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Lag0038669 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038669
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:22902588..22903597
RNA-Seq ExpressionLag0038669
SyntenyLag0038669
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030483669.1 uncharacterized protein LOC115700241 [Cannabis sativa]1.5e-3849.69Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+ +E+   + G  ++RT+P VSHLFFADD++LF +A     R I+ IL  YG+AS Q VN +K V++FSPNT  + Q +   +L++   PCH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPSF  R++      + D IWK +  WKE+ FS GGKEVLLK++VQAIP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

XP_030498122.1 uncharacterized protein LOC115713779 [Cannabis sativa]2.8e-3749.69Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+  E    + G  ++RT+P VSHLFFADD++LF +A     R I+ +L  Y +AS Q VN +K V++FSPNT    Q Y  Q+L++   PCH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPSF  R++      + D IWK +  WKE+ FS GGKEVLLK++VQAIP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

XP_030502375.1 uncharacterized protein LOC115717530 [Cannabis sativa]7.7e-3545.96Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +G S LL+  +    + GF L R +PP++HLFFADD+LLF QA       I+ +L  Y KAS Q +N  K V++FSPNT +  Q +  Q L++    CH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPS+  R++ +    +++ IWK +  W EKFF  GGKEVLLK++VQ+IP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]5.9e-3547.2Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+  E    + G  ++R++P VSHLFFADD++LF +A     R I   L+ Y +AS Q +N EK V++FS NT    Q +   +L +   PCH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPSF  +N+      + D IWK +  WKE  FS GGKEVLLK++VQAIP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

XP_030508858.1 uncharacterized protein LOC115723499 [Cannabis sativa]5.3e-3647.83Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+  E    + G  ++RT+P VSHLFFADD++LF +A     R I+ +L  Y +AS Q +N +K V++FSPNT    Q +  Q+L++   PCH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPSF  R++      + D IW  +  WKE+ FS GGKEVLLK++VQAIP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

TrEMBL top hitse value%identityAlignment
A0A5B7BN08 Reverse transcriptase domain-containing protein3.7e-3545.34Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +  S+LLR +E ++ I G  +AR +P VSHLFFADD+LLF  A   +   I  I+  YG AS Q VN+EK  ++FS N   + ++ + QIL VS    H+
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPS + R++      +RD +W++++GWKEK  S  G+EVL+KS+ QAIP Y M+CF+
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

A0A803PYN5 Uncharacterized protein5.7e-3645.96Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+  E   ++ G CL R SP VSHL FADD+LLF Q        I+  L  Y KAS Q +N +K V++FSPNT  + Q + +Q L +    CH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPS+  R++ +    +++ +WK +  W EK FS GGKEVLLK++VQ+IP Y M+CF+
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

A0A803QC75 Uncharacterized protein9.8e-3645.96Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +G S LL+  +  + + GF L R +PP++HLFFADD+LLF QA       I+ +L  Y KAS Q +N +K V++FSPNT +  Q +  Q LS+    CH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPS+  R++ +    +++ IWK +  W EK FS GGKE+LLK++VQ+IP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

A0A803QHU6 Uncharacterized protein1.5e-3647.83Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+  E+   ++G  L R SP VSHL FADD+LLF Q+     R I+  L  Y KAS Q +N +K V++FSPNT+   Q + SQ L +    CH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPS+  R++++    +++ IWK +  W EK FS GGKEVLLK++VQ+IP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

A0A803QJN9 Uncharacterized protein7.2e-3949.69Show/hide
Query:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH
        +GLS LL+ +E+   + G  ++RT+P VSHLFFADD++LF +A     R I+ IL  YG+AS Q VN +K V++FSPNT  + Q +   +L++   PCH 
Subjt:  KGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHH

Query:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR
         YLGLPSF  R++      + D IWK +  WKE+ FS GGKEVLLK++VQAIP Y M+CFR
Subjt:  HYLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCGCGTCTGACTCCAGATCAGAAGGGCCTGTCCAGTTTGCTTCGGGGGGCTGAACGTCAATCTCTTATCTCAGGATTTTGTTTGGCTCGCACTAGCCCACCAGT
GTCACACCTGTTTTTTGCAGATGACAACCTTCTTTTCTTCCAGGCTAAAGCAACTGAGGGGAGGGTTATTCGAGATATCCTAGTGAATTATGGAAAAGCATCTAGGCAGA
CGGTAAACTATGAGAAGTTTGTGGTTGCATTCAGCCCGAATACAAATATCGAGTGTCAACAATATGTTAGCCAGATTCTATCGGTATCCTGCATACCATGCCACCACCAC
TACTTAGGCCTTCCGTCATTCATGCCACGAAATAGGGCCGATACATTGAAGTTTGTTAGAGACTGGATTTGGAAGCAGGTTCAAGGGTGGAAGGAAAAGTTCTTCTCCAC
TGGCGGTAAGGAGGTCCTTCTGAAATCAATAGTTCAAGCGATACCCTGTTACACGATGAACTGTTTCCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCGCGTCTGACTCCAGATCAGAAGGGCCTGTCCAGTTTGCTTCGGGGGGCTGAACGTCAATCTCTTATCTCAGGATTTTGTTTGGCTCGCACTAGCCCACCAGT
GTCACACCTGTTTTTTGCAGATGACAACCTTCTTTTCTTCCAGGCTAAAGCAACTGAGGGGAGGGTTATTCGAGATATCCTAGTGAATTATGGAAAAGCATCTAGGCAGA
CGGTAAACTATGAGAAGTTTGTGGTTGCATTCAGCCCGAATACAAATATCGAGTGTCAACAATATGTTAGCCAGATTCTATCGGTATCCTGCATACCATGCCACCACCAC
TACTTAGGCCTTCCGTCATTCATGCCACGAAATAGGGCCGATACATTGAAGTTTGTTAGAGACTGGATTTGGAAGCAGGTTCAAGGGTGGAAGGAAAAGTTCTTCTCCAC
TGGCGGTAAGGAGGTCCTTCTGAAATCAATAGTTCAAGCGATACCCTGTTACACGATGAACTGTTTCCGATAA
Protein sequenceShow/hide protein sequence
MVARLTPDQKGLSSLLRGAERQSLISGFCLARTSPPVSHLFFADDNLLFFQAKATEGRVIRDILVNYGKASRQTVNYEKFVVAFSPNTNIECQQYVSQILSVSCIPCHHH
YLGLPSFMPRNRADTLKFVRDWIWKQVQGWKEKFFSTGGKEVLLKSIVQAIPCYTMNCFR