; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038696 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038696
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr2:23585819..23586355
RNA-Seq ExpressionLag0038696
SyntenyLag0038696
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.6e-3760.65Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+S+TT EEENQC   T TR SAF+ LS+ST KK R S S F  LK+ +DQ QR+M +L+VK F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ S V SR KRK  V INTEGSL+VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-3660.65Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EEENQC   T  R SAF+RLS+ST KK R S S F  LK+T+DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ S V SR KRK  V INTEGSL VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.5e-3659.62Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EEENQC + T TR SAF+RLS+S  KK R S S F  LK+T+DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKSF
         + D+K+ S V SR KRK  + INTEGSL VKP  II TNPI+EG +   DE+K F
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKSF
TYK00108.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.6e-3760Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EE+NQC   T TR SAF+RLS+ST KK R S S F  +K+ +DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ S V SR KRK FV INTEGSL VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.3e-3659.35Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EE+NQC   T  R SAF+RLS+ST KK R S S F  LK+T+DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ + V SR KRK  V INTEGSL VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
TrEMBL top hitse value%identityAlignment
A0A5A7SMQ5 Retrotransposon gag protein2.1e-3660Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR S FQR+SM T EEENQC   T  R SAF+RLS+ST KK R S S F  LK+T+DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K++S V SR KRK  V INTEGSL VKP  II TNPI+EG     DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
A0A5A7TGM1 Retrotransposon gag protein3.2e-3760.65Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+S+TT EEENQC   T TR SAF+ LS+ST KK R S S F  LK+ +DQ QR+M +L+VK F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ S V SR KRK  V INTEGSL+VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
A0A5A7TQ06 Retrotransposon gag protein5.4e-3760.65Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EEENQC   T  R SAF+RLS+ST KK R S S F  LK+T+DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ S V SR KRK  V INTEGSL VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
A0A5A7U974 Retrotransposon gag protein7.1e-3759.62Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EEENQC + T TR SAF+RLS+S  KK R S S F  LK+T+DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKSF
         + D+K+ S V SR KRK  + INTEGSL VKP  II TNPI+EG +   DE+K F
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKSF
A0A5D3BLW3 Retrotransposon gag protein3.2e-3760Show/hide
Query:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE
        Y+  E+VDNS + +QRTSVFDRIKP TTR SVFQR+SM T EE+NQC   T TR SAF+RLS+ST KK R S S F  +K+ +DQ QR+M +L+ K F E
Subjt:  YNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTDDQPQRKMDNLEVKLFDE

Query:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
         + D+K+ S V SR KRK FV INTEGSL VKP  II TNPI+EG +   DE+KS
Subjt:  VSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAATGAAACCTACTCCAAAACTTTCCATAGAAAGGAAAAAGGAAACTTTGCAACTTCCTACTACAACGACATAGAAAAAGTTGACAATTCCAAAAAGGGT
GAACAAAGAACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGACCACAACAGAAGAAGAAAATCAATGTTTG
GTGTTCACCTCCACTCGACCTTCAGCTTTTCAAAGGCTAAGTGTCTCCACATTGAAAAAGAGTCGATCTTCAATATCTGTCTTTGCTTGCCTCAAAGTAACAGAC
GATCAACCTCAGAGAAAGATGGATAACTTAGAAGTGAAACTGTTTGATGAAGTAAGTAGTGACGAGAAGCTTCAAAGTATTGTCCTGTCACGTACGAAAAGGAAG
TTCTTTGTTTTCATAAATACAGAAGGTTCCTTGATGGTGAAGCCAAATCTCATTATCCTGACCAATCCTATAAGCGAAGGATTTGATCTAGACCATGATGAAGAT
AAGAGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAATGAAACCTACTCCAAAACTTTCCATAGAAAGGAAAAAGGAAACTTTGCAACTTCCTACTACAACGACATAGAAAAAGTTGACAATTCCAAAAAGGGT
GAACAAAGAACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGACCACAACAGAAGAAGAAAATCAATGTTTG
GTGTTCACCTCCACTCGACCTTCAGCTTTTCAAAGGCTAAGTGTCTCCACATTGAAAAAGAGTCGATCTTCAATATCTGTCTTTGCTTGCCTCAAAGTAACAGAC
GATCAACCTCAGAGAAAGATGGATAACTTAGAAGTGAAACTGTTTGATGAAGTAAGTAGTGACGAGAAGCTTCAAAGTATTGTCCTGTCACGTACGAAAAGGAAG
TTCTTTGTTTTCATAAATACAGAAGGTTCCTTGATGGTGAAGCCAAATCTCATTATCCTGACCAATCCTATAAGCGAAGGATTTGATCTAGACCATGATGAAGAT
AAGAGCTTTTAA
Protein sequenceShow/hide protein sequence
MLNETYSKTFHRKEKGNFATSYYNDIEKVDNSKKGEQRTSVFDRIKPPTTRPSVFQRMSMTTTEEENQCLVFTSTRPSAFQRLSVSTLKKSRSSISVFACLKVTD
DQPQRKMDNLEVKLFDEVSSDEKLQSIVLSRTKRKFFVFINTEGSLMVKPNLIILTNPISEGFDLDHDEDKSF