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Lag0038808 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0038808
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr2:27330687..27331923
RNA-Seq ExpressionLag0038808
SyntenyLag0038808
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]7.1e-1039.6Show/hide
Query:  PLVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVK
        P V     GLR+ ++   + +    PS   M+ AL+ VA  G++W  +  K   L P +LK  + VWL F+K  LMPT H++TIS++R+MLLYCIM+ + 
Subjt:  PLVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVK

Query:  I
        +
Subjt:  I

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]4.6e-0940Show/hide
Query:  LVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKI
        +V+ FY G         +V+ R  PS   M+EAL+ VA    +W  +  K   L   +L  E+ VWL F+K +LMPT H++TIS +R+MLLYCIM+ + +
Subjt:  LVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKI

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.1e-1024.03Show/hide
Query:  PQEAVVPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWL
        P++ +VPLV+EFY  L     + V VRG    W                       N + + +   L+ VA  G +W  S     + + S L P + VW 
Subjt:  PQEAVVPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWL

Query:  HFLKNRLMPTTHESTISVDRVMLLYCIMKGVKIVPG----------------------------KDEECHFFKPTIDLSLIGKLEQNSIQRKDKASTTQA
        HFLK+RL+PTTH  T+S DR++LL+ ++ G  I  G                            ++    F      L   G+++  ++ R  +   T++
Subjt:  HFLKNRLMPTTHESTISVDRVMLLYCIMKGVKIVPG----------------------------KDEECHFFKPTIDLSLIGKLEQNSIQRKDKASTTQA

Query:  TPHSGSNMASPSQHTHFTGP-SPSSEALAIAYCQ-----------IDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEE
        T    S+  + +      G      +AL     Q           +       + +W Y+KERD A+++   +      P F  FP+ +L    +D D E
Subjt:  TPHSGSNMASPSQHTHFTGP-SPSSEALAIAYCQ-----------IDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEE

Query:  NEVNDDED
         E   D+D
Subjt:  NEVNDDED

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.9e-1024.48Show/hide
Query:  VPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKN
        +PLV+EFY  L     + + VRG    W                       N +  ++   L+ VA  G +W  S     + + S L P + VW HFLK+
Subjt:  VPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKN

Query:  RLMPTTHESTISVDRVMLLYCIMKGVKIVPGK-----------DEECHFFKPTI---------------DLSLIGKLEQNSIQRKDKASTTQATPHSGSN
        RL+PTTH   +S DR++LL+ ++ G  I  G+            +    F P++                L   G+++  ++ R  +   T++T    S+
Subjt:  RLMPTTHESTISVDRVMLLYCIMKGVKIVPGK-----------DEECHFFKPTI---------------DLSLIGKLEQNSIQRKDKASTTQATPHSGSN

Query:  MASPSQHTHFTGP-SPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEENEVNDDED
          + +  +   G      +AL     Q +      + +W Y+KERD A+++   +      P F  FP+ +L    +D D E E   D+D
Subjt:  MASPSQHTHFTGP-SPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEENEVNDDED

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]7.9e-0940.26Show/hide
Query:  NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKI
        +P  ++M++AL+ +   G QW  S   +K+L  S L PE+ +W++ +K R++PT+H+ T+S DRVM  YCI  G+ I
Subjt:  NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKI

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)3.4e-1024.03Show/hide
Query:  PQEAVVPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWL
        P++ +VPLV+EFY  L     + V VRG    W                       N + + +   L+ VA  G +W  S     + + S L P + VW 
Subjt:  PQEAVVPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWL

Query:  HFLKNRLMPTTHESTISVDRVMLLYCIMKGVKIVPG----------------------------KDEECHFFKPTIDLSLIGKLEQNSIQRKDKASTTQA
        HFLK+RL+PTTH  T+S DR++LL+ ++ G  I  G                            ++    F      L   G+++  ++ R  +   T++
Subjt:  HFLKNRLMPTTHESTISVDRVMLLYCIMKGVKIVPG----------------------------KDEECHFFKPTIDLSLIGKLEQNSIQRKDKASTTQA

