CuGenDBv2

Gene ID	Lag0038631
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Ribonuclease H
Genome location	chr2:21896086..21901803
RNA-Seq Expression	Lag0038631
Synteny	Lag0038631
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0071897 - DNA biosynthetic process (biological process) GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process) GO:0005634 - nucleus (cellular component) GO:0030430 - host cell cytoplasm (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003887 - DNA-directed DNA polymerase activity (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR021109 - Aspartic peptidase domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]

2.3e-106

68.52

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Query:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLT +G+CYTP+ LLK        K KE              K K K+ ED+  +  E I VK++  K+   EE+IQEF KLVKQS+YKV EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
        KI +L+ LL+S+ HR TLL+ L Q +V Q ITVDNL N+VGNITASSS+TFTD+E+ PEGT HTK LHI+VKCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM
        PVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFDITFQVM+I S YSFLLGR WIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM

Query:  LYIEA
         Y+EA
Subjt:  LYIEA

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]

3.6e-107

68.42

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Query:  GGLTRSGKCYTPEDLL-----------KPKGKEKWKVKIIEDIKKKTE----------EPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLTR+G+CYTP+ LL           K K  EK K K+ ED K K +          E I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLL-----------KPKGKEKWKVKIIEDIKKKTE----------EPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
         I +L+ LL+S+ H+  LL+ L Q +V Q ITVDNL N+VGNITASSS++FTD+E+ PEGT HTK LHI+VKCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM
        PVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFDITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSR +SM
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM

Query:  LYIE
         Y+E
Subjt:  LYIE

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]

1.2e-102

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Query:  GGLTRSGKCYTPEDLLKPKGK---EKWKVKIIEDIKKKTEEPIAVK---NLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHR
        GGLTR+G+CYTP+ LLK   +   EK K K  E  K+K EE    K   + DV     EE+ QEF KLVKQ++YKV+EQLGRTPAKI +L+ LL+S+ HR
Subjt:  GGLTRSGKCYTPEDLLKPKGK---EKWKVKIIEDIKKKTEEPIAVK---NLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHR

Query:  KTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVR
          LL+ L Q +V Q ITVDNL N+VGNI ASS +TFTD+E+ PEGT HTK LHI+VKCKNF++AKVLV NGSSLNIMP+STLEKLPVDMSH+RPST+IVR
Subjt:  KTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVR

Query:  AFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEA
        AFDGAR+ VVGDIE+PIQIG CTFDITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM Y+EA
Subjt:  AFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEA

XP_022155744.1 uncharacterized protein LOC111022791 [Momordica charantia]

2.6e-105

67.32

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Query:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
        KI +L+ LL+S+ HR  LL+ L Q +V Q ITVDNL N+VGNI  SSS+TFT++E+ PEGT HTK LHI+VKCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM
        PVDMSH+RPST+IVRAFDGARS  VGDIE+PIQIGPCTFD TFQVM+I SAYSFLLGRP IHSAG VPS+LHQK+KF +D+KLVIIS QEDILVSRL+SM
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM

Query:  LYIEAT
         Y+EAT
Subjt:  LYIEAT

XP_022158986.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]

1.5e-97

66.08

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Query:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E I VK++  K+P SEE+ QE  KLVKQS+YKV+EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
        KI +L+ LL+S+ HR  LL+ L Q +V Q ITVDNL N+VGNI+ +SS+TFTD+E+ PEGT HTK LHI++KCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKL
        PVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFDITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+ +
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CNY7 Ribonuclease H

1.1e-106

68.52

Show/hide

Query:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLT +G+CYTP+ LLK        K KE              K K K+ ED+  +  E I VK++  K+   EE+IQEF KLVKQS+YKV EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
        KI +L+ LL+S+ HR TLL+ L Q +V Q ITVDNL N+VGNITASSS+TFTD+E+ PEGT HTK LHI+VKCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM
        PVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFDITFQVM+I S YSFLLGR WIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM

Query:  LYIEA
         Y+EA
Subjt:  LYIEA

A0A6J1D099 Ribonuclease H

1.7e-107

68.42

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Query:  GGLTRSGKCYTPEDLL-----------KPKGKEKWKVKIIEDIKKKTE----------EPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLTR+G+CYTP+ LL           K K  EK K K+ ED K K +          E I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLL-----------KPKGKEKWKVKIIEDIKKKTE----------EPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
         I +L+ LL+S+ H+  LL+ L Q +V Q ITVDNL N+VGNITASSS++FTD+E+ PEGT HTK LHI+VKCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM
        PVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFDITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSR +SM
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM

Query:  LYIE
         Y+E
Subjt:  LYIE

A0A6J1D7C7 Ribonuclease H

5.8e-103

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Query:  GGLTRSGKCYTPEDLLKPKGK---EKWKVKIIEDIKKKTEEPIAVK---NLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHR
        GGLTR+G+CYTP+ LLK   +   EK K K  E  K+K EE    K   + DV     EE+ QEF KLVKQ++YKV+EQLGRTPAKI +L+ LL+S+ HR
Subjt:  GGLTRSGKCYTPEDLLKPKGK---EKWKVKIIEDIKKKTEEPIAVK---NLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLLASDTHR

Query:  KTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVR
          LL+ L Q +V Q ITVDNL N+VGNI ASS +TFTD+E+ PEGT HTK LHI+VKCKNF++AKVLV NGSSLNIMP+STLEKLPVDMSH+RPST+IVR
Subjt:  KTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVR

Query:  AFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEA
        AFDGAR+ VVGDIE+PIQIG CTFDITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+KLVIIS QEDILVSRL+SM Y+EA
Subjt:  AFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEA

A0A6J1DR66 uncharacterized protein LOC111022791

1.2e-105

67.32

Show/hide

Query:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E I VK++  K+P SEE+ QEF KLVKQS+YKV+EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
        KI +L+ LL+S+ HR  LL+ L Q +V Q ITVDNL N+VGNI  SSS+TFT++E+ PEGT HTK LHI+VKCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM
        PVDMSH+RPST+IVRAFDGARS  VGDIE+PIQIGPCTFD TFQVM+I SAYSFLLGRP IHSAG VPS+LHQK+KF +D+KLVIIS QEDILVSRL+SM
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSM

Query:  LYIEAT
         Y+EAT
Subjt:  LYIEAT

A0A6J1E2J7 Ribonuclease H

7.3e-98

66.08

Show/hide

Query:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA
        GGLTR+G+CYTP+ LLK        K KE              K K K+ ED+  +  E I VK++  K+P SEE+ QE  KLVKQS+YKV+EQLGRTPA
Subjt:  GGLTRSGKCYTPEDLLK-------PKGKE--------------KWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPA

Query:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL
        KI +L+ LL+S+ HR  LL+ L Q +V Q ITVDNL N+VGNI+ +SS+TFTD+E+ PEGT HTK LHI++KCKNF++AKVLVDNGSSLNIMP+STLEKL
Subjt:  KIFVLAFLLASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKL

Query:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKL
        PVDMSH+RPST+IVRAFDGARS VVGDIE+PIQIGPCTFDITFQVM+I SAYSFLLGRPWIHSAG VPS+LHQK+KF VD+ +
Subjt:  PVDMSHVRPSTMIVRAFDGARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKL

SwissProt top hits

e value

%identity

Alignment

Q9LVS3 Pentatricopeptide repeat-containing protein At5g47360

1.6e-33

43.04

Show/hide

Query:  LSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVGPQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGC
        L+ +S+A   Y  LQ    N+EK LA+   +LDS C++EVL +C     Q GLRFFIW G   ++RHS++MY+  C+++ I   P L+  VIE YR+E C
Subjt:  LSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVGPQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGC

Query:  LVDIRMFKVILNLCKEAKLAKESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLA
         V+++  +++L LC +A LA E+L +L K PEF++ ADT  YNL+IR      +L++A
Subjt:  LVDIRMFKVILNLCKEAKLAKESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLA

Arabidopsis top hits

e value

%identity

Alignment

AT5G47360.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.1e-34

43.04

Show/hide

Query:  LSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVGPQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGC
        L+ +S+A   Y  LQ    N+EK LA+   +LDS C++EVL +C     Q GLRFFIW G   ++RHS++MY+  C+++ I   P L+  VIE YR+E C
Subjt:  LSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVGPQLNYRHSSFMYSTTCEMIGINRSPCLLFNVIEDYRREGC

