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Lag0038596 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038596
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSNARE associated Golgi protein family
Genome locationchr2:21101603..21102853
RNA-Seq ExpressionLag0038596
SyntenyLag0038596
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR045014 - Transmembrane protein 41A/B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461958.1 PREDICTED: uncharacterized membrane protein At4g09580-like [Cucumis melo]9.9e-7195.89Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNV +RDEEKLKEDDSPTAKKPKFERFPLTKWELA ALGIFL+CSTGL+CVYLTMPSAEYQSVKLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

XP_022926209.1 uncharacterized membrane protein At4g09580-like [Cucurbita moschata]1.1e-6994.52Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNVAVRDEEKLKEDDSPTAKKPK+ERFPLTKWELA AL IFLVC TGLVCVYLTMPSAEYQS+KLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TY+FMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGA SCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

XP_022981576.1 uncharacterized membrane protein At4g09580-like [Cucurbita maxima]2.4e-6993.84Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNVAVRDEEKLKEDDSPTAKKPK+ERFPLT+WELA AL IFLVC TGLVCVYLTMPSAEYQS+KLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TY+FMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGA SCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

XP_031745009.1 uncharacterized membrane protein At4g09580 [Cucumis sativus]4.5e-7196.58Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNV +RDEEKLKEDDSPTAKKPKFERFPLTKWELA ALGIFL+CSTGLVCVYLTMPSAEYQSVKLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

XP_038900052.1 uncharacterized membrane protein At4g09580 [Benincasa hispida]4.5e-7197.26Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNV VRDEEKLKEDDSPTAKKPKFERFPLTKWELA ALGIFLVCS GLVCVYLTMPSAEYQSVKLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

TrEMBL top hitse value%identityAlignment
A0A0A0K623 Uncharacterized protein2.2e-7196.58Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNV +RDEEKLKEDDSPTAKKPKFERFPLTKWELA ALGIFL+CSTGLVCVYLTMPSAEYQSVKLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

A0A1S4E3J1 uncharacterized membrane protein At4g09580-like4.8e-7195.89Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNV +RDEEKLKEDDSPTAKKPKFERFPLTKWELA ALGIFL+CSTGL+CVYLTMPSAEYQSVKLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

A0A5A7U377 Putative membrane protein4.8e-7195.89Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNV +RDEEKLKEDDSPTAKKPKFERFPLTKWELA ALGIFL+CSTGL+CVYLTMPSAEYQSVKLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

A0A6J1EEH6 uncharacterized membrane protein At4g09580-like5.3e-7094.52Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNVAVRDEEKLKEDDSPTAKKPK+ERFPLTKWELA AL IFLVC TGLVCVYLTMPSAEYQS+KLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TY+FMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGA SCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

A0A6J1IUC8 uncharacterized membrane protein At4g09580-like1.2e-6993.84Show/hide
Query:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS
        MAASRNVAVRDEEKLKEDDSPTAKKPK+ERFPLT+WELA AL IFLVC TGLVCVYLTMPSAEYQS+KLPRTLSDLR+LKDLFANYAKDHPAQFILGYCS
Subjt:  MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCS

Query:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        TY+FMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGA SCFF
Subjt:  TYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

SwissProt top hitse value%identityAlignment
Q08D99 Transmembrane protein 41A5.4e-1136.67Show/hide
Query:  LGIFLVCSTGLVCVYL---------TMPSAEY---QSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRG
        LG+ LV +     +YL         T+ SAE    +S+  P  L++LR L ++   Y K+H     L +CS Y++ Q+F IPG+ F+++LAGALFG   G
Subjt:  LGIFLVCSTGLVCVYL---------TMPSAEY---QSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRG

Query:  LLLVVFNATAGASSCFFCLS
        LLL     + GA+ C+   S
Subjt:  LLLVVFNATAGASSCFFCLS

Q6NV38 Transmembrane protein 41A-B1.6e-1034.88Show/hide
Query:  PSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCF
        P  +   +K P  L +LR L +L   Y  +H     + +CS Y++ Q+F IPG+ F+++L+GALFG + GL++     T G+++C+
Subjt:  PSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCF

Q8L586 Uncharacterized membrane protein At4g095801.2e-4761.96Show/hide
Query:  MAASRNVA--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLF
        MAA RN+         V+DEE          L  DDSPT K+ K ERFPL++WE A    +FLV +TGL C+YLTMP+AEY  +K+PRT+SDLR+LK+  
Subjt:  MAASRNVA--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLF

Query:  ANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
         +YA ++ A+FILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFF
Subjt:  ANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

Q8MXN7 Transmembrane protein 41 homolog1.2e-1035.09Show/hide
Query:  PLTKWELATALGIFLVCSTGLVCVYLTMPS---AEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIR
        PL  W L    G+ +   + +V ++L  PS      Q ++LP+   D+++L D+ + Y  D+    I  +   Y F+Q F IPG++F+S L+G LFG+  
Subjt:  PLTKWELATALGIFLVCSTGLVCVYLTMPS---AEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIR

