; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038787 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038787
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr2:26848339..26852736
RNA-Seq ExpressionLag0038787
SyntenyLag0038787
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]1.5e-13237.39Show/hide
Query:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA
        +VL +TIS+ Q AFV+ RQILDA L+ANE++ +  ++ +KGL+ K+D EKA+D V+W F+D ++  KGFG KWR WI GC+ S N+SI+ING+PRGK RA
Subjt:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA

Query:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK
        +R L QGDP+SPFLF ++ D  SR++ +A+    ++G  S  D + +SH+QFADDTI F + G +   +N+ ++++ F  +SG   N  K+ ILG+N   
Subjt:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK

Query:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG
          L   A   GC++G WP  YLGLPL G P A NFW P+++K+++RL  W  + +SKGGRLTLIQA LS++P+Y++SLF++P  +  ++E + R+FLW+G
Subjt:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG

Query:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ
          +  N   HLV+W ++    ++GGLG+ S+ ++N+AL AKW WRF  E N+LW ++IK+ YG  +N    K+      + PW+ I K     +      
Subjt:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ

Query:  LGNGEDTCFWTDPWISNLPLATRYPFFLS---------SLIAKQHR-------------------------------------------------SKMCG
        +GNGE   FW D W+    L   +P   S         +  A  H                                                  S  C 
Subjt:  LGNGEDTCFWTDPWISNLPLATRYPFFLS---------SLIAKQHR-------------------------------------------------SKMCG

Query:  MLRTSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP
          R SF IS     +   ++IWK   P K++FF+W  A+  INT D +Q+R P M LSP  C  CK + E   H+F  C ++ K W R++  LG  +++P
Subjt:  MLRTSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP

Query:  GRVEDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFKGMES-SLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL
            +LL+ +L     KG KA +L   +  A +WNIW ERN RIF+G     +   +  + F A  W  +S  F  Y Y+++      +L
Subjt:  GRVEDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFKGMES-SLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL

CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]9.0e-13036.8Show/hide
Query:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT
        VL  TI   Q AFV+ RQILDA L+ANEI+++  R  ++G++ K+D EKA+D V W FLDH+L  KGFG +WR W++GC+SSV++++L+NG  +G ++A+
Subjt:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT

Query:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS
        R L QGDP+SPFLF ++ D  SR+L KAE    + G++   +   +SH+QFADDTI F+    +   + +  V+  F HISG   NL K+ I G+N++++
Subjt:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS

Query:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG
         L   A  + CK   WP  YLGLPL G P    FW P+IE+I RRL  W  +++S GGR+TLIQ+ L+++P YFLSLF++P  +  +IE M R FLW G 
Subjt:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG

Query:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQL
         +      HLV W+ +  P  +GGLG   +  +N ALL KW WR+  E +ALW ++I +IYGS +N   +        + PWK I              +
Subjt:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQL

Query:  GNGEDTCFWTDPWISNLPLATRYPFFL----------SSLIAKQHRSKMCGMLRTSFGIS-------------------------NW---PTGYFLAKA-
        GNG+   FW D W    PL  +YP  L          SS++            R +   S                         +W   P+G F  K+ 
Subjt:  GNGEDTCFWTDPWISNLPLATRYPFFL----------SSLIAKQHRSKMCGMLRTSFGIS-------------------------NW---PTGYFLAKA-

Query:  ------------------IWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGR
                          +W    P KVK F+W +AHK +NT D+LQ R PY  LSP  C LC    ET  H+F  C      W R+       ++ P  
Subjt:  ------------------IWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGR

Query:  VEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW
        + D+L+S+  G  F     +LW N   A  W +WRERN RIF+    +    + S+ FL   W   S +F       L   W
Subjt:  VEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW

CAN72359.1 hypothetical protein VITISV_000131 [Vitis vinifera]3.1e-13037.04Show/hide
Query:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA
        +VL  TI   Q AFV+ RQILDA L+ANEI+++  R  ++G++ K+D EKA+D V W FLDH++  KGFG +WR W++GC+SSV++++L+NG  +G ++A
Subjt:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA

Query:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK
        +R L QGDP+SPFLF ++ D  SR+L KAE    + G++   +   +SH+QFADDTI F+    +   + +  V+  F HISG   NL K+ I G+N+++
Subjt:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK

Query:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG
        + L   A  + CK   WP  YLGLPL G P    FW P+IE+I RRL  W  +++S GGR+TLIQ+ L+++P YFLSLF++P  +  +IE M R FLW G
Subjt:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG

Query:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ
          +      HLV W+ +  P  +GGLG   +  +N ALL KW WR+  E +ALW ++I +IYGS +N   +        + PWK I              
Subjt:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ

Query:  LGNGEDTCFWTDPWISNLPLATRYPFFL----------SSLIAKQHRSKMCGMLRTSFGIS-------------------------NW---PTG------
        +GNG+   FW D W    PL  +YP  L          SS++            R +   S                         +W   P+G      
Subjt:  LGNGEDTCFWTDPWISNLPLATRYPFFL----------SSLIAKQHRSKMCGMLRTSFGIS-------------------------NW---PTG------

Query:  YFLA-------------KAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPG
        +FLA             K +W    P KVK F+W +AHK +NT D+LQ R PY  LSP  C LC    ET  H+F  C      W R+       ++ P 
Subjt:  YFLA-------------KAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPG

Query:  RVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW
         + D+LAS+  G  F     +LW N   A  W +WRERN RIF+    +    + S+ FL   W   S +F       L   W
Subjt:  RVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW

RVW53010.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.4e-13036.84Show/hide
Query:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT
        VL  TI   Q AFV+ RQILDA L+ANEI+++  R  ++G++ K+D EKA+D + W FLDH+L  KGF  +WR W++GC+SSV+Y++L+NG  +G ++A+
Subjt:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT

Query:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS
        R L QGDP+SPFLF ++ D  SR+L KAE    + G+R   +   +SH+QFADDTI F+   ++   + +  V+  F HISG   NL K+ I G+N++++
Subjt:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS

Query:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG
         L   A+ + CK   WP  YLGLPL G P A  FW P+IE+I RRL  W  +++S GGR+TLIQ+ L+++P YFLSLF++P  +  +IE M R FLW G 
Subjt:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG

Query:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQL
         +      HLV W+ +  P  +GGLG   +  +N ALL KW WR+  E +ALW ++I +IYGS +N   +  +     + PWK I              +
Subjt:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQL

Query:  GNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHR-SKMCGMLR---------------------------------------TSFGISNWPTGYFLAK
        G+G+   FW D W  + PL T+YP  LS +  K    S + G  R                                        S+ IS  P+G F  K
Subjt:  GNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHR-SKMCGMLR---------------------------------------TSFGISNWPTGYFLAK

Query:  A-------------------IWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP
        +                   +W    P KVK F+W +AHK +NT D+LQ R P+  LSP  C LC    ET  H+F  C      W R+       ++ P
Subjt:  A-------------------IWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP

Query:  GRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW
          + D+  ++  G        +LW +   A  W +WRERN RIF+    + G  + S+ FLA  W   S +F       L   W
Subjt:  GRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.2e-12936.9Show/hide
Query:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA
        +VL  TI   Q AFV+ RQILDA L+ANEI+++  R  ++G++ K+D EKA+D V W FLDH++  KGFG +WR W++GC+SSV++++L+NG  +G ++A
Subjt:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA

Query:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK
        +R L QGDP+SPFLF ++ D  SR+L KAE    + G++   +   +SH+QFADDTI F+    +   + +  V+  F HISG   NL K+ I G+N+++
Subjt:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK

Query:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG
        + L   A  + CK   WP  YLGLPL G P    FW P+IE+I RRL  W  +++S GGR+TLIQ+ L+++P YFLSLF++P  +  +IE M R FLW G
Subjt:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG

Query:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ
          +      HLV W+ +  P  +GGLG   +  +N ALL KW WR+  E +ALW ++I +IYGS +N   +        + PWK I              
Subjt:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ

Query:  LGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHR-SKMCGMLR---------------------------------------TSFGISN----WPTG
        +GNG+   FW D W    PL  +YP  L  +  K    S + G  R                                        S+ +S+        
Subjt:  LGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHR-SKMCGMLR---------------------------------------TSFGISN----WPTG

Query:  YFLA-------------KAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPG
        +FLA             K +W    P KVK F+W +AHK +NT D+LQ R PY  LSP  C LC    ET  H+F  C      W R+       ++ P 
Subjt:  YFLA-------------KAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPG

Query:  RVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW
         + D+LAS+  G  F     +LW N   A  W +WRERN RIF+    +    + S+ FL   W   S +F       L   W
Subjt:  RVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSW

TrEMBL top hitse value%identityAlignment
A0A803P465 Uncharacterized protein3.7e-13738.9Show/hide
Query:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT
        VL  TI E Q+AFVE RQILD+ L+ANE + D+  R + GL+ K+D EKA+D+V+W F+D +L  KGFG  WR WIKGC+SS ++S+ IN  PRGK   +
Subjt:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT

Query:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS
        R L QGDP+SPFLF ++ D   R+  KA + G I+G+    + + +SH+QFADDTI F E  ++ S   + +VVE F  ISG   NL K+++LG+ +D+ 
Subjt:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS

Query:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG
        ++   A +IGC++G WP  YLG+PL G+P   +FW P+++K  +RL  W  +F+SKGGRLTLIQ+ LS+LP YFLSLF+ P+ +   +E M R FLW+G 
Subjt:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG

Query:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNL---KRSSLAKSKGPWKNIVKHRNLIISRIVHQL
          +     HLV W+++  P  +GGLG+  +  +NK+LL KW WRF  E+N+LW +++ + YG   NL   K+ S    KGPW++I    +  +  +  +L
Subjt:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNL---KRSSLAKSKGPWKNIVKHRNLIISRIVHQL

Query:  GNGEDTCFWTDPWISNLPLATRYPFF----------------------------------------LSSLIAKQHRSKMCGMLRTSFGISNW---PTGYF
        G G+   FW D WI + PL + +P                                          L SLI+   + +   +L  S     W   P+G F
Subjt:  GNGEDTCFWTDPWISNLPLATRYPFF----------------------------------------LSSLIAKQHRSKMCGMLRTSFGISNW---PTGYF

Query:  -------------------LAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSY
                             K++WK   P KVK F W LA + +N  D +QKR P++ +SPG C  CK   E+  H+F  C F G+ W  ++   G S+
Subjt:  -------------------LAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSY

Query:  ILPGRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESS
        ++P  V  L+AS L G      K  LW +   A  W +W ERN RIF+G   S
Subjt:  ILPGRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESS

A0A803QEA6 Uncharacterized protein8.2e-13737.72Show/hide
Query:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT
        VL  TISE Q+AFVE RQILD+ L+ANE + D+  R +KG ++K+D EKA+D+VDW FLD +L  KGFG +WR WI+GCVSS ++SI INGR RGK   +
Subjt:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT

Query:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS
        R L QGDP+SPFLF MI D   R++ KA    ++ G++   D++ +SH+QFADDT+ F +  D+ S   + KVV+ F  ISG   NL K+++LG+ +++ 
Subjt:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS

Query:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG
         +   A+ IGC++G WP TYLG+ L G+P  R+FW P+++K  +R+  W  SF+S+GGRLTLIQ+ LS+LP Y+LSLF+ PK +  E+E M R F W+GG
Subjt:  VLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGG

Query:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNL---KRSSLAKSKGPWKNIVKHRNLIISRIVHQL
                HLV W+++  P  +GGL +  +  +NK LL KW WRF  E N+LW K+IK+ YG   N    K+      +GPWK+I    +     +  ++
Subjt:  MQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNL---KRSSLAKSKGPWKNIVKHRNLIISRIVHQL

Query:  GNGEDTCFWTDPWISNLPLATRYPFF-------------------------------------------LSSLIAKQHRSKM--------------CGML
        GNGE   FW D W+    L  ++P                                             L+ L+ K    ++              CG+ 
Subjt:  GNGEDTCFWTDPWISNLPLATRYPFF-------------------------------------------LSSLIAKQHRSKM--------------CGML

Query:  RTSFGISNWPTG------YFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWS
         +    S W T        F  K +WK   P KVK F W +A   +N    LQK+ P+M +SPG C  CK   E   H+F  C  A   W  +M      
Subjt:  RTSFGISNWPTG------YFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWS

Query:  YILPGRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL
        + +P  V+ +L S + G         LW     +  W +W ERNNRIF+G ESS+   +  + F   +W   +  F + S+  L   W  LL
Subjt:  YILPGRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.1e-13337.85Show/hide
Query:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA
        +VL +TIS+ Q AFV+ RQILDA L+ANE++ +  ++K+KGL+ K+D EKA+D V+W F+D ++  KGFG KWR WI GC+ SVN+SI+ING+PRGK RA
Subjt:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA

Query:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK
        +R L QGDP+SPFLF ++ D  SRL+ +A+    ++G  S  D + +SH+QFADDTI   + G +   +N+ ++++ F  +SG   N  K+ ILG+N   
Subjt:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK

Query:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG
         VL   A   GC++G WP  YLGLPL G P A NFW P++EK+++RL  W  + +SKGGRLTLIQA LS++P+Y++SLF++P  +  ++E + R+FLW+G
Subjt:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG

Query:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKNIVKHRNLIISRIVHQLGN
                 HLV+WE++    ++GGLG+ S+ ++ +AL AKW WRF  E N+LW ++IK+ YG  +N           PW+ I K  N  +      +GN
Subjt:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKNIVKHRNLIISRIVHQLGN

Query:  GEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMC----------------------------------GMLR------------------------
        GE   FW D W+    L   +P  LSSL  ++++S  C                                  G +R                        
Subjt:  GEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMC----------------------------------GMLR------------------------

Query:  TSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGRV
         SF +S     +    +IWK   P K++FF+W  A+  INT D +Q+R P M LSP  C LCK + E   H+F  C ++ + W +++  LG  +++P   
Subjt:  TSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGRV

Query:  EDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFKG-MESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL
         +LL+ +L     KG +A +L   +  A +WNIW ERN RIF+G +   +   +  + F A  W  +S  F  Y Y+++      +L
Subjt:  EDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFKG-MESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)1.1e-13339.26Show/hide
Query:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA
        +VL +TIS+ Q AFV+ RQILDA L+ANE++ +  ++K+KGL+ K+D EKA+D V+W F+D +L  KGFG KWR WI GC+ SVN+SI+ING+PRGK RA
Subjt:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA

Query:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK
        +R L QGDP+SPFLF ++ D  SR++ +A+    ++G  S  D + +SH+QFADDTI   + G +   +N+ ++++ F  +SG   N  K+ ILG+N   
Subjt:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK

Query:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG
          L   A   GC++G WP  YLGLPL G P A NFW P+++K+++RL  W  + +SKGGRLTLIQA LS++P+Y++SLF++P  +  ++E + R+FLW+G
Subjt:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG

Query:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ
             N   HLV+WE++    ++GGLG+ S+ ++N+AL AKW WRF  E N+LW ++IK+ YG  +N    K+      + PW+ I K  N  +      
Subjt:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ

Query:  LGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMC----------------------------------GMLR---------------------
        +GNGE   FW D W+    L   +P  LSSL  ++++S  C                                  G +R                     
Subjt:  LGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMC----------------------------------GMLR---------------------

Query:  ---TSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP
            SF +S     +    +IWK   P K++FF+W  A+  INT D +Q+R P M LSP  C LCK + E   H+F  C ++ + W R++  LG  +++P
Subjt:  ---TSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP

Query:  GRVEDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFKG
            +LL+ +L     KG +A +L   +  A +WNIW ERN RIF+G
Subjt:  GRVEDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFKG

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)1.4e-13339.32Show/hide
Query:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA
        +VL +TIS+ Q AFV+ RQILDA L+ANE++ +  ++K+KGL+ K+D EKA+D V+W F+D ++  KGFG KWR WI GC+ SVN+SI+ING+PRGK RA
Subjt:  QVLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRA

Query:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK
        +R L QGDP+SPFLF ++ D  SRL+ +A+    ++G  S  D + +SH+QFADDTI   + G +   +N+ ++++ F  +SG   N  K+ ILG+N   
Subjt:  TRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDK

Query:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG
         VL   A   GC++G WP  YLGLPL G P A NFW P++EK+++RL  W  + +SKGGRLTLIQA LS++P+Y++SLF++P  +  ++E + R+FLW+G
Subjt:  SVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKG

Query:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ
                 HLV+WE++    ++GGLG+ S+ ++N+AL AKW WRF  E N+LW ++IK+ YG  +N    KR      + PW+ I K  N  +      
Subjt:  GMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTN---LKRSSLAKSKGPWKNIVKHRNLIISRIVHQ

Query:  LGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMC----------------------------------GMLR---------------------
        +GNGE   FW D W+    L   +P  LSSL  ++++S  C                                  G +R                     
Subjt:  LGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMC----------------------------------GMLR---------------------

Query:  ---TSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP
            SF +S     +    +IWK   P K++FF+W  A+  INT D +Q+R P M LSP  C LCK + E   H+F  C ++ + W +++  LG  +++P
Subjt:  ---TSFGISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILP

Query:  GRVEDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFK
            +LL+ +L     KG +A +L   +  A +WNIW ERN RIF+
Subjt:  GRVEDLLASSLTGHPFKGIKA-LLWMNINRACYWNIWRERNNRIFK

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein1.6e-1724.16Show/hide
Query:  IINDWNRRKKKG-LIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTK
        +I   NR K K  +II +D EKAFDK+   F+   L   G    +   I+        +I++NG+            QG P+SP LF ++++  +R + +
Subjt:  IINDWNRRKKKG-LIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTK

Query:  AEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKSVLEIFALQIGCKIGDWPSTYLGLPLNG
         +    I G +   + + +S   FADD I++ E     SA N+ K++ NF  +SG+  N+QK++    N ++        ++   I      YLG+ L  
Subjt:  AEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKSVLEIFALQIGCKIGDWPSTYLGLPLNG

Query:  APN--ARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSL--FQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQG
              +  + P++++IK     W     S  GR+ +++  +     Y  +    +LP     E+E     F+W       N     +    L      G
Subjt:  APN--ARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSL--FQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQG

Query:  GLGLHSMVDKNKALLAKWTWRFDPERN
        G+ L       KA + K  W +   R+
Subjt:  GLGLHSMVDKNKALLAKWTWRFDPERN

P0C2F6 Putative ribonuclease H protein At1g657505.3e-3224.38Show/hide
Query:  IIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKAL
        I+E++  R+  W    +S  GRLTL +A LS++P + +S   LP+ I   ++ + R+FLW  G        HLVKW K+  P  +GGLG+ +    N+AL
Subjt:  IIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKAL

Query:  LAKWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKN-----IVKHRNLIISRIVHQLGNGEDTCFWTDPWISNLPLAT----RYPFFLSSLI
        ++K  WR   E+N+LW  +++  Y     ++ S     KG W +      +  R+++   +    G+G+   FWTD W+S  PL        P    +++
Subjt:  LAKWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKN-----IVKHRNLIISRIVHQLGNGEDTCFWTDPWISNLPLAT----RYPFFLSSLI

Query:  AK------------------------QHRSKMCGMLRTSFGISNW---PTGYFLAKA---------------------IWKDNYPKKVKFFLWELAHKAI
        AK                        + R+ +  ++  +    +W     G F  ++                     +WK   P++VK FLW + ++A+
Subjt:  AK------------------------QHRSKMCGMLRTSFGISNW---PTGYFLAKA---------------------IWKDNYPKKVKFFLWELAHKAI

Query:  NTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNR
         T++   +R  ++  S   C +CK   E+ +H+   CP     W R++            + + L  +L      G + + W  I     W  W+ R   
Subjt:  NTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGRVEDLLASSLTGHPFKGIKALLWMNINRACYWNIWRERNNR

Query:  IF
        IF
Subjt:  IF

P11369 LINE-1 retrotransposable element ORF2 protein3.6e-1221.98Show/hide
Query:  NQVLPSTISEY--------QAAFVENRQILDASLLANEIINDWNRRKKKG-LIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILI
        N++L + I E+        Q  F+   Q       +  +I+  N+ K K  +II LD EKAFDK+   F+  +L   G    + + IK   S    +I +
Subjt:  NQVLPSTISEY--------QAAFVENRQILDASLLANEIINDWNRRKKKG-LIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILI

Query:  NGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQK
        NG     I       QG P+SP+LF ++++  +R + + +    I G +   + + IS +  ADD I++      +S   +  ++ +F  + G+  N  K
Subjt:  NGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQK

Query:  TEILGLNVDKSVLEIFALQIGCKIGDWPSTYLGLPLNGAPN---ARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSL--FQLPKKI
        +       +K   +         I      YLG+ L         +NF   + ++IK  L  W     S  GR+ +++  +     Y  +    ++P + 
Subjt:  TEILGLNVDKSVLEIFALQIGCKIGDWPSTYLGLPLNGAPN---ARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSL--FQLPKKI

Query:  GLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNA-LWRKL
          E+E     F+W       N+    +    L      GG+ +  +    +A++ K  W +  +R    W ++
Subjt:  GLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNA-LWRKL

P14381 Transposon TX1 uncharacterized 149 kDa protein9.7e-1024.55Show/hide
Query:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT
        VL   I   Q+  V  R I D   L  ++++   R       + LD EKAFD+VD  +L   L A  FG ++  ++K   +S    + IN      +   
Subjt:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRAT

Query:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS
        R + QG P+S  L+ + ++ F  LL K      + G      ++ +    +ADD IL  +  D        +  E +   S    N  K+      + + 
Subjt:  RVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKS

Query:  VLEIFALQIGCKIGDWPS---TYLGLPLNGA--PNARNFWMPIIEKIKRRLMNWG--ASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYR
         L++  L    +   W S    YLG+ L+    P ++NF + + E +  RL  W   A  +S  GR  +I   +++   Y L      ++   +I+    
Subjt:  VLEIFALQIGCKIGDWPS---TYLGLPLNGA--PNARNFWMPIIEKIKRRLMNWG--ASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYR

Query:  SFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGL
         FLW G         H V       P+ +GG G+
Subjt:  SFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGL

P92555 Uncharacterized mitochondrial protein AtMg012508.2e-0942.65Show/hide
Query:  LINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDT
        +ING P+G +  +R L QGDP+SP+LFI+  +  S L  +A+  G + G R   ++  I+H+ FADDT
Subjt:  LINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDT

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-2332.99Show/hide
Query:  GDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKW
        G  P  YLGLPL       + + P++EKI+ R+  W A  +S  GRL LI + + +L  +++S F+LP     EI+S+  SFLW G     N     V W
Subjt:  GDWPSTYLGLPLNGAPNARNFWMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKW

Query:  EKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKNIVKHRNLIISRIVHQLGNGEDTCFWTDPW
          +  P D+GGLG+ S+ + NK               + W     +I G+ T             WK I+KHR L    + H + NG +T FW D W
Subjt:  EKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKNIVKHRNLIISRIVHQLGNGEDTCFWTDPW

AT4G20520.1 RNA binding;RNA-directed DNA polymerases6.7e-0631.08Show/hide
Query:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRK--KKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKW
        ++ + I   QA+F+  R   D  +   E ++   R+K  K  +++KLD+EKA+D++ W +L+  L + GF   W
Subjt:  VLPSTISEYQAAFVENRQILDASLLANEIINDWNRRK--KKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKW

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-1127.89Show/hide
Query:  LPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNLKR
        LPTY ++ F LPK +  +I S+   F W+   +      H   W+ L     +GG+G   +   N ALL K  WR      +L  K+ K+ Y   ++   
Subjt:  LPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLAKWTWRFDPERNALWRKLIKAIYGSPTNLKR

Query:  SSL-AKSKGPWKNIVKHRNLIISRIVHQLGNGEDTCFWTDPWISNLP
        + L ++    WK+I   + ++       +GNGED   W   W+ + P
Subjt:  SSL-AKSKGPWKNIVKHRNLIISRIVHQLGNGEDTCFWTDPWISNLP

