; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038641 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038641
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr2:22147712..22148780
RNA-Seq ExpressionLag0038641
SyntenyLag0038641
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143495.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]4.5e-6956.11Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK  N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  + +P L HSF S G I      S    A+  + E++ P++YPCP+ FEL+NW            S NTEIEC NDS+YELD PI+N
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESD+E +D EPSAELL M+EE EK LG HEELTE +NLGSQAE KE++IGT++S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

XP_022147181.1 uncharacterized protein LOC111016192 [Momordica charantia]1.8e-7358.02Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+ GQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK  N+ LD ++ ++KNTK+FGLGYKP + D+IRV   EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  + +P L HSF S GII      S     +  + E++GP++YPCP+ FEL+NW  +ELPSF    SN  EIEC NDS+YELD PI+N
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESDEE +D E S ELL M+ E EK LG HEELTE INLGSQAE KEV+IGTN+S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]8.0e-7457.63Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASM Y++ AEEAFESSFQ+FE+A+AT L+G+  + K R     FK  N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  +++P L HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  I+LPSF    SNNTEIEC NDS+YELD PI+ 
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESDEE +D EPSAELL M+EE EK LG HEELTE +NLGSQAE KE++IGT++S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

XP_022150030.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111018303 [Momordica charantia]3.5e-6956.11Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK +N  LD ++ ++KNT+RFGLGYKP++ D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  + +P L HS  S G I      S  A A+  + E++ P++YPCP+ F+L+NW            S NTEIEC NDS+YELD PI+N
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESDEE +D EPSAELL M+EE EK LG HEELTE +NLGSQAE KE++IGT++S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

XP_022155744.1 uncharacterized protein LOC111022791 [Momordica charantia]6.2e-4252.3Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASMPY++A EEAFESSFQ+FE+ +AT L+G+  + KSR     FK  N  LD ++ ++KNTK+FGLGYK  + D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSF
        RL+RFE+ E +Y  +++P L HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  IELPSF
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSF

TrEMBL top hitse value%identityAlignment
A0A6J1CNY7 Ribonuclease H2.2e-6956.11Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK  N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  + +P L HSF S G I      S    A+  + E++ P++YPCP+ FEL+NW            S NTEIEC NDS+YELD PI+N
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESD+E +D EPSAELL M+EE EK LG HEELTE +NLGSQAE KE++IGT++S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

A0A6J1D099 Ribonuclease H3.9e-7457.63Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASM Y++ AEEAFESSFQ+FE+A+AT L+G+  + K R     FK  N  LD ++ ++KNTK+FGLGYKP + D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  +++P L HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  I+LPSF    SNNTEIEC NDS+YELD PI+ 
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESDEE +D EPSAELL M+EE EK LG HEELTE +NLGSQAE KE++IGT++S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

A0A6J1D1K4 uncharacterized protein LOC1110161928.6e-7458.02Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+ GQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK  N+ LD ++ ++KNTK+FGLGYKP + D+IRV   EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  + +P L HSF S GII      S     +  + E++GP++YPCP+ FEL+NW  +ELPSF    SN  EIEC NDS+YELD PI+N
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESDEE +D E S ELL M+ E EK LG HEELTE INLGSQAE KEV+IGTN+S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

A0A6J1D7C7 Ribonuclease H1.7e-6956.11Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASMPY++AAEEAFESSFQ+FE+A+AT L+G+  + K R     FK +N  LD ++ ++KNT+RFGLGYKP++ D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN
        RL+RFE+ E +Y  + +P L HS  S G I      S  A A+  + E++ P++YPCP+ F+L+NW            S NTEIEC NDS+YELD PI+N
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHN

Query:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL
        +ESDEE +D EPSAELL M+EE EK LG HEELTE +NLGSQAE KE++IGT++S+E+RKKL
Subjt:  VESDEEEEDLEPSAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKL

A0A6J1DR66 uncharacterized protein LOC1110227913.0e-4252.3Show/hide
Query:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER
        LVI+SGQ+DILVSR ASMPY++A EEAFESSFQ+FE+ +AT L+G+  + KSR     FK  N  LD ++ ++KNTK+FGLGYK  + D+IRV+  EK +
Subjt:  LVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKER

Query:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSF
        RL+RFE+ E +Y  +++P L HSF S G I      S    A+  + E++GP++Y CP+ FEL+NW  IELPSF
Subjt:  RLARFESREPEYGEKVIPHLYHSFESVGIIRL----SDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTAGTAATTGTATCTGGTCAACAGGATATCTTGGTTTCTAGGTCAGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAA
ACATTTGAGGTGGCTAGTGCCACGGATCTATATGGAGAAAGCAAGAAATCTAAGTCTCGATCTTCAGTCATGACATTCAAGGAAAGCAACAGTCGTTTAGATGAT
GTTATAAGCCTATCAAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCCGGATAAAGCAGATATGATTAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCC
AGATTTGAAAGTCGTGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGTTGGTATAATTCGTCTAAGTGATTTTGCAGTTGCA
ATAGTGACTAAAGAGGAAGAAATGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGGGTACTATTGAATTACCATCATTTGCTGTTAAG
ATGTCAAATAATACTGAGATTGAATGTGCAAACGATTCTCAATACGAACTTGACATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATCTTGAACCT
AGTGCTGAGTTGTTAGAAATGATAGAGGAAGCGGAAAAAGCGTTGGGCCTCCATGAAGAGTTAACAGAGATAATTAACCTGGGATCACAAGCGGAAGTCAAGGAG
GTTCAAATTGGCACTAATGTCTCTACAGAAACTCGCAAAAAGCTTAGGCCCCGTTTGGTTCGTGATCCGTTTTCGTTTTTATGTTTTCGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTAGTAATTGTATCTGGTCAACAGGATATCTTGGTTTCTAGGTCAGCTTCAATGCCATATATTGATGCAGCAGAGGAAGCTTTTGAGTCATCATTTCAA
ACATTTGAGGTGGCTAGTGCCACGGATCTATATGGAGAAAGCAAGAAATCTAAGTCTCGATCTTCAGTCATGACATTCAAGGAAAGCAACAGTCGTTTAGATGAT
GTTATAAGCCTATCAAAAAATACAAAAAGATTTGGGCTTGGGTATAAGCCGGATAAAGCAGATATGATTAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCC
AGATTTGAAAGTCGTGAACCAGAATATGGAGAAAAAGTCATTCCTCATCTCTACCACTCGTTTGAAAGTGTTGGTATAATTCGTCTAAGTGATTTTGCAGTTGCA
ATAGTGACTAAAGAGGAAGAAATGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGGGTACTATTGAATTACCATCATTTGCTGTTAAG
ATGTCAAATAATACTGAGATTGAATGTGCAAACGATTCTCAATACGAACTTGACATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATCTTGAACCT
AGTGCTGAGTTGTTAGAAATGATAGAGGAAGCGGAAAAAGCGTTGGGCCTCCATGAAGAGTTAACAGAGATAATTAACCTGGGATCACAAGCGGAAGTCAAGGAG
GTTCAAATTGGCACTAATGTCTCTACAGAAACTCGCAAAAAGCTTAGGCCCCGTTTGGTTCGTGATCCGTTTTCGTTTTTATGTTTTCGAAAATAA
Protein sequenceShow/hide protein sequence
MSLVIVSGQQDILVSRSASMPYIDAAEEAFESSFQTFEVASATDLYGESKKSKSRSSVMTFKESNSRLDDVISLSKNTKRFGLGYKPDKADMIRVQKREKERRLA
RFESREPEYGEKVIPHLYHSFESVGIIRLSDFAVAIVTKEEEMGPWIYPCPENFELNNWGTIELPSFAVKMSNNTEIECANDSQYELDIPIHNVESDEEEEDLEP
SAELLEMIEEAEKALGLHEELTEIINLGSQAEVKEVQIGTNVSTETRKKLRPRLVRDPFSFLCFRK