Query:  GLLLVVFNATAGAS
        G  LV F AT GA+
Subjt:  GLLLVVFNATAGAS

Q9D8U2 Transmembrane protein 41A2.0e-1035.83Show/hide
Query:  LGIFLV---CSTGLVCVYLTMP---------SAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRG
        LG+ LV   C+  L  +   +P           E +S+  P  L++LR L ++   Y K+H A   L +CS Y++ Q F IPG+ F+++LAGALFG   G
Subjt:  LGIFLV---CSTGLVCVYLTMP---------SAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRG

Query:  LLLVVFNATAGASSCFFCLS
        LLL     + GA+ C+   S
Subjt:  LLLVVFNATAGASSCFFCLS

Arabidopsis top hitse value%identityAlignment
AT1G71940.1 SNARE associated Golgi protein family6.4e-5266.67Show/hide
Query:  ASRNVAVRDEEK---LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYC
        A   +  RDEE      +DDSP+ K+ K +RFPL++WELA +LG+FLV S+GL C+Y+TMP+AE+  +KLPR+L+DLR+LKD  ANYA ++PAQF+LGYC
Subjt:  ASRNVAVRDEEK---LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYC

Query:  STYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        +TYIFMQTFMIPGTIFMSLLAGALFGV +G++LVVFNATAGA+SCFF
Subjt:  STYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

AT1G71940.2 SNARE associated Golgi protein family6.4e-5266.67Show/hide
Query:  ASRNVAVRDEEK---LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYC
        A   +  RDEE      +DDSP+ K+ K +RFPL++WELA +LG+FLV S+GL C+Y+TMP+AE+  +KLPR+L+DLR+LKD  ANYA ++PAQF+LGYC
Subjt:  ASRNVAVRDEEK---LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYC

Query:  STYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
        +TYIFMQTFMIPGTIFMSLLAGALFGV +G++LVVFNATAGA+SCFF
Subjt:  STYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

AT4G09580.1 SNARE associated Golgi protein family8.7e-4961.96Show/hide
Query:  MAASRNVA--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLF
        MAA RN+         V+DEE          L  DDSPT K+ K ERFPL++WE A    +FLV +TGL C+YLTMP+AEY  +K+PRT+SDLR+LK+  
Subjt:  MAASRNVA--------VRDEEK---------LKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLF

Query:  ANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF
         +YA ++ A+FILGYCSTYIFMQTFMIPGTIFMSLLAGALFGV+RG +LVV NATAGA SCFF
Subjt:  ANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFF

AT4G17790.1 SNARE associated Golgi protein family6.1e-3458.62Show/hide
Query:  FPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGL
        + L+ WE+  A G+ L    GLVCVYLTMP ++Y  +KLPR L DL++L+D    Y  D+  Q ++GYC  Y+FMQTFMIPGT+FMSLLAGALFGV++G+
Subjt:  FPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVIRGL

Query:  LLVVFNATAGASSCFF
         LVV  ATAGASSC+F
Subjt:  LLVVFNATAGASSCFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTTCGAGGAATGTCGCGGTCAGGGATGAGGAGAAGCTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGA
GCTAGCGACTGCTCTTGGCATATTCCTTGTGTGCTCTACTGGCCTCGTGTGTGTGTACTTGACGATGCCCTCTGCAGAGTACCAGAGTGTTAAGCTTCCGAGGACGCTTT
CGGATCTTCGGATGCTCAAGGATCTCTTTGCAAATTATGCCAAAGATCATCCAGCACAATTCATTCTAGGTTATTGCTCCACTTACATATTCATGCAAACATTCATGATT
CCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTAATCAGAGGCCTTCTGTTAGTTGTCTTTAATGCAACAGCTGGTGCATCCTCTTGCTTTTTCTG
TCTAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTTCGAGGAATGTCGCGGTCAGGGATGAGGAGAAGCTGAAGGAAGATGACTCTCCGACGGCCAAGAAGCCTAAATTTGAGAGGTTTCCATTGACGAAGTGGGA
GCTAGCGACTGCTCTTGGCATATTCCTTGTGTGCTCTACTGGCCTCGTGTGTGTGTACTTGACGATGCCCTCTGCAGAGTACCAGAGTGTTAAGCTTCCGAGGACGCTTT
CGGATCTTCGGATGCTCAAGGATCTCTTTGCAAATTATGCCAAAGATCATCCAGCACAATTCATTCTAGGTTATTGCTCCACTTACATATTCATGCAAACATTCATGATT
CCTGGAACAATTTTCATGTCATTGCTTGCTGGAGCTCTATTTGGTGTAATCAGAGGCCTTCTGTTAGTTGTCTTTAATGCAACAGCTGGTGCATCCTCTTGCTTTTTCTG
TCTAAGTTGA
Protein sequenceShow/hide protein sequence
MAASRNVAVRDEEKLKEDDSPTAKKPKFERFPLTKWELATALGIFLVCSTGLVCVYLTMPSAEYQSVKLPRTLSDLRMLKDLFANYAKDHPAQFILGYCSTYIFMQTFMI
PGTIFMSLLAGALFGVIRGLLLVVFNATAGASSCFFCLS