| GenBank top hits | e value | %identity | Alignment |
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| KAA0032431.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa] | 6.7e-11 | 30.03 | Show/hide |
Query: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
SWYQS RFCRL Y + + F ++ S P R+ MPP RG RG+G G V E +P PV H A +E F Q P
Subjt: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
Query: APPAP-----------PAQAQTVTLTLEALQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVG-----K
APPAP P Q V L A L P + D L+ H L L + C + C + D G
Subjt: APPAP-----------PAQAQTVTLTLEALQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVG-----K
Query: LALILSGLWTPVHERRKEKLCCWFLSEFKSFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKR
+L G V + ++L F ++F S ++ ++ EFL L+QGD +VE+Y+ +F LS FA +M+ TEA + F+ GLR D++
Subjt: LALILSGLWTPVHERRKEKLCCWFLSEFKSFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKR
Query: VVGALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
+V A PA +A ALR A+ + + + + A +SGQKRK
Subjt: VVGALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
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| KAA0036204.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-10 | 31.47 | Show/hide |
Query: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
WYQS RFCRLAY + + F ++ S P R+ MPP RG R RGRG G V E DP PV H A +E F Q P
Subjt: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
Query: APPAP-------PAQAQT-VTLTLEALQNQLDS----LGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALI
APPAP PA A V + + + NQL + L D + G L L L + C + C + D G
Subjt: APPAP-------PAQAQT-VTLTLEALQNQLDS----LGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALI
Query: LSGLWTPVHERRKEKLCCWFLSEFK-SFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVG
+ W + +FK SF K L EFL L+QGD +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V
Subjt: LSGLWTPVHERRKEKLCCWFLSEFK-SFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVG
Query: ALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
A PA +A ALR A+ + + + SGQKRK
Subjt: ALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
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| KAA0037291.1 pol protein [Cucumis melo var. makuwa] | 3.0e-11 | 30 | Show/hide |
Query: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVP---LEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEA
WYQS RFCRLAY + + F ++ S P R+ MPP RG RGRG G V EQ P A PAP P Q V L A
Subjt: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVP---LEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEA
Query: LQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWTPVHERRKEKLCCWFLSEFK-SFLV
L P + L + L + C + C + D G + W + +FK SF
Subjt: LQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWTPVHERRKEKLCCWFLSEFK-SFLV
Query: KRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLVAKE
K L EFL L+QGD +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V A PA +A ALR A+ + + + +
Subjt: KRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLVAKE
Query: LEFSSGQKRK
+SGQKRK
Subjt: LEFSSGQKRK
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| KAA0053412.1 pol protein [Cucumis melo var. makuwa] | 5.5e-13 | 30.03 | Show/hide |
Query: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEAL
+WYQS RFCRL Y + + F ++ S P R+ +P RG RD RGRG G V Q ++P Q P AP A L A+
Subjt: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEAL
Query: QNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWT-----PVHERRKEKLCCWFLSEFKS
+ + L E + P P + +P V VV D + L LS L T E +K + + L++ +
Subjt: QNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWT-----PVHERRKEKLCCWFLSEFKS
Query: FLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLV
+ + +L G EFL L+QGD +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V A PA +A ALR A+ + + + +
Subjt: FLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLV
Query: AKELEFSSGQKRK
A +SGQKRK
Subjt: AKELEFSSGQKRK
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| XP_023543569.1 uncharacterized protein LOC111803417 [Cucurbita pepo subsp. pepo] | 5.2e-11 | 38.73 | Show/hide |
Query: ERRKEKLCCWFLSEFKSFLVKRSRTLLTGFYPC----RNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPAD
E E+ CW + R + +YP N FL LKQG+ +VEEYEL+F RLSRFAL+ +DTE K+T FILGLR +++ V A+
Subjt: ERRKEKLCCWFLSEFKSFLVKRSRTLLTGFYPC----RNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPAD
Query: YAVALRAAMFMGMSAASATLVAKELEFSSGQKRKFSRSFSKS
YA AL AA + A+ ++ + S KRKF + +KS
Subjt: YAVALRAAMFMGMSAASATLVAKELEFSSGQKRKFSRSFSKS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SL46 Reverse transcriptase | 5.6e-11 | 28.57 | Show/hide |
Query: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMP--PCFRGLGRDRGRGRGYV-----PLEQ-VDP--PVGHQ--AGIEPEF-----------QMP
