; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0038807 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038807
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr2:27273619..27276282
RNA-Seq ExpressionLag0038807
SyntenyLag0038807
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.0e-10351.65Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNT QRKGE V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELAT AHDM+LSIA+R  +D ++   R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              + ES++V  T  KS SK K   +  +H        TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSK-------YQRKKN--------------PKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHK
        VE+CFVLK+LI KLA E KIELD+DEVAQ+N V +   S        Y ++K+               +K      ++KE     +     EF  ++F +
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSK-------YQRKKN--------------PKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHK

Query:  KEKGNFV------TSYCIDV-------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFD
              +      T+  ++V       EE+DNS + +QRTSVFD IKP TTR SVFQR+SM   +EENQC   T  + SAF+RLS+S SKK +PST  FD
Subjt:  KEKGNFV------TSYCIDV-------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFD

Query:  RLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK
        RLK+TNDQ +R+   L+   F E N D K+ S + SRMKRK SV INTEGSL  K
Subjt:  RLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK

KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.3e-10955.07Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D ++P  R +    ++T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              I+ES+VV+ T  KS SK K     R+ +G      TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+  KVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDVE
        VE+CFVLK+LILKLA E KIELD+DEVAQ+N          +   NP K      + ++F Q R+ +TL EF  ++F + +    +       +  ++V+
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDVE

Query:  -------EVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF
               EV+NS +  QRTSVFDRIKP TTR SVFQR+S+   EEENQC      R S  +RLS+ST KK +PSTS FDRLK+TNDQ +R+  + +   F
Subjt:  -------EVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF

Query:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK
         E N D K+ S + SRMKRK  V INTEGSL  K
Subjt:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK

KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-10554.15Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNTKQ  GE V+NYINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELAT AHDMELSIA+R  +  ++   R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              + ES+VV  T  KS SK K   +  +H        TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+L  CKRP +  KVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDV-
        VE+CFVLK+LILKLA E KI+LD+DE        IKGK                   ++F QPR+ +TL EF  ++F +      +      T+  ++V 
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDV-

Query:  ------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF
              EEVDNS + +QRTSVFDRIKP TTR  VFQR+SM   EEENQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+ NDQ +R+  +L+   F
Subjt:  ------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF

Query:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK
         E N D K+ S I S   RK SV IN EGSL  K
Subjt:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK

TYK03695.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.2e-10348.23Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSI +R  +D ++P  R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              I+ES+VV+ T  KS SK K     R+ +G      TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LPKCKRP++ EKVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTI-----------------------------------------------------------------
        VE+CFVLK+LILKLA E KIEL++DEVAQ+N V I                                                                 
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTI-----------------------------------------------------------------

Query:  -----------KG----KSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTF---HKKEKGNFVTSYCIDVEEVDN---SKKD-------EQRTS
                   KG    K K +R K    P+P + + ++F Q R+ +TL EF  ++F   H +E     T +   + EV+N   S K+        QRTS
Subjt:  -----------KG----KSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTF---HKKEKGNFVTSYCIDVEEVDN---SKKD-------EQRTS

Query:  VFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRK
        VFDRIKP TTR SVFQR+SM   EEENQC      R S F+RLS+S SKK +PSTS FDRLK+TNDQ +R+  +L+   F E N D K+ S + SRMKRK
Subjt:  VFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRK

Query:  FSVLINTE
          V INT+
Subjt:  FSVLINTE

TYK16519.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.7e-10439.54Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNTKQRKGE V++YI RWRA+SLDCKD+LTELS+V+MC Q MHWELLYIL+GIKPRTFEELAT AHDMELSIA+R  +D ++   R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              + ES+ V  T  KS SK K   +  +H        TL+ERQKK+YPFP++D+ DMLEQL+E QLI+LP+CKR E++ KVDD  YCKY+RVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFVTSYCIDVEEVDNSK
        VE+CFVLK+LILKLA E KIELD+DEVAQ+N V +   S                                                             
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFVTSYCIDVEEVDNSK

Query:  KDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSI
                     PP+          ++  + E+     T      F+ + V   +K   S          N Q K           +E + D+  +   
Subjt:  KDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSI

Query:  LSRMKRKFSVLINTEGSLKEKGHDLKYCKYHRVIGHQVERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQP
        ++  K + +  + T     +K                                             ++   I  K K +R K   KP+P + + + F QP
Subjt:  LSRMKRKFSVLINTEGSLKEKGHDLKYCKYHRVIGHQVERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQP

Query:  RQPVTLNEFFSKTF---HKKEKGNFVTSYCIDV----------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRL
        R+ +TL EF  + F   H +E       +  ++          EEVDNS + +QRTSVFDRIKP TTR  VFQR+SM   EEENQC  ST  R SAF+RL
Subjt:  RQPVTLNEFFSKTF---HKKEKGNFVTSYCIDV----------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRL

Query:  SVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIIFTNPTSQGSDQDHDEDK
        S+STSKK +PSTS FDRLK+TN+Q KR+  + +   F E N D K+ S + SRMKRK SV INTEGSL VKP  IIFTNP ++G ++  DE+K
Subjt:  SVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIIFTNPTSQGSDQDHDEDK

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein5.1e-10451.65Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNT QRKGE V++YINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELAT AHDM+LSIA+R  +D ++   R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              + ES++V  T  KS SK K   +  +H        TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+LP+CKRPE++ KVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSK-------YQRKKN--------------PKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHK
        VE+CFVLK+LI KLA E KIELD+DEVAQ+N V +   S        Y ++K+               +K      ++KE     +     EF  ++F +
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSK-------YQRKKN--------------PKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHK

Query:  KEKGNFV------TSYCIDV-------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFD
              +      T+  ++V       EE+DNS + +QRTSVFD IKP TTR SVFQR+SM   +EENQC   T  + SAF+RLS+S SKK +PST  FD
Subjt:  KEKGNFV------TSYCIDV-------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFD

Query:  RLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK
        RLK+TNDQ +R+   L+   F E N D K+ S + SRMKRK SV INTEGSL  K
Subjt:  RLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK

A0A5A7URH1 Ty3-gypsy retrotransposon protein4.0e-10955.07Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSIA+R  +D ++P  R +    ++T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              I+ES+VV+ T  KS SK K     R+ +G      TLKERQ+K+YPFPD+D+ DMLEQLLE QLI+LP+CKRPE+  KVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDVE
        VE+CFVLK+LILKLA E KIELD+DEVAQ+N          +   NP K      + ++F Q R+ +TL EF  ++F + +    +       +  ++V+
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDVE

Query:  -------EVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF
               EV+NS +  QRTSVFDRIKP TTR SVFQR+S+   EEENQC      R S  +RLS+ST KK +PSTS FDRLK+TNDQ +R+  + +   F
Subjt:  -------EVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF

Query:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK
         E N D K+ S + SRMKRK  V INTEGSL  K
Subjt:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK

A0A5A7VFA5 Ty3-gypsy retrotransposon protein1.2e-10554.15Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNTKQ  GE V+NYINRWRA+SLDCKD+LTELS+VEMC QGMHWELLYIL+GIKPRTFEELAT AHDMELSIA+R  +  ++   R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              + ES+VV  T  KS SK K   +  +H        TL+ERQKK+YPFPD+D+ DMLEQL+E QLI+L  CKRP +  KVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDV-
        VE+CFVLK+LILKLA E KI+LD+DE        IKGK                   ++F QPR+ +TL EF  ++F +      +      T+  ++V 
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFV------TSYCIDV-

Query:  ------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF
              EEVDNS + +QRTSVFDRIKP TTR  VFQR+SM   EEENQC  ST  R SAF+RLS+STSKK +PSTS FDRLK+ NDQ +R+  +L+   F
Subjt:  ------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLF

Query:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK
         E N D K+ S I S   RK SV IN EGSL  K
Subjt:  DEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEK

A0A5D3BX77 Retrotransposon gag protein2.5e-10348.23Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNT+Q+KGELV++YINRWRA+SLDCKDRLTELS+VEMC QGMHW LLYIL+GIKPRTFEELAT AHDMELSI +R  +D ++P  R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              I+ES+VV+ T  KS SK K     R+ +G      TLKERQ+K+YPF D+D+ DMLEQLLE QLI+LPKCKRP++ EKVDD  YCKYHRVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEK-----RQMNG--AHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTI-----------------------------------------------------------------
        VE+CFVLK+LILKLA E KIEL++DEVAQ+N V I                                                                 
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTI-----------------------------------------------------------------