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)5.8e-1042.65Show/hide
Query:  LINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDT
        +ING P+G +  +R L QGDP+SP+LFI+  +  S L  +A+  G + G R   ++  I+H+ FADDT
Subjt:  LINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAEANGTINGYRSVFDNLSISHIQFADDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGAACTCCTCGATCGTCTCTCTAAGGCCTCTGTGTCTGGCAAACTGCAAACCGAACGAGCCAAAGAACTCATCCCAAATTGCAAACCGAAAAATGAA
AATGCTCACTTCTATAGCCAAAAAGTGAGCATTTTCATTTTTCCTAGGTCTATGAAAATTTTGGGTAGGCTGTGTTTATGTCATTATGTTGTGGACACTATGATC
AACATTGCATCTGGAGATGCATATGGCAATCAGGTGTTGCCCTCCACAATCTCTGAATACCAAGCTGCCTTTGTAGAAAATAGACAGATTCTTGATGCTTCTCTC
TTAGCTAACGAGATCATTAACGACTGGAACCGTAGAAAGAAAAAGGGGTTGATCATAAAGTTAGACATTGAAAAAGCCTTTGACAAAGTGGACTGGTGCTTTCTC
GACCATATTCTTTTTGCCAAAGGCTTCGGTACAAAATGGAGATCATGGATCAAGGGTTGTGTGTCATCCGTAAACTACTCGATTCTAATTAATGGCCGGCCTAGG
GGAAAGATTAGAGCTACAAGGGTTCTTGGACAAGGAGATCCGATATCTCCTTTCCTATTTATTATGATTATGGACTGTTTTAGTCGTCTCCTCACCAAAGCTGAA
GCAAATGGCACCATCAATGGTTATAGATCCGTATTTGACAACCTCAGCATCAGCCACATTCAATTTGCAGACGATACTATTTTATTCACAGAATTTGGGGATGAT
TCTTCGGCCATAAACATGTTTAAAGTGGTTGAAAATTTCGAGCATATATCTGGACACAACACCAACTTGCAAAAAACGGAAATATTGGGTTTAAATGTGGACAAA
TCTGTTTTGGAGATCTTTGCCCTCCAAATAGGATGCAAAATAGGGGATTGGCCTAGTACTTATCTGGGATTGCCTCTTAATGGAGCTCCAAATGCTAGAAACTTC
TGGATGCCTATTATTGAAAAGATCAAACGAAGGCTAATGAATTGGGGAGCATCTTTTATATCCAAAGGGGGTCGATTAACCCTCATTCAGGCTACATTATCAAAC
CTCCCTACATACTTTTTATCCCTTTTCCAATTACCAAAAAAGATTGGTCTAGAGATTGAAAGTATGTATAGGTCTTTTCTTTGGAAAGGAGGGATGCAGACTCAT
AATCATGTGCATCACCTTGTCAAATGGGAAAAGCTCATACATCCCATTGATCAAGGGGGCCTCGGCTTACATTCCATGGTGGACAAAAACAAAGCCCTTCTGGCT
AAGTGGACTTGGAGATTCGATCCGGAAAGGAATGCTCTTTGGAGAAAACTTATTAAAGCCATCTATGGATCTCCCACAAACTTGAAAAGGTCTTCCCTAGCAAAA
TCCAAAGGACCGTGGAAAAATATTGTCAAGCACCGCAACCTCATTATCAGCCGTATAGTCCACCAGCTTGGAAATGGAGAGGATACTTGCTTCTGGACAGACCCT
TGGATAAGCAACTTGCCGTTGGCCACTAGATACCCCTTCTTTTTAAGCTCTCTCATTGCAAAACAGCATCGGTCAAAGATGTGTGGAATGTTACGAACCTCTTTT
GGGATCTCAAATTGGCCTACTGGATACTTTTTGGCTAAGGCAATCTGGAAAGATAACTACCCCAAGAAAGTCAAATTTTTCTTATGGGAGCTAGCTCACAAAGCC
ATCAACACCAAAGACATCTTGCAAAAGCGCATGCCATATATGCCTCTTTCCCCCGGGAGGTGTTCTTTATGCAAAGCGGATGACGAAACACAGATTCATATTTTT
GCTTCTTGCCCTTTTGCGGGGAAGTTTTGGTCGAGAATTATGTATCATCTTGGTTGGTCCTATATTCTCCCAGGTCGAGTGGAGGATCTCCTTGCTTCATCTTTG
ACGGGCCACCCTTTTAAGGGTATCAAAGCTCTATTATGGATGAATATCAACAGAGCCTGCTATTGGAACATTTGGAGAGAAAGAAATAATAGAATTTTTAAAGGA
ATGGAGTCCTCTCTTGGAGCTTTTTTTGGTTCTGTTATTTTCCTGGCTATTACTTGGTGTAAACTCTCTCCCTTATTCTCATCATACTCTTATGCATCCCTCACC
AATAGTTGGGAATGCCTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGGAACTCCTCGATCGTCTCTCTAAGGCCTCTGTGTCTGGCAAACTGCAAACCGAACGAGCCAAAGAACTCATCCCAAATTGCAAACCGAAAAATGAA
AATGCTCACTTCTATAGCCAAAAAGTGAGCATTTTCATTTTTCCTAGGTCTATGAAAATTTTGGGTAGGCTGTGTTTATGTCATTATGTTGTGGACACTATGATC
