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Lag0038699 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038699
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzinc ion binding;nucleic acid binding
Genome locationchr2:23701066..23702316
RNA-Seq ExpressionLag0038699
SyntenyLag0038699
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4378452.1 hypothetical protein F8388_021646 [Cannabis sativa]4.1e-1643.4Show/hide
Query:  LVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTTQNC
        L  FW+Q + LP      +MAE  GN +G +VD        GW   +R R  LDISKPL RG  V+L D L  +W   RYE L E C  CGIIGH  ++C
Subjt:  LVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTTQNC

Query:  SSFYMD
          F  +
Subjt:  SSFYMD

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.3e-2142.97Show/hide
Query:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC
        + K   MDF+ VS WV F++L +   N +MA RLGNA+G F D ++      W   +RVRV+ D+ KPL RGIK+ LD P+G  W PI+YE L +    C
Subjt:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC

Query:  GIIGHTTQNCSSFYMDSNSSSQRHQYDP
        G + H  ++CS   +D  S S+  QY P
Subjt:  GIIGHTTQNCSSFYMDSNSSSQRHQYDP

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.8e-2746.34Show/hide
Query:  MDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHT
        ++F  V+FW+  ++LPM   N +MA RLGNA+G FVD D  E+   W  S+R+RV +DI+KPLRRGIK+ +D P+G  W PI+YE L + C FCG+IGH+
Subjt:  MDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHT

Query:  TQNCSSFYMDSNSSSQ-RHQYDP
        + +C + Y+ +   S+   +Y P
Subjt:  TQNCSSFYMDSNSSSQ-RHQYDP

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.3e-1941.27Show/hide
Query:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC
        ++    +DF  +  WV+F++LP+      MA RLGNA+G F + D  +    W  ++RVRV LDISKPLRRGIK+ LD P+G  W PI+YE L + C  C
Subjt:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC

Query:  GIIGHTTQNCSSFYMDSNSSSQRHQY
        G+               +SS ++HQY
Subjt:  GIIGHTTQNCSSFYMDSNSSSQRHQY

XP_035546596.1 uncharacterized protein LOC118348645 [Juglans regia]2.4e-1637.4Show/hide
Query:  MDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHT
        +DF L  FW+Q  +LP    N   +E+LG + GK +  D  E+   W E +RV+V +D+SKPL RG  + + D     W P +YE+L   C +CGI+ HT
Subjt:  MDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHT

Query:  TQNCSSFYMDSNSSSQRH-QYDP
           CS  + D ++ ++   QY P
Subjt:  TQNCSSFYMDSNSSSQRH-QYDP

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054812.1e-2142.97Show/hide
Query:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC
        + K   MDF+ VS WV F++L +   N +MA RLGNA+G F D ++      W   +RVRV+ D+ KPL RGIK+ LD P+G  W PI+YE L +    C
Subjt:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC

Query:  GIIGHTTQNCSSFYMDSNSSSQRHQYDP
        G + H  ++CS   +D  S S+  QY P
Subjt:  GIIGHTTQNCSSFYMDSNSSSQRHQYDP

A0A6J1DU55 uncharacterized protein LOC1110231358.6e-2846.34Show/hide
Query:  MDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHT
        ++F  V+FW+  ++LPM   N +MA RLGNA+G FVD D  E+   W  S+R+RV +DI+KPLRRGIK+ +D P+G  W PI+YE L + C FCG+IGH+
Subjt:  MDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHT

Query:  TQNCSSFYMDSNSSSQ-RHQYDP
        + +C + Y+ +   S+   +Y P
Subjt:  TQNCSSFYMDSNSSSQ-RHQYDP

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-1941.27Show/hide
Query:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC
        ++    +DF  +  WV+F++LP+      MA RLGNA+G F + D  +    W  ++RVRV LDISKPLRRGIK+ LD P+G  W PI+YE L + C  C
Subjt:  MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFC

Query:  GIIGHTTQNCSSFYMDSNSSSQRHQY
        G+               +SS ++HQY
Subjt:  GIIGHTTQNCSSFYMDSNSSSQRHQY

A0A803Q6Y1 Uncharacterized protein6.9e-1739.62Show/hide
Query:  DFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTT
        D +   FWVQ Y +P    +  +A+ LGN +G+F++        GW   +R+RV++D++KPLRRG  +RL      +W   RYE L E C  CG +GH  
Subjt:  DFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTT

Query:  QNCSSF
        Q CS+F
Subjt:  QNCSSF

A0A803QHU7 Uncharacterized protein1.2e-1645.92Show/hide
Query:  DFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGH
        D K   FWVQ Y LP      S+A  LGN +G+F+D        GW   +RVRV+LD+SKPL+RG  + L +    +W   RYE L E C  CGIIGH
Subjt:  DFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01050.1 zinc ion binding;nucleic acid binding2.0e-0524.27Show/hide
Query:  DFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTT
        D      WV+   +P + Y+  +   +   +G+ +  D            RV ++++++KPL+  + +  D     Y+  + YE L ++CS CGI GH  
Subjt:  DFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTT

Query:  QNC
         +C
Subjt:  QNC

AT5G36228.1 nucleic acid binding;zinc ion binding1.0e-0425.25Show/hide
Query:  VSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTTQNC
        +  WV    +P+   +    E + + +G+ V  D  E        IRV+V++D ++PLR   +VR      +      YE+L  +C+ C  + H   +C
Subjt:  VSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTTQNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAAGGCACAAGCGATGGATTTCAAATTAGTCTCGTTCTGGGTCCAGTTTTATGAGCTTCCAATGGATCTTTACAACTCTTCAATGGCAGAACGGTTGGGAAATGC
AGTGGGCAAGTTCGTGGATTATGATAATGGAGAAAGGCGACATGGGTGGAAGGAGAGCATACGAGTTCGTGTCCAATTAGATATCTCAAAACCCCTCCGACGAGGCATCA
AAGTCAGGCTCGATGATCCCTTAGGTAGCTACTGGTCCCCAATTCGTTATGAAGAATTACTAGAGCTATGTTCTTTCTGCGGCATAATTGGGCATACGACTCAGAATTGT
AGCTCCTTCTATATGGACAGCAACTCATCTTCTCAACGGCACCAATACGATCCACCAGCAACTTGGATCGAGCAGCGACGATGTAGACTCTCGGACTCAAGATTCCGACA
GCAAACTGATGAGATCTCGCCGGCGATTGAAGAGGCAGTTATGGTTCCATTAAAATCGATTCACTCGTTCGGTCAAGAGAGCATTAATGATGGCGTTAATGCAGATTTAT
CGAGGGCAAAGAAGAAGCTGGATTTCACGGACGTTACACTTTTCCCTTCGATTACGTCGACCTCAAGCGTCCAACAACCAGCAGGGTTTGAATCTTTGGCCCACGGAGAA
TCCAAGCCCATTTCAGTCTCATTTGGGCCTGCTTTCTACTCTTTATCCGGTTTTCAGTTTAAGGAAGAAGGCAAACAACGAAGTGAGCAGCAGGTTCCGAATTTGATTTC
CAATCATCTAGTGCAACAGGTGGTCTTGGGCTTACCAAATTCAAAATGGCAGAGGCGGGGGAGATCCAAATTATCTAGAGTTGCGAATGCTTCAACATTGGATTTTTTTA
AAAAGTGTGTCAGCGATGGCCTTATTGGAGGAATCAAGAAACAACCTCGAATGGAGAATGAGGAAGAACCAATCTACCATGAAACATCGGCGGAGGCTGAAAATCAGCCC
CGCCATGAGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAAGGCACAAGCGATGGATTTCAAATTAGTCTCGTTCTGGGTCCAGTTTTATGAGCTTCCAATGGATCTTTACAACTCTTCAATGGCAGAACGGTTGGGAAATGC
AGTGGGCAAGTTCGTGGATTATGATAATGGAGAAAGGCGACATGGGTGGAAGGAGAGCATACGAGTTCGTGTCCAATTAGATATCTCAAAACCCCTCCGACGAGGCATCA
AAGTCAGGCTCGATGATCCCTTAGGTAGCTACTGGTCCCCAATTCGTTATGAAGAATTACTAGAGCTATGTTCTTTCTGCGGCATAATTGGGCATACGACTCAGAATTGT
AGCTCCTTCTATATGGACAGCAACTCATCTTCTCAACGGCACCAATACGATCCACCAGCAACTTGGATCGAGCAGCGACGATGTAGACTCTCGGACTCAAGATTCCGACA
GCAAACTGATGAGATCTCGCCGGCGATTGAAGAGGCAGTTATGGTTCCATTAAAATCGATTCACTCGTTCGGTCAAGAGAGCATTAATGATGGCGTTAATGCAGATTTAT
CGAGGGCAAAGAAGAAGCTGGATTTCACGGACGTTACACTTTTCCCTTCGATTACGTCGACCTCAAGCGTCCAACAACCAGCAGGGTTTGAATCTTTGGCCCACGGAGAA
TCCAAGCCCATTTCAGTCTCATTTGGGCCTGCTTTCTACTCTTTATCCGGTTTTCAGTTTAAGGAAGAAGGCAAACAACGAAGTGAGCAGCAGGTTCCGAATTTGATTTC
CAATCATCTAGTGCAACAGGTGGTCTTGGGCTTACCAAATTCAAAATGGCAGAGGCGGGGGAGATCCAAATTATCTAGAGTTGCGAATGCTTCAACATTGGATTTTTTTA
AAAAGTGTGTCAGCGATGGCCTTATTGGAGGAATCAAGAAACAACCTCGAATGGAGAATGAGGAAGAACCAATCTACCATGAAACATCGGCGGAGGCTGAAAATCAGCCC
CGCCATGAGCCATGA
Protein sequenceShow/hide protein sequence
MVKAQAMDFKLVSFWVQFYELPMDLYNSSMAERLGNAVGKFVDYDNGERRHGWKESIRVRVQLDISKPLRRGIKVRLDDPLGSYWSPIRYEELLELCSFCGIIGHTTQNC
SSFYMDSNSSSQRHQYDPPATWIEQRRCRLSDSRFRQQTDEISPAIEEAVMVPLKSIHSFGQESINDGVNADLSRAKKKLDFTDVTLFPSITSTSSVQQPAGFESLAHGE
SKPISVSFGPAFYSLSGFQFKEEGKQRSEQQVPNLISNHLVQQVVLGLPNSKWQRRGRSKLSRVANASTLDFFKKCVSDGLIGGIKKQPRMENEEEPIYHETSAEAENQP
RHEP