+WYQS RFC+L Y + + F ++ P R+ MP RG DRGRG G+V P+ Q DP PV H +E F Q P
Subjt: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMP--PCFRGLGRDRGRGRGYV-----PLEQ-VDP--PVGHQ--AGIEPEF-----------QMP
Query: APPAPPAQAQTVTLTLEALQNQLDSLGDSEPESSRAD-RGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWTPVHER
APPAP V + + + +QL + + + + L L L + C + CV + D G + W
Subjt: APPAPPAQAQTVTLTLEALQNQLDSLGDSEPESSRAD-RGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWTPVHER
Query: RKEKLCCWFLSEFK-SFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVAL
+ +FK SF K L EFL L+Q D +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V A P +A AL
Subjt: RKEKLCCWFLSEFK-SFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVAL
Query: RAAMFMGMSAASATLVAKELEFSSGQKRK
A+ + + + + +SGQKRK
Subjt: RAAMFMGMSAASATLVAKELEFSSGQKRK
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| A0A5A7SSA3 Reverse transcriptase | 3.3e-11 | 30.03 | Show/hide |
Query: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
SWYQS RFCRL Y + + F ++ S P R+ MPP RG RG+G G V E +P PV H A +E F Q P
Subjt: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
Query: APPAP-----------PAQAQTVTLTLEALQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVG-----K
APPAP P Q V L A L P + D L+ H L L + C + C + D G
Subjt: APPAP-----------PAQAQTVTLTLEALQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVG-----K
Query: LALILSGLWTPVHERRKEKLCCWFLSEFKSFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKR
+L G V + ++L F ++F S ++ ++ EFL L+QGD +VE+Y+ +F LS FA +M+ TEA + F+ GLR D++
Subjt: LALILSGLWTPVHERRKEKLCCWFLSEFKSFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKR
Query: VVGALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
+V A PA +A ALR A+ + + + + A +SGQKRK
Subjt: VVGALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
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| A0A5A7SY46 Ty3-gypsy retrotransposon protein | 5.6e-11 | 31.47 | Show/hide |
Query: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
WYQS RFCRLAY + + F ++ S P R+ MPP RG R RGRG G V E DP PV H A +E F Q P
Subjt: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLE------QVDP--PVGHQ--AGIEPEF----------QMP
Query: APPAP-------PAQAQT-VTLTLEALQNQLDS----LGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALI
APPAP PA A V + + + NQL + L D + G L L L + C + C + D G
Subjt: APPAP-------PAQAQT-VTLTLEALQNQLDS----LGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALI
Query: LSGLWTPVHERRKEKLCCWFLSEFK-SFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVG
+ W + +FK SF K L EFL L+QGD +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V
Subjt: LSGLWTPVHERRKEKLCCWFLSEFK-SFLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVG
Query: ALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
A PA +A ALR A+ + + + SGQKRK
Subjt: ALGPADYAVALRAAMFMGMSAASATLVAKELEFSSGQKRK
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| A0A5A7T6R9 Reverse transcriptase | 1.5e-11 | 30 | Show/hide |
Query: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVP---LEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEA
WYQS RFCRLAY + + F ++ S P R+ MPP RG RGRG G V EQ P A PAP P Q V L A
Subjt: WYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPP---CFRGLGRDRGRGRGYVP---LEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEA
Query: LQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWTPVHERRKEKLCCWFLSEFK-SFLV
L P + L + L + C + C + D G + W + +FK SF
Subjt: LQNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWTPVHERRKEKLCCWFLSEFK-SFLV
Query: KRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLVAKE
K L EFL L+QGD +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V A PA +A ALR A+ + + + +
Subjt: KRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLVAKE
Query: LEFSSGQKRK
+SGQKRK
Subjt: LEFSSGQKRK
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| A0A5A7UCD5 Reverse transcriptase | 2.7e-13 | 30.03 | Show/hide |
Query: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEAL
+WYQS RFCRL Y + + F ++ S P R+ +P RG RD RGRG G V Q ++P Q P AP A L A+
Subjt: SWYQSPVSRFCRLAYIIRIRFPHSQVQVSTPFHRQTMPPCFRGLGRD----RGRGRGYVPLEQVDPPVGHQAGIEPEFQMPAPPAPPAQAQTVTLTLEAL
Query: QNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWT-----PVHERRKEKLCCWFLSEFKS
+ + L E + P P + +P V VV D + L LS L T E +K + + L++ +
Subjt: QNQLDSLGDSEPESSRADRGLQRRLGGHDGGDLPLHGVPRGSTSPMCRVHAEGGCVDVVTDDVGKLALILSGLWT-----PVHERRKEKLCCWFLSEFKS
Query: FLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLV
+ + +L G EFL L+QGD +VE+Y+ +F LSRFA +M+ TEA + F+ GLR D++ +V A PA +A ALR A+ + + + +
Subjt: FLVKRSRTLLTGFYPCRNEAEFLALKQGDKSVEEYELKFMRLSRFALKMVDTEAKKTKMFILGLRDDVKRVVGALGPADYAVALRAAMFMGMSAASATLV
Query: AKELEFSSGQKRK
A +SGQKRK
Subjt: AKELEFSSGQKRK
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