AACATTGCATCTGGAGATGCATATGGCAATCAGGTGTTGCCCTCCACAATCTCTGAATACCAAGCTGCCTTTGTAGAAAATAGACAGATTCTTGATGCTTCTCTC
TTAGCTAACGAGATCATTAACGACTGGAACCGTAGAAAGAAAAAGGGGTTGATCATAAAGTTAGACATTGAAAAAGCCTTTGACAAAGTGGACTGGTGCTTTCTC
GACCATATTCTTTTTGCCAAAGGCTTCGGTACAAAATGGAGATCATGGATCAAGGGTTGTGTGTCATCCGTAAACTACTCGATTCTAATTAATGGCCGGCCTAGG
GGAAAGATTAGAGCTACAAGGGTTCTTGGACAAGGAGATCCGATATCTCCTTTCCTATTTATTATGATTATGGACTGTTTTAGTCGTCTCCTCACCAAAGCTGAA
GCAAATGGCACCATCAATGGTTATAGATCCGTATTTGACAACCTCAGCATCAGCCACATTCAATTTGCAGACGATACTATTTTATTCACAGAATTTGGGGATGAT
TCTTCGGCCATAAACATGTTTAAAGTGGTTGAAAATTTCGAGCATATATCTGGACACAACACCAACTTGCAAAAAACGGAAATATTGGGTTTAAATGTGGACAAA
TCTGTTTTGGAGATCTTTGCCCTCCAAATAGGATGCAAAATAGGGGATTGGCCTAGTACTTATCTGGGATTGCCTCTTAATGGAGCTCCAAATGCTAGAAACTTC
TGGATGCCTATTATTGAAAAGATCAAACGAAGGCTAATGAATTGGGGAGCATCTTTTATATCCAAAGGGGGTCGATTAACCCTCATTCAGGCTACATTATCAAAC
CTCCCTACATACTTTTTATCCCTTTTCCAATTACCAAAAAAGATTGGTCTAGAGATTGAAAGTATGTATAGGTCTTTTCTTTGGAAAGGAGGGATGCAGACTCAT
AATCATGTGCATCACCTTGTCAAATGGGAAAAGCTCATACATCCCATTGATCAAGGGGGCCTCGGCTTACATTCCATGGTGGACAAAAACAAAGCCCTTCTGGCT
AAGTGGACTTGGAGATTCGATCCGGAAAGGAATGCTCTTTGGAGAAAACTTATTAAAGCCATCTATGGATCTCCCACAAACTTGAAAAGGTCTTCCCTAGCAAAA
TCCAAAGGACCGTGGAAAAATATTGTCAAGCACCGCAACCTCATTATCAGCCGTATAGTCCACCAGCTTGGAAATGGAGAGGATACTTGCTTCTGGACAGACCCT
TGGATAAGCAACTTGCCGTTGGCCACTAGATACCCCTTCTTTTTAAGCTCTCTCATTGCAAAACAGCATCGGTCAAAGATGTGTGGAATGTTACGAACCTCTTTT
GGGATCTCAAATTGGCCTACTGGATACTTTTTGGCTAAGGCAATCTGGAAAGATAACTACCCCAAGAAAGTCAAATTTTTCTTATGGGAGCTAGCTCACAAAGCC
ATCAACACCAAAGACATCTTGCAAAAGCGCATGCCATATATGCCTCTTTCCCCCGGGAGGTGTTCTTTATGCAAAGCGGATGACGAAACACAGATTCATATTTTT
GCTTCTTGCCCTTTTGCGGGGAAGTTTTGGTCGAGAATTATGTATCATCTTGGTTGGTCCTATATTCTCCCAGGTCGAGTGGAGGATCTCCTTGCTTCATCTTTG
ACGGGCCACCCTTTTAAGGGTATCAAAGCTCTATTATGGATGAATATCAACAGAGCCTGCTATTGGAACATTTGGAGAGAAAGAAATAATAGAATTTTTAAAGGA
ATGGAGTCCTCTCTTGGAGCTTTTTTTGGTTCTGTTATTTTCCTGGCTATTACTTGGTGTAAACTCTCTCCCTTATTCTCATCATACTCTTATGCATCCCTCACC
AATAGTTGGGAATGCCTTTTGTAA
Protein sequenceShow/hide protein sequence
MGKELLDRLSKASVSGKLQTERAKELIPNCKPKNENAHFYSQKVSIFIFPRSMKILGRLCLCHYVVDTMINIASGDAYGNQVLPSTISEYQAAFVENRQILDASL
LANEIINDWNRRKKKGLIIKLDIEKAFDKVDWCFLDHILFAKGFGTKWRSWIKGCVSSVNYSILINGRPRGKIRATRVLGQGDPISPFLFIMIMDCFSRLLTKAE
ANGTINGYRSVFDNLSISHIQFADDTILFTEFGDDSSAINMFKVVENFEHISGHNTNLQKTEILGLNVDKSVLEIFALQIGCKIGDWPSTYLGLPLNGAPNARNF
WMPIIEKIKRRLMNWGASFISKGGRLTLIQATLSNLPTYFLSLFQLPKKIGLEIESMYRSFLWKGGMQTHNHVHHLVKWEKLIHPIDQGGLGLHSMVDKNKALLA
KWTWRFDPERNALWRKLIKAIYGSPTNLKRSSLAKSKGPWKNIVKHRNLIISRIVHQLGNGEDTCFWTDPWISNLPLATRYPFFLSSLIAKQHRSKMCGMLRTSF
GISNWPTGYFLAKAIWKDNYPKKVKFFLWELAHKAINTKDILQKRMPYMPLSPGRCSLCKADDETQIHIFASCPFAGKFWSRIMYHLGWSYILPGRVEDLLASSL
TGHPFKGIKALLWMNINRACYWNIWRERNNRIFKGMESSLGAFFGSVIFLAITWCKLSPLFSSYSYASLTNSWECLL