; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038683 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038683
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease P
Genome locationchr2:23237773..23238717
RNA-Seq ExpressionLag0038683
SyntenyLag0038683
Gene Ontology termsGO:0001682 - tRNA 5'-leader removal (biological process)
GO:0006364 - rRNA processing (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000172 - ribonuclease MRP complex (cellular component)
GO:0005655 - nucleolar ribonuclease P complex (cellular component)
GO:0004526 - ribonuclease P activity (molecular function)
InterPro domainsIPR002759 - RNase P subunit Pop5/Rpp14/Rnp2-like
IPR038085 - RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139703.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus]2.6e-6683.01Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MVRFKNRY+V EVLLDPNKD+  DDPIIIT YNVSKAIKDSILLNFGECGFAS+L SFQVKYVNPITK+CIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDLSGNT+ACKNTALRL+ LKFE+YKLMVG +L D+VN QM NCLEKI  ++
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

XP_022932062.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita moschata]4.3e-6985.62Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIIT YNVSKAIKDSILLNFGECGFASSL SFQV+YVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDL+GN++ACKNTALRLDELKFE+YKLMVGP +SD VN QM NCLEKIR +D
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

XP_022972913.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]4.3e-6985.62Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIIT YNVSKAIKDSILLNFGECGFASSL SFQVKYVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDL+GN++ACKNTALR+DELKFE+YKLMVGP +SD VN QM NCLEKIR +D
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

XP_023524475.1 probable ribonuclease P/MRP protein subunit POP5 [Cucurbita pepo subsp. pepo]1.5e-6985.62Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MV FKNRYLV EV LDPNKD+A DDPIIIT YNVSKAIKDSILLNFGECGFASSL SFQV+YVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDL+GN++ACKNTALR+DELKFE+YKLMVGP++SD VN QMHNCLEKIR +D
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

XP_038899949.1 probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]1.6e-6886.27Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MVRFKNRY+VLEVLLDPNKD+  DDPIIIT YNVSKAIKDSILLNFGECGFASSL SFQVKYVNPITKLCIIRASREDY+NVWAA TMVRTISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDLSGNT+ACKNTALRLD+LKFE+YKLMVG  L D+VN QM NCLEKI  ++
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

TrEMBL top hitse value%identityAlignment
A0A1S3CEI9 Ribonuclease P5.3e-6582.35Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MVRFKNRY+V EVLLDPNK++  DDPIIIT YNVSKAIKDSILLNFGECGFAS+L SFQVKYVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDLSGNT+ACKNTALRLD LKFE+YKLMVG  L D+V   M NCLEKI  ++
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

A0A5D3CDD4 Ribonuclease P8.2e-6683.01Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MVRFKNRY+V EVLLDPNK++  DDPIIIT YNVSKAIKDSILLNFGECGFAS+L SFQVKYVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDLSGNT+ACKNTALRLD LKFE+YKLMVG  L D+V  QM NCLEKI  ++
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

A0A6J1CLH1 Ribonuclease P2.0e-6479.74Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MVR++NRYL+LEV+LDP KD A DD IIIT YN+SKAIKDSILLNFGECGFAS+L SFQV+YVNPITKLCIIR S+EDY+ VWAA TMVRTI NCPV+FN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDL+GNT+ACKNTALR +ELKFE+YKLMVG  LSDDVN QM NCLEKIR  D
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

A0A6J1EVL4 Ribonuclease P2.1e-6985.62Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIIT YNVSKAIKDSILLNFGECGFASSL SFQV+YVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDL+GN++ACKNTALRLDELKFE+YKLMVGP +SD VN QM NCLEKIR +D
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

A0A6J1IBH7 Ribonuclease P2.1e-6985.62Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN
        MV FKNRYLV EV+LDPNKD+A DDPIIIT YNVSKAIKDSILLNFGECGFASSL SFQVKYVNPITKLCIIRASREDY+NVWAA TMVR+ISNCPVVFN
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFN

Query:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        LLDL+GN++ACKNTALR+DELKFE+YKLMVGP +SD VN QM NCLEKIR +D
Subjt:  LLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

SwissProt top hitse value%identityAlignment
Q1JQ92 Ribonuclease P/MRP protein subunit POP54.0e-0928.08Show/hide
Query:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISN----C
        MVRFK+RYL+ EV+  DP   +  +D ++ T       ++D+I    G  G A+    F V+Y+N  T + ++R  +E YR VW+A   + ++ N     
Subjt:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISN----C

Query:  PVVFNLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQ
        P   N L + G  + C+   ++ +     R  L++  + +D+  R+
Subjt:  PVVFNLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQ

Q54EP3 Probable ribonuclease P/MRP protein subunit POP52.8e-1030.25Show/hide
Query:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVF
        MVR KNRYL+ EV+  D  K     D  +     +S  +K+ +    GE  + +   + ++ YVNP T + IIR S E Y+++W A T++ +    P+ F
Subjt:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVF

Query:  NLLDLSGNTKACKNTALRL
         ++ + G+ + C+  A+++
Subjt:  NLLDLSGNTKACKNTALRL

Q6AWV1 Probable ribonuclease P/MRP protein subunit POP51.1e-4659.09Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVF
        MV FKNRY+++EV LDP+KD+  +  PII+T +N+SKAIKDSIL+NFGECG  SSL SFQVKYVNPITKLCI+R+SRE++R VW A T+V++I NCPV+ 
Subjt:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVF

Query:  NLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        NLLD+SG  +AC++TAL+ D+ KFE+        LS++  RQM+  LEKI+ ++
Subjt:  NLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD

Q969H6 Ribonuclease P/MRP protein subunit POP51.0e-0928.08Show/hide
Query:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISN----C
        MVRFK+RYL+ E++  DP   ++ DD ++      S  ++D+I    G  G A+    F V+Y+N  T + ++R  +E Y+ VW+A   +  + N     
Subjt:  MVRFKNRYLVLEVLL-DPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISN----C

Query:  PVVFNLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQ
        P  FN L + G  + C+   ++ +     R  L++  + +D+  R+
Subjt:  PVVFNLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQ

Q9UU90 Ribonuclease P/MRP protein subunit POP58.3e-1535.04Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAADDPII-----ITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNC
        MVRFK+RYL+ EVL    K+   D P I     IT  ++SK I+  +  NFG+ G     +S  VKY +P T   I+R SR+ +R  WAA  ++R +   
Subjt:  MVRFKNRYLVLEVLLDPNKDIAADDPII-----ITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNC

Query:  PVVFNLLDLSGNTKACKNTALRLDELKFERYKLMVGP
        PV+  ++ +SG  K  +  A+  ++ +     LM  P
Subjt:  PVVFNLLDLSGNTKACKNTALRLDELKFERYKLMVGP

Arabidopsis top hitse value%identityAlignment
AT1G04635.1 ribonuclease P family protein / Rpp14 family protein7.6e-4859.09Show/hide
Query:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVF
        MV FKNRY+++EV LDP+KD+  +  PII+T +N+SKAIKDSIL+NFGECG  SSL SFQVKYVNPITKLCI+R+SRE++R VW A T+V++I NCPV+ 
Subjt:  MVRFKNRYLVLEVLLDPNKDIAAD-DPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVF

Query:  NLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD
        NLLD+SG  +AC++TAL+ D+ KFE+        LS++  RQM+  LEKI+ ++
Subjt:  NLLDLSGNTKACKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGTTTAAGAATCGATACTTGGTTCTCGAAGTTCTGTTGGATCCCAATAAAGACATTGCAGCAGATGATCCTATTATCATTACCCCATATAATGTTTCAAAAGC
AATCAAGGACAGCATTCTTCTCAACTTCGGAGAGTGTGGTTTTGCTTCCTCACTTGCATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTGTGTATAATTAGAG
CCTCTAGAGAGGACTACCGAAATGTCTGGGCTGCAACTACCATGGTGAGGACGATCAGCAATTGCCCTGTTGTATTTAATCTACTGGACCTAAGTGGAAATACAAAGGCT
TGCAAAAACACTGCCTTGAGGCTGGATGAATTGAAGTTTGAGCGATACAAGCTTATGGTTGGACCTCATCTCTCTGATGATGTCAATCGGCAAATGCACAACTGTCTTGA
GAAGATTAGAAGAGTAGACGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGGTTTAAGAATCGATACTTGGTTCTCGAAGTTCTGTTGGATCCCAATAAAGACATTGCAGCAGATGATCCTATTATCATTACCCCATATAATGTTTCAAAAGC
AATCAAGGACAGCATTCTTCTCAACTTCGGAGAGTGTGGTTTTGCTTCCTCACTTGCATCTTTTCAAGTTAAGTATGTAAATCCAATCACGAAGTTGTGTATAATTAGAG
CCTCTAGAGAGGACTACCGAAATGTCTGGGCTGCAACTACCATGGTGAGGACGATCAGCAATTGCCCTGTTGTATTTAATCTACTGGACCTAAGTGGAAATACAAAGGCT
TGCAAAAACACTGCCTTGAGGCTGGATGAATTGAAGTTTGAGCGATACAAGCTTATGGTTGGACCTCATCTCTCTGATGATGTCAATCGGCAAATGCACAACTGTCTTGA
GAAGATTAGAAGAGTAGACGTCTAG
Protein sequenceShow/hide protein sequence
MVRFKNRYLVLEVLLDPNKDIAADDPIIITPYNVSKAIKDSILLNFGECGFASSLASFQVKYVNPITKLCIIRASREDYRNVWAATTMVRTISNCPVVFNLLDLSGNTKA
CKNTALRLDELKFERYKLMVGPHLSDDVNRQMHNCLEKIRRVDV