Query:  -----------KG----KSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTF---HKKEKGNFVTSYCIDVEEVDN---SKKD-------EQRTS
                   KG    K K +R K    P+P + + ++F Q R+ +TL EF  ++F   H +E     T +   + EV+N   S K+        QRTS
Subjt:  -----------KG----KSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTF---HKKEKGNFVTSYCIDVEEVDN---SKKD-------EQRTS

Query:  VFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRK
        VFDRIKP TTR SVFQR+SM   EEENQC      R S F+RLS+S SKK +PSTS FDRLK+TNDQ +R+  +L+   F E N D K+ S + SRMKRK
Subjt:  VFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRK

Query:  FSVLINTE
          V INT+
Subjt:  FSVLINTE

A0A5D3D209 Retrotransposon gag protein2.3e-10439.54Show/hide
Query:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-
        M ELTNTKQRKGE V++YI RWRA+SLDCKD+LTELS+V+MC Q MHWELLYIL+GIKPRTFEELAT AHDMELSIA+R  +D ++   R +     +T 
Subjt:  MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEET-

Query:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ
              + ES+ V  T  KS SK K   +  +H        TL+ERQKK+YPFP++D+ DMLEQL+E QLI+LP+CKR E++ KVDD  YCKY+RVI H 
Subjt:  ------IEESIVVNTTLPKSSSKEKRQMNGAHH-------LTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQ

Query:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFVTSYCIDVEEVDNSK
        VE+CFVLK+LILKLA E KIELD+DEVAQ+N V +   S                                                             
Subjt:  VERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFVTSYCIDVEEVDNSK

Query:  KDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSI
                     PP+          ++  + E+     T      F+ + V   +K   S          N Q K           +E + D+  +   
Subjt:  KDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSI

Query:  LSRMKRKFSVLINTEGSLKEKGHDLKYCKYHRVIGHQVERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQP
        ++  K + +  + T     +K                                             ++   I  K K +R K   KP+P + + + F QP
Subjt:  LSRMKRKFSVLINTEGSLKEKGHDLKYCKYHRVIGHQVERCFVLKDLILKLAMEGKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQP

Query:  RQPVTLNEFFSKTF---HKKEKGNFVTSYCIDV----------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRL
        R+ +TL EF  + F   H +E       +  ++          EEVDNS + +QRTSVFDRIKP TTR  VFQR+SM   EEENQC  ST  R SAF+RL
Subjt:  RQPVTLNEFFSKTF---HKKEKGNFVTSYCIDV----------EEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRPSAFQRL

Query:  SVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIIFTNPTSQGSDQDHDEDK
        S+STSKK +PSTS FDRLK+TN+Q KR+  + +   F E N D K+ S + SRMKRK SV INTEGSL VKP  IIFTNP ++G ++  DE+K
Subjt:  SVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIIFTNPTSQGSDQDHDEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTCTCACTGAACTCTC
TTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTCGAAGAACTAGCAACTTGTGCCCACGATATGGAGC
TAAGTATTGCTAGTCGAGAAAACCAAGACCTTATACTCCCTGACATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAGAATCTATAGTTGTCAACACAACCCTT
CCCAAGTCATCTTCGAAAGAAAAACGACAAATGAATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATTTATCCTTTCCCTGATGCCGACATCCCTGATAT
GTTGGAACAACTATTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAAGTATTGCAAGTATCATCGAGTTATTG
GTCATCAAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGTTACA
ATCAAAGGAAAGAGCAAATATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAGGAAGAGAAGTAAAGAGTTTTCTCAACCTCGACAACCGGTGACTTTGAATGA
ATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCTAAGAAGGATGAACAAAGGACCTCCG
TCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCTGTTCGACCT
TCAGCTTTCCAAAGGTTAAGTGTCTCCACATCGAAGAAAATTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACGAACGATCAACCTAAAAGAAAGAGGGATAA
CTTGGAGGTGAATCTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCTGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCT
TGAAGGAGAAAGGTCATGATCTCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCAAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAA
GGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGTTACAATCAAAGGAAAGAGCAAATATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAG
GAAGAGAAGTAAAGAGTTTTCTCAACCTCGACAACCGGTGACTTTGAATGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCA
TCGACGTAGAAGAAGTTGACAATTCTAAGAAGGATGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATG
GTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCTGTTCGACCTTCAGCTTTCCAAAGGTTAAGTGTCTCCACATCGAAGAAAATTCAACCTTCAACATCTGT
TTTTGATCGCCTCAAAGTAACGAACGATCAACCTAAAAGAAAGAGGGATAACTTGGAGGTGAATCTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCC
TGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTTACCAATCCTACAAGTCAAGGATCTGATCAA
GACCATGATGAAGATAAGGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGAGCTCACCAACACTAAACAACGAAAAGGTGAACTCGTTGTTAACTATATAAATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTCTCACTGAACTCTC
TTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTCGAAGAACTAGCAACTTGTGCCCACGATATGGAGC
TAAGTATTGCTAGTCGAGAAAACCAAGACCTTATACTCCCTGACATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAGAATCTATAGTTGTCAACACAACCCTT
CCCAAGTCATCTTCGAAAGAAAAACGACAAATGAATGGAGCGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATTTATCCTTTCCCTGATGCCGACATCCCTGATAT
GTTGGAACAACTATTGGAAGCGCAACTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCTCAAGTATTGCAAGTATCATCGAGTTATTG
GTCATCAAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAAGGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGTTACA
ATCAAAGGAAAGAGCAAATATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAGGAAGAGAAGTAAAGAGTTTTCTCAACCTCGACAACCGGTGACTTTGAATGA
ATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCTAAGAAGGATGAACAAAGGACCTCCG
TCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATGGTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCTGTTCGACCT
TCAGCTTTCCAAAGGTTAAGTGTCTCCACATCGAAGAAAATTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACGAACGATCAACCTAAAAGAAAGAGGGATAA
CTTGGAGGTGAATCTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCTGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCT
TGAAGGAGAAAGGTCATGATCTCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCAAGTGGAAAGATGTTTCGTCCTAAAGGACTTAATTCTAAAGCTAGCTATGGAA
GGAAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGTTACAATCAAAGGAAAGAGCAAATATCAAAGAAAGAAGAATCCTAAGAAACCTCAACCTAAGAG
GAAGAGAAGTAAAGAGTTTTCTCAACCTCGACAACCGGTGACTTTGAATGAATTCTTCTCCAAAACTTTCCACAAAAAGGAAAAAGGAAACTTTGTGACTTCCTACTGCA
TCGACGTAGAAGAAGTTGACAATTCTAAGAAGGATGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCAGTATTCCAAAGAATGAGTATG
GTCGCGACAGAAGAAGAAAATCAATGTTCGGTGTCCACCTCTGTTCGACCTTCAGCTTTCCAAAGGTTAAGTGTCTCCACATCGAAGAAAATTCAACCTTCAACATCTGT
TTTTGATCGCCTCAAAGTAACGAACGATCAACCTAAAAGAAAGAGGGATAACTTGGAGGTGAATCTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCC
TGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTTACCAATCCTACAAGTCAAGGATCTGATCAA
GACCATGATGAAGATAAGGGCTTTTAA
Protein sequenceShow/hide protein sequence
MFELTNTKQRKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATCAHDMELSIASRENQDLILPDMRKEGRNDEETIEESIVVNTTL
PKSSSKEKRQMNGAHHLTLKERQKKIYPFPDADIPDMLEQLLEAQLIELPKCKRPEEMEKVDDLKYCKYHRVIGHQVERCFVLKDLILKLAMEGKIELDLDEVAQSNLVT
IKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFVTSYCIDVEEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSMVATEEENQCSVSTSVRP
SAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKEKGHDLKYCKYHRVIGHQVERCFVLKDLILKLAME
GKIELDLDEVAQSNLVTIKGKSKYQRKKNPKKPQPKRKRSKEFSQPRQPVTLNEFFSKTFHKKEKGNFVTSYCIDVEEVDNSKKDEQRTSVFDRIKPPTTRPSVFQRMSM
VATEEENQCSVSTSVRPSAFQRLSVSTSKKIQPSTSVFDRLKVTNDQPKRKRDNLEVNLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIIFTNPTSQGSDQ
DHDEDKGF