; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038770 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038770
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistone deacetylase
Genome locationchr2:26291417..26293542
RNA-Seq ExpressionLag0038770
SyntenyLag0038770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB1321336.1 unnamed protein product, partial [Coregonus sp. 'balchen']8.8e-0628.48Show/hide
Query:  QSDWSRQVVKSLQIDILGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDR
        QSD    V+     +++G+L+F  D  V +L+F      D    +L+F  D  VG+L+F  D    +L+F  D        +L+F  D   G+L+F  D 
Subjt:  QSDWSRQVVKSLQIDILGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDR

Query:  HVGLLIFLDDRSTDLLIFSDDRF-------DDQFADLLIF----LIGLLTY
         VG+L+F  D    +L+F  D          D    +L+F    ++G+L +
Subjt:  HVGLLIFLDDRSTDLLIFSDDRF-------DDQFADLLIF----LIGLLTY

WP_207114037.1 hypothetical protein [Enterococcus hulanensis]3.4e-0544.26Show/hide
Query:  LDDRSVDLLIFVIDRFDDRSADLLI--FLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFL--DDRPVGLLIFL---DDRHVGLLIFL--DDRST
        LDD SV+LL+  +   DD S +LL+   LDD  V LL+  DD S +LL+   D  DD S +LL+ L  DD  V LL+ L   DD  V LL+ L  DD S 
Subjt:  LDDRSVDLLIFVIDRFDDRSADLLI--FLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFL--DDRPVGLLIFL---DDRHVGLLIFL--DDRST

Query:  DLLIFSDDRFDDQFADLLIFLI
        +LL+  DD  DD+  +LL+ L+
Subjt:  DLLIFSDDRFDDQFADLLIFLI

WP_217833387.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]9.4e-0857.75Show/hide
Query:  IFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDRHVGLLIFLDDRSTDLLI
        IFLDDR +GLLIFLDDR   L+IF    F DR   LL  LDDRP+GLLIFLDDR    L FL  R+++ ++
Subjt:  IFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDRHVGLLIFLDDRSTDLLI

XP_013783717.1 late embryogenesis abundant protein 76-like [Limulus polyphemus]5.5e-0832.12Show/hide
Query:  LLIFLDDRSVDLLIFVIDR-------FDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRHVGL
        L  FL+D+S +L  F+ D+        +D+S++L  FL+D+   L  FL+D+S +L  F +D+        +D S++L  FL+D+   L  FL+D+   L
Subjt:  LLIFLDDRSVDLLIFVIDR-------FDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRHVGL

Query:  LIFLDDRSTDLLIFSDDR-------FDDQFADLLIFL
          FL+D+S++L  F +D+        +D+ ++L+ FL
Subjt:  LIFLDDRSTDLLIFSDDR-------FDDQFADLLIFL

XP_020894441.1 cytosolic carboxypeptidase 2, partial [Exaiptasia diaphana]8.8e-0638.64Show/hide
Query:  DDRSVDLLIFVIDRFDDRSADLLIFL---DDRHVGLLIFL---DDRSTDLLIFSDDRFDDRSADLLIFL---DDRPVGLLIFL---DDRHVGLLIFL---
        DDR +D L+F +D  DDR  DL+ ++   DDR + L+ ++   DDR  D L+F  D  DDR  DL+ ++   DDR + L+ ++   DDR + L+ ++   
Subjt:  DDRSVDLLIFVIDRFDDRSADLLIFL---DDRHVGLLIFL---DDRSTDLLIFSDDRFDDRSADLLIFL---DDRPVGLLIFL---DDRHVGLLIFL---

Query:  DDRSTDLLIFSDDRFDDQFADLLIFLIGLLTY
        DDR  D L+F  D  DD+F DLL ++  L  Y
Subjt:  DDRSTDLLIFSDDRFDDQFADLLIFLIGLLTY

TrEMBL top hitse value%identityAlignment
A0A674B7D6 Histone deacetylase2.8e-0529.41Show/hide
Query:  LGLLIFLDDRSVDLLIFVIDR-------FDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRHV
        +  L  +DD S++ L+ + D         DD S + L  +DD  +  L+ +DD S + L+  DD         DD S + L  +DD  +  L  +DD  +
Subjt:  LGLLIFLDDRSVDLLIFVIDR-------FDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRHV

Query:  GLLIFLDDRSTDLLIFSDD
          L+ +DD S + L+  DD
Subjt:  GLLIFLDDRSTDLLIFSDD

A0A6F9AD32 Uncharacterized protein (Fragment)4.3e-0628.48Show/hide
Query:  QSDWSRQVVKSLQIDILGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDR
        QSD    V+     +++G+L+F  D  V +L+F      D    +L+F  D  VG+L+F  D    +L+F  D        +L+F  D   G+L+F  D 
Subjt:  QSDWSRQVVKSLQIDILGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDR

Query:  HVGLLIFLDDRSTDLLIFSDDRF-------DDQFADLLIF----LIGLLTY
         VG+L+F  D    +L+F  D          D    +L+F    ++G+L +
Subjt:  HVGLLIFLDDRSTDLLIFSDDRF-------DDQFADLLIF----LIGLLTY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTATAGTCATCAAAGTGACTGGTCTAGACAAGTGGTGAAATCACTGCAAATCGACATATTGGGCTTGTTGATTTTCTT
GGATGATCGGTCTGTTGACTTGTTGATCTTCGTGATCGATCGGTTTGATGATCGGTCTGCTGACTTGTTGATCTTCTTGGATGATCGGCATGTTGGCTTGTTGATCTTCT
TGGATGATCGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTGATTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTC
TTGGATGATCGGCATGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGATGATCAGTTTGCCGACTTGTTGATCTT
CTTGATCGGTCTACTGACTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGACCGTGGTGACCACCCCTGCAGGAAACTATAGTCATCAAAGTGACTGGTCTAGACAAGTGGTGAAATCACTGCAAATCGACATATTGGGCTTGTTGATTTTCTT
GGATGATCGGTCTGTTGACTTGTTGATCTTCGTGATCGATCGGTTTGATGATCGGTCTGCTGACTTGTTGATCTTCTTGGATGATCGGCATGTTGGCTTGTTGATCTTCT
TGGATGATCGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTGATTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTC
TTGGATGATCGGCATGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGATGATCAGTTTGCCGACTTGTTGATCTT
CTTGATCGGTCTACTGACTTATTGA
Protein sequenceShow/hide protein sequence
MTTVVTTPAGNYSHQSDWSRQVVKSLQIDILGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRHVGLLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIF
LDDRHVGLLIFLDDRSTDLLIFSDDRFDDQFADLLIFLIGLLTY