Query:  TPHSGSNMASPSQHTHFTGP-SPSSEALAIAYCQ-----------IDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEE
        T    S+  + +      G      +AL     Q           +       + +W Y+KERD A+++   +      P F  FP+ +L    +D D E
Subjt:  TPHSGSNMASPSQHTHFTGP-SPSSEALAIAYCQ-----------IDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEE

Query:  NEVNDDED
         E   D+D
Subjt:  NEVNDDED

A0A2P5DXM3 Uncharacterized protein9.1e-1124.48Show/hide
Query:  VPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKN
        +PLV+EFY  L     + + VRG    W                       N +  ++   L+ VA  G +W  S     + + S L P + VW HFLK+
Subjt:  VPLVQEFYVGLRKESISVVVVRG---RW-----------------------NPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKN

Query:  RLMPTTHESTISVDRVMLLYCIMKGVKIVPGK-----------DEECHFFKPTI---------------DLSLIGKLEQNSIQRKDKASTTQATPHSGSN
        RL+PTTH   +S DR++LL+ ++ G  I  G+            +    F P++                L   G+++  ++ R  +   T++T    S+
Subjt:  RLMPTTHESTISVDRVMLLYCIMKGVKIVPGK-----------DEECHFFKPTI---------------DLSLIGKLEQNSIQRKDKASTTQATPHSGSN

Query:  MASPSQHTHFTGP-SPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEENEVNDDED
          + +  +   G      +AL     Q +      + +W Y+KERD A+++   +      P F  FP+ +L    +D D E E   D+D
Subjt:  MASPSQHTHFTGP-SPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEENEVNDDED

A0A5A7TZE0 Protein MNN4-like3.4e-1039.6Show/hide
Query:  PLVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVK
        P V     GLR+ ++   + +    PS   M+ AL+ VA  G++W  +  K   L P +LK  + VWL F+K  LMPT H++TIS++R+MLLYCIM+ + 
Subjt:  PLVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVK

Query:  I
        +
Subjt:  I

A0A5D3DVQ6 Uncharacterized protein2.2e-0940Show/hide
Query:  LVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKI
        +V+ FY G         +V+ R  PS   M+EAL+ VA    +W  +  K   L   +L  E+ VWL F+K +LMPT H++TIS +R+MLLYCIM+ + +
Subjt:  LVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKI

A0A6A3CYH7 Eukaryotic translation initiation factor 3 subunit I5.0e-0927.36Show/hide
Query:  QWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGV-----KIVPGKDEECHFFKPTIDLS----LIGKLEQNSIQRKDK
        QW   Q   +++    L+P + +W HF+K++L+PT+H +T+S  R+  L+ I+ G      KI+  +   C   +P   L+    L+G  E    ++ + 
Subjt:  QWKESQTKVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGV-----KIVPGKDEECHFFKPTIDLS----LIGKLEQNSIQRKDK

Query:  ASTTQATPHSGSNMASPSQHTHFTGPSPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLL-PKEDEDSDEE-----
         S    TPH+ +             P    E +     Q++QL D + TY+ Y K RDE +   ++ I P        FP +LL P E+ ++ E+     
Subjt:  ASTTQATPHSGSNMASPSQHTHFTGPSPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLL-PKEDEDSDEE-----

