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Lag0038574 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038574
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr2:20665135..20665470
RNA-Seq ExpressionLag0038574
SyntenyLag0038574
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588985.1 Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1446.67Show/hide
Query:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD
        W A+D  L+T+INATLS    ++VV    + +VW  L K +SS SR ++  LK  L TISK S +S   Y+  IKEI +KLANV  +V+DED+L+Y L+ 
Subjt:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD

Query:  FPFDY
         P +Y
Subjt:  FPFDY

KAG7015254.1 hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-1446.67Show/hide
Query:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD
        W A+D  L+T+INATLS    ++VV    + +VW  L K +SS SR ++  LK  L TISK S +S   Y+  IKEI +KLANV  +V+DED+L+Y L+ 
Subjt:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD

Query:  FPFDY
         P +Y
Subjt:  FPFDY

TYK17989.1 uncharacterized protein E5676_scaffold306G002980 [Cucumis melo var. makuwa]5.4e-1344.04Show/hide
Query:  PILQWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLY
        P   W A+D   + LINATLS    ++VV CK +S+VW TLE+ +SS +R +I  LK  L  ISK   +    Y+  IKE+ +KLAN   IV+DED+++Y
Subjt:  PILQWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLY

Query:  MLDDFPFDY
         L+  P +Y
Subjt:  MLDDFPFDY

XP_022158689.1 uncharacterized protein LOC111025150 [Momordica charantia]3.4e-1546.23Show/hide
Query:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD
        +WIA+DH L+TL+NA LS +  ++VV C  + +VW TL K +SS SR ++  LK  L +ISK    S   Y+  IKE+ +KLANV V+VD+ED+L+Y L+
Subjt:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD

Query:  DFPFDY
          P ++
Subjt:  DFPFDY

XP_022159298.1 uncharacterized protein LOC111025709 [Momordica charantia]3.4e-1546.67Show/hide
Query:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD
        WIA+DH L+TL+NATLS +  +++V C  + +VW TL K +SS SR ++  LK  L +ISK   +S   Y+  IKE+ +KLANV V+VD+ED+L+Y L+ 
Subjt:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD

Query:  FPFDY
         P ++
Subjt:  FPFDY

TrEMBL top hitse value%identityAlignment
A0A2N9GJJ1 Retrotran_gag_3 domain-containing protein2.6e-1347.17Show/hide
Query:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD
        QWI++D  L+TLIN+TLS T  S VV    A  VW  LEK ++S SR +I  LK  LH I K ST S   YL  IKE+ ++L  V V VD+E++L  +L 
Subjt:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD

Query:  DFPFDY
          P++Y
Subjt:  DFPFDY

A0A5B7C9B1 Retrotran_gag_3 domain-containing protein2.4e-1447.17Show/hide
Query:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD
        +WI  D  L+TLINATLS +  ++V+    + EVW  LE+ FSS SRL+I +LK  LHT+SK  T S   Y+  IK+  + LA V VI++DED+L++ L+
Subjt:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD

Query:  DFPFDY
          P DY
Subjt:  DFPFDY

A0A5D3D3T6 Retrotran_gag_3 domain-containing protein2.6e-1344.04Show/hide
Query:  PILQWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLY
        P   W A+D   + LINATLS    ++VV CK +S+VW TLE+ +SS +R +I  LK  L  ISK   +    Y+  IKE+ +KLAN   IV+DED+++Y
Subjt:  PILQWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLY

Query:  MLDDFPFDY
         L+  P +Y
Subjt:  MLDDFPFDY

A0A6J1DYF1 uncharacterized protein LOC1110257091.6e-1546.67Show/hide
Query:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD
        WIA+DH L+TL+NATLS +  +++V C  + +VW TL K +SS SR ++  LK  L +ISK   +S   Y+  IKE+ +KLANV V+VD+ED+L+Y L+ 
Subjt:  WIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDD

Query:  FPFDY
         P ++
Subjt:  FPFDY

A0A6J1E049 uncharacterized protein LOC1110251501.6e-1546.23Show/hide
Query:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD
        +WIA+DH L+TL+NA LS +  ++VV C  + +VW TL K +SS SR ++  LK  L +ISK    S   Y+  IKE+ +KLANV V+VD+ED+L+Y L+
Subjt:  QWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLD

Query:  DFPFDY
          P ++
Subjt:  DFPFDY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCAATACTGCAATGGATTGCTCAGGATCATGTATTGATCACTTTGATCAATGCTACGCTGTCCAAAACTGTCTTCTCTTTTGTCGTCGATTGTAAAATAGCAAG
TGAGGTATGGTTAACTCTTGAGAAATGCTTCTCTTCTTTAAGTAGATTGCACATACAAGAACTCAAATATGTTCTTCACACTATCTCCAAATCCTCTACTAAATCGACTA
AGGATTATCTTCTATGCATCAAGGAGATTCTTAATAAACTAGCAAATGTTGTTGTCATTGTTGATGATGAAGATGTTCTGTTGTACATGCTTGATGACTTTCCTTTTGAT
TATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCCAATACTGCAATGGATTGCTCAGGATCATGTATTGATCACTTTGATCAATGCTACGCTGTCCAAAACTGTCTTCTCTTTTGTCGTCGATTGTAAAATAGCAAG
TGAGGTATGGTTAACTCTTGAGAAATGCTTCTCTTCTTTAAGTAGATTGCACATACAAGAACTCAAATATGTTCTTCACACTATCTCCAAATCCTCTACTAAATCGACTA
AGGATTATCTTCTATGCATCAAGGAGATTCTTAATAAACTAGCAAATGTTGTTGTCATTGTTGATGATGAAGATGTTCTGTTGTACATGCTTGATGACTTTCCTTTTGAT
TATTAA
Protein sequenceShow/hide protein sequence
MDPILQWIAQDHVLITLINATLSKTVFSFVVDCKIASEVWLTLEKCFSSLSRLHIQELKYVLHTISKSSTKSTKDYLLCIKEILNKLANVVVIVDDEDVLLYMLDDFPFD
Y