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Lag0038647 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038647
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr2:22252836..22254178
RNA-Seq ExpressionLag0038647
SyntenyLag0038647
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMP03234.1 hypothetical protein COLO4_10561 [Corchorus olitorius]5.5e-1736.43Show/hide
Query:  CLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLDWF
        CLIGKLLS R++  +VMR      WK+ GGLQV  +G+   +F+F +E +  RV +QG W  +  LLV++     +S  + +  + AFWI + DLPL + 
Subjt:  CLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLDWF

Query:  NHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIMLLSN
           +   +G++ G   E D     + WG  LRI+  L  N
Subjt:  NHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIMLLSN

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]8.7e-2338.78Show/hide
Query:  AIDCSGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAF
        A++ +G  L   LI KLLS RS++  V++ T + AWK+D     V+++G N  LF F   +D  R++R G W  D  L++++ P+    P D  F   + 
Subjt:  AIDCSGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAF

Query:  WIHIFDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKI
        W+H FDL L   N  MA RLGNAIG+FE+ +       WGS LR+++
Subjt:  WIHIFDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKI

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.8e-2844.29Show/hide
Query:  LSFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPL
        L++ L+GKLL+ R ++A+V+ +    AWKV+  L V  +GKN  LF F  E D  RV++ G W  D  L+V++ P  S + S+ +F+  AFWIH+FDLP+
Subjt:  LSFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPL

Query:  DWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML
         W N  MA+RLGNAIG F + D  +   +WG+SLRI++++
Subjt:  DWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.8e-2137.93Show/hide
Query:  SGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHI
        +G  L   L+GKL   R +   VM+ T + AWK++    +V  LG N  LF F    D  ++ + G W  D  L+++  P+  + PS+  F+    W+  
Subjt:  SGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHI

Query:  FDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML
        FDLPL     +MA+RLGNA+G FEEAD      +WGS+LR+++ML
Subjt:  FDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML

XP_042964753.1 uncharacterized protein LOC122298977 [Carya illinoinensis]2.7e-1637.23Show/hide
Query:  LIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSP-SDYQFSYFAFWIHIFDLPLDWF
        LIGK+LS R LA +V+  T +  W++     +  +G+N  +  F   AD  R+V    W  D  L V+  P   +SP  D +F    FW+   +LPL   
Subjt:  LIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSP-SDYQFSYFAFWIHIFDLPLDWF

Query:  NHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML
        N E+ VRLG++IG  +E D     + WGSSLR+KI++
Subjt:  NHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML

TrEMBL top hitse value%identityAlignment
A0A1R3K847 Uncharacterized protein2.6e-1736.43Show/hide
Query:  CLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLDWF
        CLIGKLLS R++  +VMR      WK+ GGLQV  +G+   +F+F +E +  RV +QG W  +  LLV++     +S  + +  + AFWI + DLPL + 
Subjt:  CLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLDWF

Query:  NHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIMLLSN
           +   +G++ G   E D     + WG  LRI+  L  N
Subjt:  NHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIMLLSN

A0A2N9GF83 CCHC-type domain-containing protein1.7e-1635.77Show/hide
Query:  SFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLD
        S CL+GKLL  +S     ++ T    W V  G+    +G N  LF+F NE+DC RV +   WL DN LLV+     S   +   F+   FW+ +  +PL 
Subjt:  SFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLD

Query:  WFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKI
        +   +   R+G AIGI E+ D  +  + WG  LR++I
Subjt:  WFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKI

A0A6J1BSZ1 uncharacterized protein LOC1110054814.2e-2338.78Show/hide
Query:  AIDCSGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAF
        A++ +G  L   LI KLLS RS++  V++ T + AWK+D     V+++G N  LF F   +D  R++R G W  D  L++++ P+    P D  F   + 
Subjt:  AIDCSGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAF

Query:  WIHIFDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKI
        W+H FDL L   N  MA RLGNAIG+FE+ +       WGS LR+++
Subjt:  WIHIFDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKI

A0A6J1DU55 uncharacterized protein LOC1110231358.8e-2944.29Show/hide
Query:  LSFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPL
        L++ L+GKLL+ R ++A+V+ +    AWKV+  L V  +GKN  LF F  E D  RV++ G W  D  L+V++ P  S + S+ +F+  AFWIH+FDLP+
Subjt:  LSFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPL

Query:  DWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML
         W N  MA+RLGNAIG F + D  +   +WG+SLRI++++
Subjt:  DWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML

A0A6J1DX30 uncharacterized protein LOC1110248742.3e-2137.93Show/hide
Query:  SGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHI
        +G  L   L+GKL   R +   VM+ T + AWK++    +V  LG N  LF F    D  ++ + G W  D  L+++  P+  + PS+  F+    W+  
Subjt:  SGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVD-GGLQVNLLGKNFSLFKFVNEADCLRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHI

Query:  FDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML
        FDLPL     +MA+RLGNA+G FEEAD      +WGS+LR+++ML
Subjt:  FDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTACTCATTTAGAGAGTCAAATTTCTTGTTGAATAGCGATTTCTGGTGCAAGGAGTTCTCCTGGCGGCTTCAATGCGTTGATCCAGTAGATTGGGCACAGAGGCA
ACCGTTGCTCTCCATCGTCTGCAGTGGAACATTCGCAATCGACTGTTCTGGCCTTGTGTTGAGTTTCTGTCTGATCGGGAAACTCCTTTCTCATCGATCTCTGGCAGCAG
AGGTTATGAGAAAAACCTTTCAAGCTGCGTGGAAGGTTGATGGCGGATTGCAAGTAAATCTTTTGGGAAAAAATTTTTCCCTTTTCAAATTTGTGAACGAAGCAGATTGT
CTCCGAGTTGTTCGTCAGGGACTGTGGTTACTTGATAATTTCCTGTTGGTTATGGAATTCCCAATCCGATCACTGAGCCCATCAGACTACCAATTCTCTTATTTCGCGTT
TTGGATCCACATCTTTGATCTCCCTTTGGATTGGTTCAACCATGAGATGGCGGTTCGTTTGGGTAATGCTATCGGTATTTTTGAAGAAGCTGATGGTCGAAAGGGATTTC
TCAATTGGGGATCGAGTCTTCGAATTAAGATTATGCTGCTGAGCAACTGGAGGGAGCAAATTCTATGCTGCAGCAAAACTGGGAGCATAAACTACCACATCACAGCTCGT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGTACTACTCATTTAGAGAGTCAAATTTCTTGTTGAATAGCGATTTCTGGTGCAAGGAGTTCTCCTGGCGGCTTCAATGCGTTGATCCAGTAGATTGGGCACAGAGGCA
ACCGTTGCTCTCCATCGTCTGCAGTGGAACATTCGCAATCGACTGTTCTGGCCTTGTGTTGAGTTTCTGTCTGATCGGGAAACTCCTTTCTCATCGATCTCTGGCAGCAG
AGGTTATGAGAAAAACCTTTCAAGCTGCGTGGAAGGTTGATGGCGGATTGCAAGTAAATCTTTTGGGAAAAAATTTTTCCCTTTTCAAATTTGTGAACGAAGCAGATTGT
CTCCGAGTTGTTCGTCAGGGACTGTGGTTACTTGATAATTTCCTGTTGGTTATGGAATTCCCAATCCGATCACTGAGCCCATCAGACTACCAATTCTCTTATTTCGCGTT
TTGGATCCACATCTTTGATCTCCCTTTGGATTGGTTCAACCATGAGATGGCGGTTCGTTTGGGTAATGCTATCGGTATTTTTGAAGAAGCTGATGGTCGAAAGGGATTTC
TCAATTGGGGATCGAGTCTTCGAATTAAGATTATGCTGCTGAGCAACTGGAGGGAGCAAATTCTATGCTGCAGCAAAACTGGGAGCATAAACTACCACATCACAGCTCGT
TAG
Protein sequenceShow/hide protein sequence
MYYSFRESNFLLNSDFWCKEFSWRLQCVDPVDWAQRQPLLSIVCSGTFAIDCSGLVLSFCLIGKLLSHRSLAAEVMRKTFQAAWKVDGGLQVNLLGKNFSLFKFVNEADC
LRVVRQGLWLLDNFLLVMEFPIRSLSPSDYQFSYFAFWIHIFDLPLDWFNHEMAVRLGNAIGIFEEADGRKGFLNWGSSLRIKIMLLSNWREQILCCSKTGSINYHITAR