Query:  -NEVNDDEDDEE
          EV+   D+EE
Subjt:  -NEVNDDEDDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGCAGTTCCTCCTACCGTCTCAGCCGTTAAGCCAAAGGGCAAATCACCTAAGGCTTCATCTCCTAAAAATCCATTCCCGAGAGTTCGTGAG
CAGGATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCACCCCAGGAGGCCGTAGTGCCATTAGTTCAAGAATTTTATGTCGGCCTGAGGAAAGAAAGCATT
AGCGTGGTGGTGGTGAGGGGAAGATGGAACCCTTCGACCAAGCAAATGAAGGAAGCTCTGAAACTTGTGGCCAATAAAGGGGTTCAATGGAAAGAGTCTCAGACG
AAGGTAAAGTCTCTAGTGCCAAGCGACCTAAAGCCAGAATCGGTAGTTTGGCTTCACTTTCTAAAGAATCGTTTGATGCCAACCACCCACGAAAGCACGATCTCA
GTGGATAGAGTGATGTTACTCTATTGTATCATGAAAGGGGTGAAGATCGTTCCAGGCAAGGATGAGGAGTGTCATTTCTTTAAGCCAACCATTGACCTGTCCTTG
ATCGGGAAGCTCGAGCAAAACAGTATTCAGAGGAAAGACAAAGCCTCCACAACTCAGGCTACTCCTCATTCAGGGTCGAACATGGCTTCTCCATCCCAGCACACT
CATTTTACAGGGCCCTCACCGTCATCGGAAGCCCTAGCTATTGCCTACTGCCAGATAGATCAACTCAAGGACAACCTGAGAACATATTGGCCATACGCAAAGGAG
CGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCCCCGGGTATTACTCCAGTCTTTCTTGGTTTCCCTCGATCGTTGCTGCCTAAGGAGGATGAGGATTCT
GATGAAGAGAATGAAGTGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAATGAGGACCAGGGGAGTTTTCTGACCCCTTACTTGCTGTTTTTTTGT
ACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGCAGTTCCTCCTACCGTCTCAGCCGTTAAGCCAAAGGGCAAATCACCTAAGGCTTCATCTCCTAAAAATCCATTCCCGAGAGTTCGTGAG
CAGGATCATTTCGCAGTACAAATGGCAGGACTTTTGTGCTCACCCCAGGAGGCCGTAGTGCCATTAGTTCAAGAATTTTATGTCGGCCTGAGGAAAGAAAGCATT
AGCGTGGTGGTGGTGAGGGGAAGATGGAACCCTTCGACCAAGCAAATGAAGGAAGCTCTGAAACTTGTGGCCAATAAAGGGGTTCAATGGAAAGAGTCTCAGACG
AAGGTAAAGTCTCTAGTGCCAAGCGACCTAAAGCCAGAATCGGTAGTTTGGCTTCACTTTCTAAAGAATCGTTTGATGCCAACCACCCACGAAAGCACGATCTCA
GTGGATAGAGTGATGTTACTCTATTGTATCATGAAAGGGGTGAAGATCGTTCCAGGCAAGGATGAGGAGTGTCATTTCTTTAAGCCAACCATTGACCTGTCCTTG
ATCGGGAAGCTCGAGCAAAACAGTATTCAGAGGAAAGACAAAGCCTCCACAACTCAGGCTACTCCTCATTCAGGGTCGAACATGGCTTCTCCATCCCAGCACACT
CATTTTACAGGGCCCTCACCGTCATCGGAAGCCCTAGCTATTGCCTACTGCCAGATAGATCAACTCAAGGACAACCTGAGAACATATTGGCCATACGCAAAGGAG
CGGGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGCCCCGGGTATTACTCCAGTCTTTCTTGGTTTCCCTCGATCGTTGCTGCCTAAGGAGGATGAGGATTCT
GATGAAGAGAATGAAGTGAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAATGAGGACCAGGGGAGTTTTCTGACCCCTTACTTGCTGTTTTTTTGT
ACATAA
Protein sequenceShow/hide protein sequence
MDASPAVPPTVSAVKPKGKSPKASSPKNPFPRVREQDHFAVQMAGLLCSPQEAVVPLVQEFYVGLRKESISVVVVRGRWNPSTKQMKEALKLVANKGVQWKESQT
KVKSLVPSDLKPESVVWLHFLKNRLMPTTHESTISVDRVMLLYCIMKGVKIVPGKDEECHFFKPTIDLSLIGKLEQNSIQRKDKASTTQATPHSGSNMASPSQHT
HFTGPSPSSEALAIAYCQIDQLKDNLRTYWPYAKERDEAIREFYLSIAPGITPVFLGFPRSLLPKEDEDSDEENEVNDDEDDEEKESSSNEDQGSFLTPYLLFFC
T