Query:  LVDIRMFKVILNLCKEAKLAKESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLA
         V+++  +++L LC +A LA E+L +L K PEF++ ADT  YNL+IR      +L++A
Subjt:  LVDIRMFKVILNLCKEAKLAKESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGAAATTTGTTATCTGTTTCAGAGTAAGTGCTCACACGATTGCATTATGATTTACTCTGTGATTGTTGTGTTTTGTTTACTTGATTTCGAATCTTTTTGCTGCAA
TGTGAAAGAACCTGAGCTAAGTATAATCTCTTCTGCTGGTCTATTCTACAACCATCTGCAGAAAAACAATGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGT
TGGATTCTAGGTGTGTCGACGAAGTGTTGCATAAATGTTCCTTCGAACTATCGCAAATGGGTCTTAGATTTTTTATATGGGTTGGTCCACAACTTAATTATAGGCATAGT
TCTTTTATGTACAGTACAACTTGTGAAATGATTGGAATTAATCGAAGCCCATGCTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAG
GATGTTTAAGGTTATTTTAAATTTGTGTAAAGAAGCCAAGCTTGCCAAAGAGTCTTTGTCGATATTAGGGAAAGTGCCTGAATTTCATTTGCAGGCTGACACTACAATGT
ATAATCTGATTATAAGGTGGCTTGTGGTGAGCAAAGAATTGTCTCTTGCAAGTTTCACTGAATTTACTGAAGAATCAAAAGCTGATAAGCTGCTGGGTGGTGGAATAGGC
ATTAGAAGCAAAGTTGGGAGCCAAGACACTCAAATCACTACTTTGCTTCAGACGTCTTTTAATGACGGAGGTCTAACACGAAGCGGGAAGTGCTATACACCGGAAGACCT
ATTGAAACCCAAGGGTAAAGAAAAATGGAAAGTCAAGATCATTGAAGATATCAAGAAAAAGACAGAAGAGCCCATTGCAGTGAAAAACCTGGATGTTAAAAAACCAACAT
CTGAAGAGGACATCCAAGAATTTTTTAAGTTGGTTAAACAAAGTGATTATAAAGTGGTTGAACAGTTAGGTCGAACCCCTGCAAAGATTTTCGTATTGGCTTTCTTATTA
GCTTCAGATACGCATCGTAAGACTTTGTTGGACATATTGAATCAAACTTATGTTCCGCAGGTTATTACGGTGGACAACTTGGATAACATTGTTGGAAACATAACTGCATC
CAGTTCAGTAACTTTCACAGATGATGAGTTATCACCAGAAGGCACCAGACACACTAAAGTCTTGCACATTACAGTTAAGTGCAAAAATTTTGTTGTGGCAAAAGTTCTAG
TTGATAATGGTTCTTCCTTGAACATAATGCCTAAATCCACGTTGGAGAAATTGCCTGTTGATATGTCTCATGTAAGACCTAGCACTATGATTGTACGAGCTTTTGATGGG
GCACGTAGTGAAGTTGTTGGAGACATAGAAGTGCCCATTCAGATAGGTCCATGCACCTTCGATATAACCTTTCAGGTTATGAACATTAATTCGGCCTACAGCTTCTTGTT
AGGGCGTCCCTGGATTCACTCAGCTGGAGTGGTCCCATCATCATTACACCAAAAGCTTAAATTTGTGGTCGACCGCAAACTAGTAATCATATCTAGGCAAGAGGATATCT
TAGTGTCAAGACTCTCTTCAATGCTCTACATAGAAGCAACATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEEICYLFQSKCSHDCIMIYSVIVVFCLLDFESFCCNVKEPELSIISSAGLFYNHLQKNNGNVEKTLATVKTKLDSRCVDEVLHKCSFELSQMGLRFFIWVGPQLNYRHS
SFMYSTTCEMIGINRSPCLLFNVIEDYRREGCLVDIRMFKVILNLCKEAKLAKESLSILGKVPEFHLQADTTMYNLIIRWLVVSKELSLASFTEFTEESKADKLLGGGIG
IRSKVGSQDTQITTLLQTSFNDGGLTRSGKCYTPEDLLKPKGKEKWKVKIIEDIKKKTEEPIAVKNLDVKKPTSEEDIQEFFKLVKQSDYKVVEQLGRTPAKIFVLAFLL
ASDTHRKTLLDILNQTYVPQVITVDNLDNIVGNITASSSVTFTDDELSPEGTRHTKVLHITVKCKNFVVAKVLVDNGSSLNIMPKSTLEKLPVDMSHVRPSTMIVRAFDG
ARSEVVGDIEVPIQIGPCTFDITFQVMNINSAYSFLLGRPWIHSAGVVPSSLHQKLKFVVDRKLVIISRQEDILVSRLSSMLYIEAT

Lag0038631 (gene) of Sponge gourd (AG-4) v1 genome