query:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGKWG
        RLD F+ N  +  LFP   V H   + SDH PI L + G      + R+K  F+FE  W     C+ II RV    G+R++       ++ C   L +W 
Subjt:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGKWG

Query:  SKQNKLLQGNIKKLKHQIQ
              +Q  +KK +  +Q
Subjt:  SKQNKLLQGNIKKLKHQIQ

XP_021859944.1 uncharacterized protein LOC110799052 [Spinacia oleracea]1.7e-0731.85Show/hide
Query:  GDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCAT
        G  V  RLD F+ +S++ SLFP++ V +     SDH PI L+ +  +    + R K +FKFE  W +  EC E +A    W G   E  N  N + +CA 
Subjt:  GDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCAT

Query:  ALGKWGSKQNKLLQGNIKKLKHQIQGVYNRPHPLD
        AL  W +     ++  IK  + +++   +R    D
Subjt:  ALGKWGSKQNKLLQGNIKKLKHQIQGVYNRPHPLD

XP_041011369.1 uncharacterized protein LOC121255158 [Juglans microcarpa x Juglans regia]3.4e-0837.5Show/hide
Query:  GENGDQV-SLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWC-GRRHEAYNLQNCL
        G  GD+V S RLD F+ N+++  LFP   V H   A SDH PI  +  GS     + RRK  F FE  W    +C +II  V  W  G R E+ N++  +
Subjt:  GENGDQV-SLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWC-GRRHEAYNLQNCL

Query:  MQCATALGKWGSKQNKLLQGNIKKLKHQ
        M+  T  GK  +  NK   G+++K K++
Subjt:  MQCATALGKWGSKQNKLLQGNIKKLKHQ

TrEMBL top hitse value%identityAlignment
A0A2I4FMF9 uncharacterized protein LOC1090004151.1e-0731.09Show/hide
Query:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGKWG
        RLD F+ N  +  LFP   V H   + SDH PI L + G      + R+K  F+FE  W     C+ II RV    G+R++       ++ C   L +W 
Subjt:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGKWG

Query:  SKQNKLLQGNIKKLKHQIQ
              +Q  +KK +  +Q
Subjt:  SKQNKLLQGNIKKLKHQIQ

A0A444YR87 Reverse transcriptase domain-containing protein1.4e-0730.71Show/hide
Query:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPS-FKFEKWWTNHGECKEIIARVGGWCG-RRHEAYNLQNCLMQCATALGK
        RLD  +   ++   FP   V H    +SDHCP+ +++ G    N + R +P+ F+FE+ W  + ECKE+I +   W G   H  + L+N    C   L +
Subjt:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPS-FKFEKWWTNHGECKEIIARVGGWCG-RRHEAYNLQNCLMQCATALGK

Query:  WGSKQNKLLQGNIKKLKHQIQGVYNRP
        WG +    L   IK+ +  I+ +   P
Subjt:  WGSKQNKLLQGNIKKLKHQIQGVYNRP

A0A803PJY6 Uncharacterized protein8.2e-0829.77Show/hide
Query:  LDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWW---TNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGK
        +D  I N+ + SLFP H++LH+D+  SDH P+ LNL   H  +S  R    F F+K W    N   C              +   NL   L  C+    +
Subjt:  LDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWW---TNHGECKEIIARVGGWCGRRHEAYNLQNCLMQCATALGK

Query:  WGSKQNKLLQGNIKKLKHQIQGVYNRPHPLD
        W       +   IK+++H ++ V+N   P+D
Subjt:  WGSKQNKLLQGNIKKLKHQIQGVYNRPHPLD

A0A803PUH4 Uncharacterized protein2.2e-0832.03Show/hide
Query:  GENGDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPS-FKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLM
        G   + +  RLD    N  +  LFP   V H D   SDHCPI L+ L  H  N    R  S F FE  W +  +C EI+       G  + A  L++ L 
Subjt:  GENGDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPS-FKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLM

Query:  QCATALGKWGSKQNKLLQGNIKKLKHQI
         C  AL KW   +   ++  +K+ + +I
Subjt:  QCATALGKWGSKQNKLLQGNIKKLKHQI

A0A803QG78 Uncharacterized protein1.4e-0731.78Show/hide
Query:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLM---QCATALG
        RLD    NS +GS F    V H D+  SDH  I   +        Q +R+  F+FEK W +  ECK++I  +  W    H A  +Q  L+    CAT+L 
Subjt:  RLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEAYNLQNCLM---QCATALG

Query:  KWGSKQNKLLQGNIKKLKHQIQGVYNRPH
        KW   +   ++ NI   + ++  + N  H
Subjt:  KWGSKQNKLLQGNIKKLKHQIQGVYNRPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAGTAGCGTTTTGCATTTTCGTATTGGTAGCACTTATACTTGGTGCAATAGGAGAGAATGGTGATCAGGTGAGTTTACGCCTAGATTGTTTTATTGAAAACTC
TAACTATGGTTCATTGTTTCCAAATCACTGGGTTCTGCATCAAGATTGGGCAAAATCGGACCATTGTCCAATTGAATTGAACTTACTTGGGTCGCATTTCAACAATAGTC
AAACAAGACGAAAACCATCCTTTAAATTTGAGAAATGGTGGACGAACCATGGAGAGTGCAAGGAAATTATTGCTCGAGTTGGTGGTTGGTGTGGTAGAAGGCATGAAGCC
TACAATCTACAAAACTGTCTTATGCAGTGTGCGACAGCTTTGGGAAAGTGGGGATCTAAGCAAAATAAGCTATTACAAGGAAATATCAAGAAACTCAAGCATCAAATCCA
AGGAGTCTACAACAGACCTCATCCGCTTGATTTTGGGTTAATCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAGTAGCGTTTTGCATTTTCGTATTGGTAGCACTTATACTTGGTGCAATAGGAGAGAATGGTGATCAGGTGAGTTTACGCCTAGATTGTTTTATTGAAAACTC
TAACTATGGTTCATTGTTTCCAAATCACTGGGTTCTGCATCAAGATTGGGCAAAATCGGACCATTGTCCAATTGAATTGAACTTACTTGGGTCGCATTTCAACAATAGTC
AAACAAGACGAAAACCATCCTTTAAATTTGAGAAATGGTGGACGAACCATGGAGAGTGCAAGGAAATTATTGCTCGAGTTGGTGGTTGGTGTGGTAGAAGGCATGAAGCC
TACAATCTACAAAACTGTCTTATGCAGTGTGCGACAGCTTTGGGAAAGTGGGGATCTAAGCAAAATAAGCTATTACAAGGAAATATCAAGAAACTCAAGCATCAAATCCA
AGGAGTCTACAACAGACCTCATCCGCTTGATTTTGGGTTAATCCACTAA
Protein sequenceShow/hide protein sequence
MIEVAFCIFVLVALILGAIGENGDQVSLRLDCFIENSNYGSLFPNHWVLHQDWAKSDHCPIELNLLGSHFNNSQTRRKPSFKFEKWWTNHGECKEIIARVGGWCGRRHEA
YNLQNCLMQCATALGKWGSKQNKLLQGNIKKLKHQIQGVYNRPHPLDFGLIH